Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 2-292
Cow position:
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 2-293
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 5-163
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 24

Conread position: 5-188
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 27

Conread position: 5-189
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 24

Conread position: 5-193
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 42

Conread position: 5-204
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 24

Conread position: 5-205
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 202

Conread position: 5-207
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 66, 24

Conread position: 5-210
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 5-227
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 28

Conread position: 5-232
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-232
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 5-233
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 27

Conread position: 5-233
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 24

Conread position: 5-234
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 5-235
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 39, 27

Conread position: 5-236
Cow position:
Alignm length: 239
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 24

Conread position: 5-238
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 47

Conread position: 5-238
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 60, 27

Conread position: 5-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 120, 21

Conread position: 5-241
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 54, 24

Conread position: 5-247
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 168, 27

Conread position: 5-247
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 211

Conread position: 5-248
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 39

Conread position: 5-248
Cow position:
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 24

Conread position: 5-265
Cow position:
Alignm length: 265
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-277
Cow position:
Alignm length: 286
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 24

Conread position: 5-281
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 118, 27

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 49

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 27

Conread position: 5-282
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 39, 176

Conread position: 5-282
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-282
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 49

Conread position: 5-283
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 23

Conread position: 5-286
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 24

Conread position: 5-286
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 5-286
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 5-291
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 5-291
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 5-291
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 29

Conread position: 5-291
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 24

Conread position: 5-291
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 116, 13

Conread position: 5-291
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 19, 50

Conread position: 5-291
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 41

Conread position: 5-291
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 25

Conread position: 5-292
Cow position:
Alignm length: 296
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 70, 24

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 49

Conread position: 5-293
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position:
Alignm length: 303
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-302
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 5-302
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 32

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 100

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 49

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 253

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 49

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 24

Conread position: 5-304
Cow position:
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 99

Conread position: 5-304
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 234

Conread position: 5-304
Cow position:
Alignm length: 312
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 33

Conread position: 5-304
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 118, 28

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-304
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 24

Conread position: 5-304
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 63, 39

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 72

Conread position: 5-305
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 5-306
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-307
Cow position:
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 5-307
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 228

Conread position: 5-309
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 40, 11

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 24

Conread position: 5-324
Cow position:
Alignm length: 328
Alignm identity: 235
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 118, 24

Conread position: 5-324
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 48

Conread position: 5-324
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 50

Conread position: 5-331
Cow position:
Alignm length: 346
Alignm identity: 235
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 24

Conread position: 5-334
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 6-159
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 23

Conread position: 6-228
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 6-238
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 22

Conread position: 6-282
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 49

Conread position: 6-288
Cow position:
Alignm length: 292
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 6-302
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 49

Conread position: 6-303
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 117, 19

Conread position: 6-305
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 38

Conread position: 7-307
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 191

Conread position: 8-212
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 36

Conread position: 8-229
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 195

Conread position: 8-239
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 24

Conread position: 13-221
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 32

Conread position: 29-232
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 34-305
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 39-181
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 39-291
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 150

Conread position: 40-290
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 41-251
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 42-324
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 8

Conread position: 45-224
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 7

Conread position: 52-243
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 53

Conread position: 52-307
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 65

Conread position: 56-238
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 56-304
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 67, 180

Conread position: 56-327
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 0

Conread position: 62-292
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 75-293
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 122-302
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 109

Show alignments to all cow chromosomes.