Cow genome map
| Conread name: | Spl1-SPL010001B10 |
| Conread position: | 5-141 |
| Cow position: | chr21:29214781-29214919 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-157 |
| Cow position: | chr21:29015766-29015917 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-159 |
| Cow position: | chr21:28625420-28625267 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-163 |
| Cow position: | chr21:12076028-12076187 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 5-184 |
| Cow position: | chr21:48108475-48108667 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 5-190 |
| Cow position: | chr21:39764228-39764034 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 5-194 |
| Cow position: | chr21:6619662-6619849 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 5-206 |
| Cow position: | chr21:15585021-15585224 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 5-214 |
| Cow position: | chr21:744002-744209 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 5-216 |
| Cow position: | chr21:26240958-26240750 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-222 |
| Cow position: | chr21:1765835-1766048 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-223 |
| Cow position: | chr21:25156982-25156761 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 118, 15 |
| Conread position: | 5-228 |
| Cow position: | chr21:13111420-13111650 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 5-229 |
| Cow position: | chr21:28028336-28028101 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 5-231 |
| Cow position: | chr21:45412-45174 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 202 |
| Conread position: | 5-238 |
| Cow position: | chr21:12153518-12153287 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 5-238 |
| Cow position: | chr21:18979461-18979703 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-238 |
| Cow position: | chr21:26829852-26830101 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 232 |
| Conread position: | 5-239 |
| Cow position: | chr21:38900149-38899915 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-241 |
| Cow position: | chr21:4035588-4035820 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 5-242 |
| Cow position: | chr21:25813720-25813948 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 117, 24 |
| Conread position: | 5-246 |
| Cow position: | chr21:37923880-37923629 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 5-246 |
| Cow position: | chr21:42364638-42364389 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 5-247 |
| Cow position: | chr21:30565449-30565198 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-247 |
| Cow position: | chr21:39508262-39508517 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 5-247 |
| Cow position: | chr21:44761980-44762228 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 5-248 |
| Cow position: | chr21:28210567-28210320 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 5-278 |
| Cow position: | chr21:42842582-42842861 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 5-281 |
| Cow position: | chr21:30595387-30595672 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 5-282 |
| Cow position: | chr21:149851-149564 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-282 |
| Cow position: | chr21:25190359-25190068 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 5-282 |
| Cow position: | chr21:31512567-31512853 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 39, 209 |
| Conread position: | 5-282 |
| Cow position: | chr21:33257260-33256973 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-282 |
| Cow position: | chr21:36534508-36534791 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 5-282 |
| Cow position: | chr21:47649045-47648757 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 5-283 |
| Cow position: | chr21:13300514-13300240 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 5-285 |
| Cow position: | chr21:16890140-16890426 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 5-285 |
| Cow position: | chr21:29423763-29423475 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 5-285 |
| Cow position: | chr21:48530875-48530580 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-286 |
| Cow position: | chr21:18818940-18819223 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 5-290 |
| Cow position: | chr21:28810877-28811174 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 5-291 |
| Cow position: | chr21:9209011-9208721 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 5-291 |
| Cow position: | chr21:22719396-22719690 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-291 |
| Cow position: | chr21:39059620-39059911 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 119 |
| Conread position: | 5-291 |
| Cow position: | chr21:43403734-43404029 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 5-292 |
| Cow position: | chr21:81448-81153 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 5-293 |
| Cow position: | chr21:4567646-4567358 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 24 |
| Conread position: | 5-293 |
| Cow position: | chr21:4791817-4791521 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 5-293 |
| Cow position: | chr21:6965768-6966066 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-293 |
| Cow position: | chr21:18829178-18829472 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 5-293 |
| Cow position: | chr21:22855601-22855319 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-293 |
| Cow position: | chr21:31276043-31275749 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 5-293 |
| Cow position: | chr21:37298845-37298546 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 5-293 |
| Cow position: | chr21:46830861-46831160 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 5-302 |
| Cow position: | chr21:4812640-4812941 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 39, 237 |
| Conread position: | 5-302 |
| Cow position: | chr21:26400065-26400369 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 5-302 |
| Cow position: | chr21:48196145-48195850 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 160 |
| Conread position: | 5-303 |
| Cow position: | chr21:2878135-2878444 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-303 |
| Cow position: | chr21:28259365-28259065 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-304 |
| Cow position: | chr21:1058175-1057857 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 5-304 |
| Cow position: | chr21:1196241-1195933 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 5-304 |
| Cow position: | chr21:3782476-3782168 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 5-304 |
| Cow position: | chr21:5020842-5020541 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 5-304 |
| Cow position: | chr21:10853969-10853660 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-304 |
| Cow position: | chr21:17144392-17144083 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-304 |
| Cow position: | chr21:27065895-27066204 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-304 |
| Cow position: | chr21:30966239-30966548 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-304 |
| Cow position: | chr21:32534516-32534221 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 5-304 |
| Cow position: | chr21:33316662-33316971 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-304 |
| Cow position: | chr21:33832272-33832584 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 5-304 |
| Cow position: | chr21:36376685-36376385 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 5-304 |
| Cow position: | chr21:42917497-42917188 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 5-304 |
| Cow position: | chr21:46974034-46974335 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 5-304 |
| Cow position: | chr21:49655480-49655788 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 5-305 |
| Cow position: | chr21:28476999-28476696 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 5-305 |
| Cow position: | chr21:29500235-29499932 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 5-305 |
| Cow position: | chr21:31252702-31252382 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 208 |
| Conread position: | 5-307 |
| Cow position: | chr21:4585974-4586287 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-307 |
| Cow position: | chr21:4732840-4733139 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 5-307 |
| Cow position: | chr21:21027163-21026866 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-307 |
| Cow position: | chr21:22463896-22463583 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-307 |
| Cow position: | chr21:28915272-28915583 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-307 |
| Cow position: | chr21:33983569-33983883 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 5-307 |
| Cow position: | chr21:34254891-34255186 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 5-307 |
| Cow position: | chr21:37147074-37147392 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 5-307 |
| Cow position: | chr21:47532437-47532126 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 5-309 |
| Cow position: | chr21:470994-470684 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 5-309 |
| Cow position: | chr21:20243896-20244210 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 5-309 |
| Cow position: | chr21:28908437-28908751 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 5-315 |
| Cow position: | chr21:2928171-2928490 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 5-315 |
| Cow position: | chr21:4541483-4541794 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 5-318 |
| Cow position: | chr21:2905089-2905411 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 5-326 |
| Cow position: | chr21:5642133-5642466 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 6-291 |
| Cow position: | chr21:2419899-2419605 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 6-302 |
| Cow position: | chr21:24887344-24887042 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 6-304 |
| Cow position: | chr21:27375823-27375501 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 6-304 |
| Cow position: | chr21:34684733-34684444 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 6-307 |
| Cow position: | chr21:25472876-25472591 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 6-322 |
| Cow position: | chr21:48234616-48234937 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 264 |
| Conread position: | 7-174 |
| Cow position: | chr21:33350075-33349900 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 7-251 |
| Cow position: | chr21:39700733-39700985 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 8-307 |
| Cow position: | chr21:38450304-38450596 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 9-227 |
| Cow position: | chr21:19974126-19973899 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 9-308 |
| Cow position: | chr21:4191994-4191686 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 9-309 |
| Cow position: | chr21:16768423-16768723 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 11-274 |
| Cow position: | chr21:23801749-23802013 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 11-309 |
| Cow position: | chr21:11509639-11509331 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 13-291 |
| Cow position: | chr21:9896054-9895770 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 18-307 |
| Cow position: | chr21:47360479-47360777 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 26-251 |
| Cow position: | chr21:10239705-10239939 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 29-277 |
| Cow position: | chr21:23448925-23448671 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 31-282 |
| Cow position: | chr21:10570966-10570704 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 32-239 |
| Cow position: | chr21:21411919-21412128 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 35-220 |
| Cow position: | chr21:13163082-13162898 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 36-281 |
| Cow position: | chr21:17721248-17720999 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 38-175 |
| Cow position: | chr21:33414162-33414302 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 38-190 |
| Cow position: | chr21:8890554-8890391 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 38-309 |
| Cow position: | chr21:34657660-34657384 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 10, 208 |
| Conread position: | 39-241 |
| Cow position: | chr21:21216808-21217015 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 39-269 |
| Cow position: | chr21:20263007-20263242 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 220 |
| Conread position: | 39-285 |
| Cow position: | chr21:24297404-24297651 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 103 |
| Conread position: | 41-242 |
| Cow position: | chr21:21000715-21000921 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 42-301 |
| Cow position: | chr21:44861933-44862195 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 42-304 |
| Cow position: | chr21:27608038-27608307 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 81, 10 |
| Conread position: | 43-229 |
| Cow position: | chr21:12571482-12571289 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 43-302 |
| Cow position: | chr21:26699020-26699271 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 43-308 |
| Cow position: | chr21:31974798-31974529 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 44-294 |
| Cow position: | chr21:2768180-2768438 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 45-285 |
| Cow position: | chr21:37323140-37323390 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 46-315 |
| Cow position: | chr21:6623474-6623195 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 74, 213 |
| Conread position: | 47-227 |
| Cow position: | chr21:29665329-29665514 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 47-322 |
| Cow position: | chr21:40267773-40268044 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 52-243 |
| Cow position: | chr21:8126625-8126823 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 55-286 |
| Cow position: | chr21:18791783-18792026 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 92, 58 |
| Conread position: | 55-293 |
| Cow position: | chr21:39400887-39400642 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 59-304 |
| Cow position: | chr21:28598238-28597987 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 174 |
| Conread position: | 80-291 |
| Cow position: | chr21:18846709-18846926 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 87-305 |
| Cow position: | chr21:25987034-25986810 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 33, 155 |
| Conread position: | 97-293 |
| Cow position: | chr21:38027229-38027024 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 104-340 |
| Cow position: | chr21:33420373-33420614 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 116-293 |
| Cow position: | chr21:14727275-14727093 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 7, 147 |
| Conread position: | 146-304 |
| Cow position: | chr21:3804226-3804385 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.