Cow genome map


           Conread name:
           Spl1-SPL010001B10
        

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               5-158
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               5-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-160
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               5-164
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               5-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               5-190
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               5-229
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               5-229
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               5-231
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               5-235
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 188
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-281
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               5-281
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               5-282
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               5-282
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               39, 193
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-302
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               5-303
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 39
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 228
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               39, 191
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-305
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               5-305
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               5-305
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               5-305
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               5-306
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 202
               

               Conread position:
               5-306
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 23
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               54, 39
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               5-310
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               5-315
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               5-316
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 24
               

               Conread position:
               6-176
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               6-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               6-304
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               6-304
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               38, 219
               

               Conread position:
               7-221
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               7-282
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               9-304
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               11-313
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               13-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               18-304
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               29-300
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               31-291
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               36-293
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               37-288
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               65, 140
               

               Conread position:
               39-308
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               40-293
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 129
               

               Conread position:
               40-306
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               40-325
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               41-286
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               42-293
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               52-336
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               71, 198
               

               Conread position:
               55-293
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               66-202
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               68-302
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               58, 130
               

               Conread position:
               75-302
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 214
               
Show alignments to all cow chromosomes.