Cow genome map
Conread name: | Spl1-SPL010001B10 |
Conread position: | 2-159 |
Cow position: | chr27:9989351-9989511 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 42, 53 |
Conread position: | 2-322 |
Cow position: | chr27:1502042-1501712 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 47 |
Conread position: | 5-139 |
Cow position: | chr27:12190799-12190661 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 46, 24 |
Conread position: | 5-145 |
Cow position: | chr27:8187357-8187218 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 118, 28 |
Conread position: | 5-146 |
Cow position: | chr27:30176988-30177133 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 5-159 |
Cow position: | chr27:13844188-13844345 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 54, 24 |
Conread position: | 5-170 |
Cow position: | chr27:23454500-23454331 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 117, 24 |
Conread position: | 5-208 |
Cow position: | chr27:13409520-13409307 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 164 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 54, 24 |
Conread position: | 5-215 |
Cow position: | chr27:10324405-10324620 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 54, 29 |
Conread position: | 5-221 |
Cow position: | chr27:26856565-26856338 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 171 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 39, 47 |
Conread position: | 5-228 |
Cow position: | chr27:21283722-21283958 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 170 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 54, 23 |
Conread position: | 5-228 |
Cow position: | chr27:29811829-29811596 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 5-235 |
Cow position: | chr27:816238-816476 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 190 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 5-238 |
Cow position: | chr27:28984290-28984051 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 39, 126 |
Conread position: | 5-241 |
Cow position: | chr27:15033366-15033611 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 5-242 |
Cow position: | chr27:20810941-20810695 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 185 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 5-243 |
Cow position: | chr27:18954567-18954319 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 172 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 54, 24 |
Conread position: | 5-247 |
Cow position: | chr27:27291918-27291666 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 5-250 |
Cow position: | chr27:4834665-4834416 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 192 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 118, 33 |
Conread position: | 5-265 |
Cow position: | chr27:18559410-18559676 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 190 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 19, 13 |
Conread position: | 5-279 |
Cow position: | chr27:11490146-11489862 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 24 |
Conread position: | 5-282 |
Cow position: | chr27:8201461-8201173 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 209 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 60, 40 |
Conread position: | 5-282 |
Cow position: | chr27:11481456-11481169 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 5-282 |
Cow position: | chr27:13901648-13901362 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 211 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 5-282 |
Cow position: | chr27:19523185-19523470 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 207 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 71, 39 |
Conread position: | 5-282 |
Cow position: | chr27:26330457-26330170 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 209 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 38, 50 |
Conread position: | 5-285 |
Cow position: | chr27:24055207-24054941 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 5-286 |
Cow position: | chr27:15100164-15099876 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 218 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 54, 17 |
Conread position: | 5-291 |
Cow position: | chr27:27557323-27557031 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 24 |
Conread position: | 5-293 |
Cow position: | chr27:4805305-4805015 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 217 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 117, 24 |
Conread position: | 5-293 |
Cow position: | chr27:8592903-8592608 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 25 |
Conread position: | 5-293 |
Cow position: | chr27:10579468-10579174 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 39, 101 |
Conread position: | 5-293 |
Cow position: | chr27:12277633-12277337 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 88 |
Conread position: | 5-293 |
Cow position: | chr27:25784239-25784527 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 24 |
Conread position: | 5-293 |
Cow position: | chr27:26644730-26645028 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 225 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 101, 24 |
Conread position: | 5-293 |
Cow position: | chr27:30306741-30307042 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 214 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 5-297 |
Cow position: | chr27:10383955-10383664 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 207 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 32, 49 |
Conread position: | 5-298 |
Cow position: | chr27:19388665-19388971 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 233 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 46, 24 |
Conread position: | 5-300 |
Cow position: | chr27:2682047-2681740 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 5-300 |
Cow position: | chr27:9090167-9089865 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 5-300 |
Cow position: | chr27:13182765-13183056 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 24 |
Conread position: | 5-300 |
Cow position: | chr27:26785340-26785038 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 24 |
Conread position: | 5-304 |
Cow position: | chr27:165395-165703 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 5-304 |
Cow position: | chr27:3232013-3232318 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 220 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 118, 27 |
Conread position: | 5-304 |
Cow position: | chr27:3653175-3653484 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 28 |
Conread position: | 5-304 |
Cow position: | chr27:3990276-3990584 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 49 |
Conread position: | 5-304 |
Cow position: | chr27:4331214-4331524 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 33, 50 |
Conread position: | 5-304 |
Cow position: | chr27:10306631-10306334 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 214 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 142, 18 |
Conread position: | 5-304 |
Cow position: | chr27:11256162-11256466 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 23 |
Conread position: | 5-304 |
Cow position: | chr27:13353831-13353522 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 5-304 |
Cow position: | chr27:15633818-15634126 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 5-304 |
Cow position: | chr27:21350372-21350064 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 24 |
Conread position: | 5-304 |
Cow position: | chr27:24295735-24296053 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 225 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 5-304 |
Cow position: | chr27:27930727-27930424 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 223 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 27, 198 |
Conread position: | 5-305 |
Cow position: | chr27:8972970-8972660 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 290 |
Conread position: | 5-307 |
Cow position: | chr27:2557469-2557776 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 60, 27 |
Conread position: | 5-310 |
Cow position: | chr27:8427383-8427068 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 225 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 34, 24 |
Conread position: | 6-192 |
Cow position: | chr27:28907709-28907900 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 117, 26 |
Conread position: | 8-285 |
Cow position: | chr27:21451968-21451677 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 9-291 |
Cow position: | chr27:25799774-25799486 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 211 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 114, 20 |
Conread position: | 9-300 |
Cow position: | chr27:13317076-13316779 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 20 |
Conread position: | 11-292 |
Cow position: | chr27:6523761-6524051 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 18 |
Conread position: | 15-285 |
Cow position: | chr27:1536685-1536403 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 14 |
Conread position: | 18-302 |
Cow position: | chr27:15406135-15405843 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 205 |
Conread position: | 29-304 |
Cow position: | chr27:30036367-30036085 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 7 |
Conread position: | 36-300 |
Cow position: | chr27:14669683-14669410 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 17 |
Conread position: | 40-304 |
Cow position: | chr27:5914415-5914149 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 187 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 40-304 |
Cow position: | chr27:19423886-19424161 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 198 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 36, 23 |
Conread position: | 40-306 |
Cow position: | chr27:1189154-1188882 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 192 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 18, 192 |
Conread position: | 41-303 |
Cow position: | chr27:20765223-20764965 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 120, 21 |
Conread position: | 41-306 |
Cow position: | chr27:21392498-21392225 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 155 |
Conread position: | 42-300 |
Cow position: | chr27:16331994-16332258 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 10 |
Conread position: | 42-306 |
Cow position: | chr27:30783388-30783117 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 10 |
Conread position: | 46-307 |
Cow position: | chr27:24239649-24239901 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 200 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 77, 6 |
Conread position: | 47-225 |
Cow position: | chr27:2936302-2936121 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 104, 72 |
Conread position: | 47-286 |
Cow position: | chr27:9262797-9263044 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 74, 5 |
Conread position: | 47-291 |
Cow position: | chr27:4982852-4982601 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 76, 5 |
Conread position: | 49-286 |
Cow position: | chr27:17565163-17565400 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 173 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 74, 26 |
Conread position: | 50-293 |
Cow position: | chr27:4818891-4818642 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 11, 91 |
Conread position: | 66-316 |
Cow position: | chr27:16787836-16788094 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 191 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 80-307 |
Cow position: | chr27:15375250-15375027 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 181 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 43, 11 |
Conread position: | 122-307 |
Cow position: | chr27:25971195-25971388 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 146 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 38, 86 |
Show alignments to all cow chromosomes.