Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 2-218
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 4-291
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 51

Conread position: 5-145
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 27

Conread position: 5-145
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 5-159
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 50

Conread position: 5-159
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 5-181
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 48

Conread position: 5-183
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 24

Conread position: 5-189
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 21

Conread position: 5-190
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 5-199
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 5-204
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 13

Conread position: 5-219
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 24

Conread position: 5-223
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 118, 39

Conread position: 5-223
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 179

Conread position: 5-225
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 24

Conread position: 5-227
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 24

Conread position: 5-228
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 62, 12

Conread position: 5-233
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 40

Conread position: 5-235
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 27

Conread position: 5-235
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 142, 24

Conread position: 5-236
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 23

Conread position: 5-238
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 24

Conread position: 5-242
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 25

Conread position: 5-246
Cow position:
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 5-247
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 50

Conread position: 5-247
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 24

Conread position: 5-248
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-255
Cow position:
Alignm length: 261
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 5-267
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 63, 24

Conread position: 5-282
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 29

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 218

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 48, 0

Conread position: 5-282
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 29

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-283
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 24

Conread position: 5-285
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-285
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 28

Conread position: 5-285
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 245

Conread position: 5-286
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 33

Conread position: 5-288
Cow position:
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 5-289
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 24

Conread position: 5-290
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 262

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 5-291
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 46, 24

Conread position: 5-291
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 156, 39

Conread position: 5-293
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 24

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 5-293
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 24

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-293
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-293
Cow position:
Alignm length: 297
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-293
Cow position:
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 5-293
Cow position:
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 106

Conread position: 5-293
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 69, 28

Conread position: 5-298
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 40

Conread position: 5-298
Cow position:
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-302
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 24

Conread position: 5-302
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 51, 27

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 52

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 6

Conread position: 5-304
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 39, 160

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 69, 23

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-305
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 24

Conread position: 5-305
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 24

Conread position: 5-305
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 24

Conread position: 5-306
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-306
Cow position:
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 5-307
Cow position:
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-307
Cow position:
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 200

Conread position: 5-307
Cow position:
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 24

Conread position: 5-307
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 50

Conread position: 5-307
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 119, 24

Conread position: 5-307
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 27

Conread position: 5-308
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 25

Conread position: 5-308
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 39, 289

Conread position: 5-319
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 263

Conread position: 6-221
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 27

Conread position: 6-282
Cow position:
Alignm length: 288
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 51, 23

Conread position: 6-291
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 6-293
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 23

Conread position: 6-294
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 7-263
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 8

Conread position: 7-303
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 7-304
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 7-304
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 37, 48

Conread position: 8-292
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 51, 20

Conread position: 8-304
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 57, 37

Conread position: 11-308
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 105, 18

Conread position: 13-249
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 34

Conread position: 20-291
Cow position:
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 5

Conread position: 20-300
Cow position:
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 5

Conread position: 23-229
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 96, 29

Conread position: 31-280
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 31-304
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 92, 0

Conread position: 36-304
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 8, 36

Conread position: 38-306
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 39-232
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 118, 80

Conread position: 39-304
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 13

Conread position: 40-282
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 40-291
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 82, 210

Conread position: 40-293
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 42-293
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 77, 10

Conread position: 45-267
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 7

Conread position: 46-242
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 6

Conread position: 47-242
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 47-286
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 47-307
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 221

Conread position: 49-234
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 150

Conread position: 50-293
Cow position:
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 13

Conread position: 52-234
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 52-340
Cow position:
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 81

Conread position: 59-232
Cow position:
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 81

Conread position: 61-293
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 66-310
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 74-222
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 75-282
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 75-293
Cow position:
Alignm length: 227
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 166

Conread position: 156-297
Cow position:
Alignm length: 142
Alignm identity: 125
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 0

Conread position: 189-332
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 26

Show alignments to all cow chromosomes.