Cow genome map
| Conread name: | Spl1-SPL010001B10 |
| Conread position: | 2-307 |
| Cow position: | chr26:11269785-11269480 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 4-302 |
| Cow position: | chr26:20218814-20218516 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 4-308 |
| Cow position: | chr26:11370262-11369952 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 5-141 |
| Cow position: | chr26:30569560-30569700 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-163 |
| Cow position: | chr26:8746709-8746866 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-175 |
| Cow position: | chr26:14292205-14292027 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 5-178 |
| Cow position: | chr26:9867774-9867956 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 5-186 |
| Cow position: | chr26:13556646-13556830 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 5-190 |
| Cow position: | chr26:755805-755998 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 5-190 |
| Cow position: | chr26:4806704-4806510 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-190 |
| Cow position: | chr26:30652807-30652997 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 5-198 |
| Cow position: | chr26:7506905-7506713 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 5-214 |
| Cow position: | chr26:8653562-8653772 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-215 |
| Cow position: | chr26:14897658-14897439 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-217 |
| Cow position: | chr26:21538963-21538743 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-223 |
| Cow position: | chr26:15559056-15558829 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 5-231 |
| Cow position: | chr26:16720045-16719809 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 5-234 |
| Cow position: | chr26:6097998-6098232 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 5-235 |
| Cow position: | chr26:16905490-16905247 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 5-238 |
| Cow position: | chr26:13976537-13976777 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 5-239 |
| Cow position: | chr26:12965298-12965527 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 5-241 |
| Cow position: | chr26:8352294-8352066 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-267 |
| Cow position: | chr26:26281351-26281084 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 5-280 |
| Cow position: | chr26:17327738-17327447 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-282 |
| Cow position: | chr26:6843652-6843937 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 5-282 |
| Cow position: | chr26:9558300-9558597 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-282 |
| Cow position: | chr26:30725339-30725635 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-283 |
| Cow position: | chr26:7459392-7459682 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 39, 214 |
| Conread position: | 5-284 |
| Cow position: | chr26:20256188-20255905 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-285 |
| Cow position: | chr26:21859153-21858875 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 5-286 |
| Cow position: | chr26:10490809-10490523 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 5-291 |
| Cow position: | chr26:14487693-14487983 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 5-293 |
| Cow position: | chr26:3833604-3833306 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 5-293 |
| Cow position: | chr26:3862509-3862806 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 5-293 |
| Cow position: | chr26:8308183-8308492 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 5-293 |
| Cow position: | chr26:13183880-13183582 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 5-293 |
| Cow position: | chr26:24239262-24238973 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 5-295 |
| Cow position: | chr26:9836042-9835740 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 5-296 |
| Cow position: | chr26:30585788-30586086 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 5-304 |
| Cow position: | chr26:387250-386941 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 5-304 |
| Cow position: | chr26:8873415-8873107 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 5-304 |
| Cow position: | chr26:9115608-9115300 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-304 |
| Cow position: | chr26:12584968-12585277 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 5-304 |
| Cow position: | chr26:13773621-13773312 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 5-304 |
| Cow position: | chr26:17428905-17429214 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-304 |
| Cow position: | chr26:22831469-22831775 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-304 |
| Cow position: | chr26:26286429-26286120 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 5-305 |
| Cow position: | chr26:12662179-12662472 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 5-305 |
| Cow position: | chr26:22691955-22691650 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 125 |
| Conread position: | 5-305 |
| Cow position: | chr26:34015408-34015103 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 5-307 |
| Cow position: | chr26:17288384-17288068 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 5-307 |
| Cow position: | chr26:17393330-17393637 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 5-307 |
| Cow position: | chr26:25393357-25393044 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-311 |
| Cow position: | chr26:17169400-17169084 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 6-304 |
| Cow position: | chr26:3187319-3187020 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 9-280 |
| Cow position: | chr26:6476110-6476392 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 9-294 |
| Cow position: | chr26:798977-799258 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 11-293 |
| Cow position: | chr26:14173627-14173335 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 11-324 |
| Cow position: | chr26:19536622-19536305 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 18-293 |
| Cow position: | chr26:10698953-10699226 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 25-245 |
| Cow position: | chr26:5767445-5767221 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 29-232 |
| Cow position: | chr26:15516730-15516937 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 31-307 |
| Cow position: | chr26:15199571-15199286 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 37, 209 |
| Conread position: | 37-231 |
| Cow position: | chr26:23318051-23317848 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 40-239 |
| Cow position: | chr26:6082593-6082797 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 158 |
| Conread position: | 40-248 |
| Cow position: | chr26:614659-614874 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 187 |
| Conread position: | 40-304 |
| Cow position: | chr26:1885541-1885274 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 40-306 |
| Cow position: | chr26:25340406-25340677 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 50-293 |
| Cow position: | chr26:16781695-16781446 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 50-311 |
| Cow position: | chr26:2740083-2740358 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 52, 247 |
| Conread position: | 52-289 |
| Cow position: | chr26:30603713-30603966 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 55-307 |
| Cow position: | chr26:9063602-9063343 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 58-325 |
| Cow position: | chr26:2670305-2670577 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 169 |
| Conread position: | 67-283 |
| Cow position: | chr26:624711-624930 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 54, 132 |
Show alignments to all cow chromosomes.