Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 3-286
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 218

Conread position: 5-143
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 24

Conread position: 5-145
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 24

Conread position: 5-159
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 50

Conread position: 5-159
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 25

Conread position: 5-163
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 118, 24

Conread position: 5-175
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 24

Conread position: 5-178
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 50

Conread position: 5-179
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 28

Conread position: 5-184
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 27

Conread position: 5-188
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 24

Conread position: 5-201
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 50

Conread position: 5-202
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 25

Conread position: 5-214
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 27

Conread position: 5-229
Cow position:
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 5-238
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 50

Conread position: 5-242
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 28

Conread position: 5-242
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 24

Conread position: 5-247
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-250
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 24

Conread position: 5-259
Cow position:
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-262
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 24

Conread position: 5-267
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 5-278
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 24

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 286
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 39

Conread position: 5-285
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-285
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 5-285
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 24

Conread position: 5-285
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 119, 24

Conread position: 5-285
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 46, 24

Conread position: 5-285
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 24

Conread position: 5-286
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 5-286
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 118, 24

Conread position: 5-286
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 24

Conread position: 5-286
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 27

Conread position: 5-286
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 24

Conread position: 5-288
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 24

Conread position: 5-291
Cow position:
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-291
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 24

Conread position: 5-291
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 214

Conread position: 5-291
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 5-291
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 29

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 24

Conread position: 5-292
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 5-292
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-293
Cow position:
Alignm length: 297
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 108

Conread position: 5-293
Cow position:
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 39, 234

Conread position: 5-300
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 5-301
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 118, 24

Conread position: 5-301
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-302
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 118, 40

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 99

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 24

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 257

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 70, 24

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 19

Conread position: 5-304
Cow position:
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 24

Conread position: 5-305
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 107

Conread position: 5-309
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 28

Conread position: 5-312
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 39

Conread position: 5-335
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 6-335
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 28

Conread position: 9-228
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 5, 25

Conread position: 18-291
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 105, 37

Conread position: 18-298
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 11, 230

Conread position: 32-283
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 28, 235

Conread position: 36-285
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 178

Conread position: 38-183
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 38-309
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 188

Conread position: 39-229
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 95

Conread position: 40-304
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 40-331
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 95

Conread position: 42-242
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 45-230
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 16

Conread position: 52-287
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 107

Conread position: 52-304
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 67-301
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 213

Conread position: 89-304
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 118

Conread position: 194-293
Cow position:
Alignm length: 101
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 16

Show alignments to all cow chromosomes.