Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 5-141
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 24

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 118, 24

Conread position: 5-159
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 24

Conread position: 5-163
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 24

Conread position: 5-184
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 24

Conread position: 5-190
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 27

Conread position: 5-194
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 33

Conread position: 5-206
Cow position:
Alignm length: 207
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 24

Conread position: 5-214
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 15

Conread position: 5-216
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 24

Conread position: 5-222
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 24

Conread position: 5-223
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 118, 15

Conread position: 5-228
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 47

Conread position: 5-229
Cow position:
Alignm length: 240
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 24

Conread position: 5-231
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 202

Conread position: 5-238
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 111, 24

Conread position: 5-238
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 5-238
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 232

Conread position: 5-239
Cow position:
Alignm length: 240
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 24

Conread position: 5-241
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 142, 27

Conread position: 5-242
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 24

Conread position: 5-246
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 28

Conread position: 5-246
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 24

Conread position: 5-247
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 50

Conread position: 5-247
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 166

Conread position: 5-247
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 39

Conread position: 5-248
Cow position:
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-278
Cow position:
Alignm length: 287
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 5-281
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 209

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 39

Conread position: 5-282
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 49

Conread position: 5-283
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 143, 33

Conread position: 5-285
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 28

Conread position: 5-285
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 60, 27

Conread position: 5-285
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 50

Conread position: 5-286
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 27

Conread position: 5-290
Cow position:
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-291
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 17

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 24

Conread position: 5-291
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 119

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 5-292
Cow position:
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-293
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 24

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 27

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 121

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-293
Cow position:
Alignm length: 298
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 5-302
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 237

Conread position: 5-302
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 54, 33

Conread position: 5-302
Cow position:
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 160

Conread position: 5-303
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 5-303
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 40

Conread position: 5-304
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 27

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 5-304
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 15

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 49

Conread position: 5-305
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 24

Conread position: 5-305
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 27

Conread position: 5-305
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 208

Conread position: 5-307
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 118, 27

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 24

Conread position: 5-307
Cow position:
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-307
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-307
Cow position:
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 24

Conread position: 5-307
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 24

Conread position: 5-307
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 5-307
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 5-309
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 63, 22

Conread position: 5-309
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 5-309
Cow position:
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 5-315
Cow position:
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 5-315
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 39, 47

Conread position: 5-318
Cow position:
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-326
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 68, 28

Conread position: 6-291
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 17

Conread position: 6-302
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 22

Conread position: 6-304
Cow position:
Alignm length: 326
Alignm identity: 232
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 37, 23

Conread position: 6-304
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 31, 49

Conread position: 6-307
Cow position:
Alignm length: 306
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 23

Conread position: 6-322
Cow position:
Alignm length: 324
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 264

Conread position: 7-174
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 38

Conread position: 7-251
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 46

Conread position: 8-307
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 21

Conread position: 9-227
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 9-308
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 23

Conread position: 9-309
Cow position:
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 20

Conread position: 11-274
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 112, 18

Conread position: 11-309
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 13-291
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 23

Conread position: 18-307
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 186

Conread position: 26-251
Cow position:
Alignm length: 235
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 29-277
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 17

Conread position: 31-282
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 14

Conread position: 32-239
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 35-220
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 74

Conread position: 36-281
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 19

Conread position: 38-175
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 38-190
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 38-309
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 208

Conread position: 39-241
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 81, 16

Conread position: 39-269
Cow position:
Alignm length: 240
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 220

Conread position: 39-285
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 103

Conread position: 41-242
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 61

Conread position: 42-301
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 10

Conread position: 42-304
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 81, 10

Conread position: 43-229
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 43-302
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 71

Conread position: 43-308
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 9

Conread position: 44-294
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 8

Conread position: 45-285
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 46-315
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 74, 213

Conread position: 47-227
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 47-322
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 5

Conread position: 52-243
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 55-286
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 92, 58

Conread position: 55-293
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 126

Conread position: 59-304
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 174

Conread position: 80-291
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 43, 138

Conread position: 87-305
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 155

Conread position: 97-293
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 168

Conread position: 104-340
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 118

Conread position: 116-293
Cow position:
Alignm length: 185
Alignm identity: 155
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 147

Conread position: 146-304
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.