Cow genome map
| Conread name: | Spl1-SPL010001B10 | 
| Conread position: | 2-285 | 
| Cow position: | chr3:77448431-77448151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 120, 30 | 
| Conread position: | 3-239 | 
| Cow position: | chr3:33469208-33469455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 34, 24 | 
| Conread position: | 5-141 | 
| Cow position: | chr3:56302351-56302489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 44, 24 | 
| Conread position: | 5-145 | 
| Cow position: | chr3:67021550-67021689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 111, 24 | 
| Conread position: | 5-145 | 
| Cow position: | chr3:77187737-77187598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 41 | 
| Conread position: | 5-152 | 
| Cow position: | chr3:54959188-54959038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-159 | 
| Cow position: | chr3:34027308-34027464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 21, 49 | 
| Conread position: | 5-159 | 
| Cow position: | chr3:37009290-37009444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 118, 27 | 
| Conread position: | 5-159 | 
| Cow position: | chr3:61242838-61242681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-170 | 
| Cow position: | chr3:44536517-44536682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 48, 27 | 
| Conread position: | 5-173 | 
| Cow position: | chr3:15379755-15379930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 79 | 
| Conread position: | 5-175 | 
| Cow position: | chr3:13115021-13115189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 117, 24 | 
| Conread position: | 5-177 | 
| Cow position: | chr3:75157901-75158074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-181 | 
| Cow position: | chr3:45700117-45699936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 54, 15 | 
| Conread position: | 5-183 | 
| Cow position: | chr3:73765190-73765380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 21, 53 | 
| Conread position: | 5-186 | 
| Cow position: | chr3:49121096-49121280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 5-186 | 
| Cow position: | chr3:75479324-75479127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 20, 47 | 
| Conread position: | 5-194 | 
| Cow position: | chr3:44255143-44255341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 54, 23 | 
| Conread position: | 5-195 | 
| Cow position: | chr3:11334408-11334605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-198 | 
| Cow position: | chr3:54608557-54608754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 59, 24 | 
| Conread position: | 5-203 | 
| Cow position: | chr3:523660-523454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 117, 24 | 
| Conread position: | 5-203 | 
| Cow position: | chr3:63276072-63276274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 39, 48 | 
| Conread position: | 5-204 | 
| Cow position: | chr3:77366251-77366459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 62, 24 | 
| Conread position: | 5-205 | 
| Cow position: | chr3:48599984-48599785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-211 | 
| Cow position: | chr3:37020768-37020975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 118, 28 | 
| Conread position: | 5-213 | 
| Cow position: | chr3:45947070-45947286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 69, 24 | 
| Conread position: | 5-216 | 
| Cow position: | chr3:11018898-11018688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-217 | 
| Cow position: | chr3:81374796-81375017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-220 | 
| Cow position: | chr3:57456403-57456176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 43, 27 | 
| Conread position: | 5-221 | 
| Cow position: | chr3:63176797-63176579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-222 | 
| Cow position: | chr3:16332880-16332650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 66, 24 | 
| Conread position: | 5-228 | 
| Cow position: | chr3:19216356-19216123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-230 | 
| Cow position: | chr3:16005346-16005584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-233 | 
| Cow position: | chr3:51256394-51256156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 60, 28 | 
| Conread position: | 5-237 | 
| Cow position: | chr3:3031686-3031446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-238 | 
| Cow position: | chr3:18252998-18252761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-238 | 
| Cow position: | chr3:56148751-56148509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-240 | 
| Cow position: | chr3:21100259-21100017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 53, 39 | 
| Conread position: | 5-241 | 
| Cow position: | chr3:173953-173713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-241 | 
| Cow position: | chr3:5445372-5445615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 47, 188 | 
| Conread position: | 5-242 | 
| Cow position: | chr3:14453112-14452872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 31, 15 | 
| Conread position: | 5-245 | 
| Cow position: | chr3:302677-302426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 5-247 | 
| Cow position: | chr3:16156971-16156727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 118, 18 | 
| Conread position: | 5-247 | 
| Cow position: | chr3:19959050-19958798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 5-247 | 
| Cow position: | chr3:35620016-35619756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 5-247 | 
| Cow position: | chr3:36595154-36594902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 27 | 
| Conread position: | 5-247 | 
| Cow position: | chr3:64293976-64293729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 5-249 | 
| Cow position: | chr3:21082316-21082074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 7e-34 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-257 | 
| Cow position: | chr3:46349689-46349421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 45, 27 | 
| Conread position: | 5-264 | 
| Cow position: | chr3:16716382-16716646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 20, 49 | 
| Conread position: | 5-266 | 
| Cow position: | chr3:77550421-77550143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 116, 24 | 
| Conread position: | 5-267 | 
| Cow position: | chr3:9290058-9289794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 117, 27 | 
| Conread position: | 5-274 | 
| Cow position: | chr3:73763178-73763454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 21 | 
| Conread position: | 5-277 | 
| Cow position: | chr3:33326838-33326562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-278 | 
| Cow position: | chr3:38096356-38096072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-278 | 
| Cow position: | chr3:45881189-45880916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 28 | 
| Conread position: | 5-280 | 
| Cow position: | chr3:12750352-12750070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-280 | 
| Cow position: | chr3:67745316-67745611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-281 | 
| Cow position: | chr3:5887339-5887056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-281 | 
| Cow position: | chr3:45977955-45977669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 32, 50 | 
| Conread position: | 5-281 | 
| Cow position: | chr3:59864935-59864649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:17864885-17864598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 40, 50 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:33124803-33125086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 27 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:38870021-38869736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:40826852-40826565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:47272423-47272710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:48603717-48603421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:53519246-53518972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 118, 40 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:56644875-56645162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 32, 50 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:73450858-73451145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-282 | 
| Cow position: | chr3:81101534-81101247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 38, 50 | 
| Conread position: | 5-283 | 
| Cow position: | chr3:7856877-7856589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-283 | 
| Cow position: | chr3:35056433-35056145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 26, 50 | 
| Conread position: | 5-284 | 
| Cow position: | chr3:21303137-21303398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-285 | 
| Cow position: | chr3:18886913-18886623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-285 | 
| Cow position: | chr3:37600187-37599900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 5-285 | 
| Cow position: | chr3:39327994-39327711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 24 | 
| Conread position: | 5-285 | 
| Cow position: | chr3:60932721-60932433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-285 | 
| Cow position: | chr3:69930381-69930670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 40, 50 | 
| Conread position: | 5-287 | 
| Cow position: | chr3:68043049-68043341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 40, 193 | 
| Conread position: | 5-288 | 
| Cow position: | chr3:31418983-31418697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 58, 24 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:226436-226726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:12676183-12676482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 27 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:18575168-18575455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 26 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:18814961-18814666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 54, 27 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:26993577-26993286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 24 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:35884661-35884961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 54, 9 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:54863167-54863463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 24 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:58034212-58034477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:59118323-59118619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:75038386-75038682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 5-291 | 
| Cow position: | chr3:84199225-84198942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 9 | 
| Conread position: | 5-292 | 
| Cow position: | chr3:37628338-37628050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 24 | 
| Conread position: | 5-292 | 
| Cow position: | chr3:62793633-62793914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 31 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:2866199-2866497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 28 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:3884735-3885041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 24 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:6897284-6896985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 24 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:15416922-15416624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:15988393-15988097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 24 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:21593738-21593442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 69, 28 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:26742418-26742715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 28 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:30938957-30938654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 24 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:31050565-31050847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 24 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:40101404-40101694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:40520484-40520782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 69, 28 | 
| Conread position: | 5-293 | 
| Cow position: | chr3:72174850-72175148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 28 | 
| Conread position: | 5-299 | 
| Cow position: | chr3:68500913-68500611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 50, 39 | 
| Conread position: | 5-300 | 
| Cow position: | chr3:30615485-30615790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 24 | 
| Conread position: | 5-302 | 
| Cow position: | chr3:6865105-6864807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 118, 39 | 
| Conread position: | 5-302 | 
| Cow position: | chr3:11384766-11384465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 10, 28 | 
| Conread position: | 5-302 | 
| Cow position: | chr3:17460669-17460371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 54, 21 | 
| Conread position: | 5-302 | 
| Cow position: | chr3:46506224-46505917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 5-302 | 
| Cow position: | chr3:61677988-61677684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 24 | 
| Conread position: | 5-303 | 
| Cow position: | chr3:14285182-14284882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-303 | 
| Cow position: | chr3:19883914-19883616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 39, 196 | 
| Conread position: | 5-303 | 
| Cow position: | chr3:42424047-42424347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 37, 15 | 
| Conread position: | 5-303 | 
| Cow position: | chr3:65473882-65473577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:3301084-3300789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 119, 27 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:3652847-3653140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 31, 24 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:7476464-7476773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:10244115-10243806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:11784815-11784510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:19753280-19753588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 49 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:19794641-19794945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:21178801-21179112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:24265654-24265345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:24432833-24432528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 39 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:26722360-26722665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 118, 23 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:28435246-28435552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 28 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:29391670-29391975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:31022130-31021829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 118, 29 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:31422666-31422980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:35919015-35918711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 39, 230 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:36874605-36874914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:37972482-37972181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 40, 13 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:42186925-42186616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 27 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:42846799-42846491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:43189821-43190123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 27 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:49416392-49416700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 49 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:50461761-50461468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 14, 25 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:50921492-50921186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 48, 24 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:53047344-53047646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 24 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:53879810-53880120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:59603257-59602948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:64376260-64376564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 54, 33 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:64654124-64653815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:64876228-64875920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:65085389-65085081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 28 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:65989365-65989067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 54, 39 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:75771679-75771988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 28 | 
| Conread position: | 5-304 | 
| Cow position: | chr3:78023984-78024289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 32, 50 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:2851790-2852091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:24442651-24442957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 39 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:40004054-40004340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:49907577-49907887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:57590785-57590491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 20, 134 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:57742966-57742657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 39, 27 | 
| Conread position: | 5-305 | 
| Cow position: | chr3:72669105-72669414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 24 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:6785769-6785461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 28 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:14280132-14279830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 28 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:19109019-19108701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 5, 25 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:37982910-37983222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 27 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:49336647-49336339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 26, 211 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:54086930-54087222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 118, 24 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:56697293-56696992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 5-307 | 
| Cow position: | chr3:66829493-66829795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 73, 27 | 
| Conread position: | 5-309 | 
| Cow position: | chr3:10371826-10371518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 24 | 
| Conread position: | 5-309 | 
| Cow position: | chr3:13275822-13276140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 5-309 | 
| Cow position: | chr3:14724568-14724261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 48 | 
| Conread position: | 5-309 | 
| Cow position: | chr3:14923107-14922794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 38, 49 | 
| Conread position: | 5-309 | 
| Cow position: | chr3:16226330-16226017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 28 | 
| Conread position: | 5-311 | 
| Cow position: | chr3:49541752-49542075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 7e-34 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-311 | 
| Cow position: | chr3:52725817-52726135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 105, 27 | 
| Conread position: | 5-314 | 
| Cow position: | chr3:39921491-39921808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 264 | 
| Conread position: | 5-316 | 
| Cow position: | chr3:46014234-46014549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 132, 27 | 
| Conread position: | 5-321 | 
| Cow position: | chr3:2365454-2365772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-322 | 
| Cow position: | chr3:32221166-32220841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 54, 24 | 
| Conread position: | 5-323 | 
| Cow position: | chr3:12797604-12797933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 294 | 
| Conread position: | 5-323 | 
| Cow position: | chr3:63219384-63219062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 47, 125 | 
| Conread position: | 5-331 | 
| Cow position: | chr3:23010807-23010471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 118, 40 | 
| Conread position: | 5-332 | 
| Cow position: | chr3:35612603-35612266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 5-340 | 
| Cow position: | chr3:20999616-20999963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 39, 50 | 
| Conread position: | 6-198 | 
| Cow position: | chr3:61278201-61278004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 53, 23 | 
| Conread position: | 6-285 | 
| Cow position: | chr3:16293460-16293745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 45, 23 | 
| Conread position: | 6-299 | 
| Cow position: | chr3:49388104-49387800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 23 | 
| Conread position: | 6-301 | 
| Cow position: | chr3:2904001-2904298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 26 | 
| Conread position: | 6-302 | 
| Cow position: | chr3:30321699-30321405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 117, 26 | 
| Conread position: | 6-303 | 
| Cow position: | chr3:42500516-42500220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 26 | 
| Conread position: | 6-304 | 
| Cow position: | chr3:73637334-73637027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 27 | 
| Conread position: | 7-230 | 
| Cow position: | chr3:80564253-80564017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 7-232 | 
| Cow position: | chr3:51490752-51490513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 34, 48 | 
| Conread position: | 7-248 | 
| Cow position: | chr3:2507188-2507438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 7-302 | 
| Cow position: | chr3:23286883-23287188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 48 | 
| Conread position: | 8-222 | 
| Cow position: | chr3:60891716-60891491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 59, 21 | 
| Conread position: | 8-291 | 
| Cow position: | chr3:76136774-76136478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 19 | 
| Conread position: | 9-286 | 
| Cow position: | chr3:14613479-14613197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 36, 20 | 
| Conread position: | 9-293 | 
| Cow position: | chr3:34392833-34393129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 83 | 
| Conread position: | 9-305 | 
| Cow position: | chr3:12668147-12667849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 105, 20 | 
| Conread position: | 9-307 | 
| Cow position: | chr3:64281873-64282172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 23 | 
| Conread position: | 9-324 | 
| Cow position: | chr3:56103191-56102866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 10-307 | 
| Cow position: | chr3:19717820-19718123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 26 | 
| Conread position: | 11-249 | 
| Cow position: | chr3:59607741-59607494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 49, 18 | 
| Conread position: | 11-309 | 
| Cow position: | chr3:42993429-42993735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 111, 21 | 
| Conread position: | 12-204 | 
| Cow position: | chr3:49132954-49133152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 47, 15 | 
| Conread position: | 13-293 | 
| Cow position: | chr3:58766587-58766301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 15 | 
| Conread position: | 14-249 | 
| Cow position: | chr3:57835210-57835446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 51, 10 | 
| Conread position: | 15-241 | 
| Cow position: | chr3:29282206-29281970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 44, 14 | 
| Conread position: | 16-246 | 
| Cow position: | chr3:18460254-18460490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 107, 47 | 
| Conread position: | 18-267 | 
| Cow position: | chr3:522020-521760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 12, 28 | 
| Conread position: | 18-305 | 
| Cow position: | chr3:601143-600857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 103, 18 | 
| Conread position: | 25-307 | 
| Cow position: | chr3:50347242-50346959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 30, 204 | 
| Conread position: | 27-307 | 
| Cow position: | chr3:18352938-18353227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 96, 28 | 
| Conread position: | 29-230 | 
| Cow position: | chr3:1299507-1299304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 92, 189 | 
| Conread position: | 32-293 | 
| Cow position: | chr3:13352713-13352970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 20 | 
| Conread position: | 32-330 | 
| Cow position: | chr3:8605483-8605789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 35-229 | 
| Cow position: | chr3:11411626-11411826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 81, 17 | 
| Conread position: | 36-233 | 
| Cow position: | chr3:71246019-71245813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 37-294 | 
| Cow position: | chr3:41315521-41315260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 85, 18 | 
| Conread position: | 37-307 | 
| Cow position: | chr3:82932040-82931767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 31, 39 | 
| Conread position: | 38-214 | 
| Cow position: | chr3:39970650-39970829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 85, 14 | 
| Conread position: | 38-293 | 
| Cow position: | chr3:4017924-4017664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 190 | 
| Conread position: | 38-293 | 
| Cow position: | chr3:52651533-52651783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 17, 195 | 
| Conread position: | 38-304 | 
| Cow position: | chr3:54653755-54654028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 85, 17 | 
| Conread position: | 38-309 | 
| Cow position: | chr3:34556958-34557228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 85, 24 | 
| Conread position: | 39-223 | 
| Cow position: | chr3:56718912-56719104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 39-286 | 
| Cow position: | chr3:73416423-73416162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 40-292 | 
| Cow position: | chr3:14633824-14634072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 81, 29 | 
| Conread position: | 40-302 | 
| Cow position: | chr3:25753673-25753403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 203 | 
| Conread position: | 41-291 | 
| Cow position: | chr3:34086782-34087038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 18, 79 | 
| Conread position: | 42-195 | 
| Cow position: | chr3:11446849-11446693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 81, 10 | 
| Conread position: | 42-293 | 
| Cow position: | chr3:52257109-52257357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 183 | 
| Conread position: | 42-302 | 
| Cow position: | chr3:77726853-77726604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 15, 67 | 
| Conread position: | 42-304 | 
| Cow position: | chr3:50204980-50204712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 81, 10 | 
| Conread position: | 43-293 | 
| Cow position: | chr3:70322259-70322515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 185 | 
| Conread position: | 43-304 | 
| Cow position: | chr3:34464779-34464514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 43-319 | 
| Cow position: | chr3:7677905-7677624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 9 | 
| Conread position: | 47-306 | 
| Cow position: | chr3:45615739-45615477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 75, 155 | 
| Conread position: | 47-318 | 
| Cow position: | chr3:17059052-17059322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 20, 211 | 
| Conread position: | 47-322 | 
| Cow position: | chr3:15082532-15082809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 170 | 
| Conread position: | 47-337 | 
| Cow position: | chr3:80818228-80817931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 76, 16 | 
| Conread position: | 52-217 | 
| Cow position: | chr3:9639607-9639778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 71, 147 | 
| Conread position: | 52-222 | 
| Cow position: | chr3:1831454-1831627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 71, 64 | 
| Conread position: | 52-222 | 
| Cow position: | chr3:67545233-67545409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 52-242 | 
| Cow position: | chr3:69207835-69208029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 31, 36 | 
| Conread position: | 52-307 | 
| Cow position: | chr3:77226128-77225877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 64 | 
| Conread position: | 54-266 | 
| Cow position: | chr3:35030372-35030593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 55-216 | 
| Cow position: | chr3:18996621-18996453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 55-304 | 
| Cow position: | chr3:49429366-49429607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 68, 56 | 
| Conread position: | 56-247 | 
| Cow position: | chr3:25057083-25056891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 101, 181 | 
| Conread position: | 56-292 | 
| Cow position: | chr3:59332984-59332741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 67, 17 | 
| Conread position: | 56-293 | 
| Cow position: | chr3:8391758-8391523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 69, 163 | 
| Conread position: | 58-307 | 
| Cow position: | chr3:15663048-15663300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 175 | 
| Conread position: | 65-304 | 
| Cow position: | chr3:48240645-48240399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 79, 54 | 
| Conread position: | 66-241 | 
| Cow position: | chr3:13291497-13291316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 67-247 | 
| Cow position: | chr3:33269615-33269430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 56, 62 | 
| Conread position: | 75-247 | 
| Cow position: | chr3:64135513-64135352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 48, 84 | 
| Conread position: | 83-293 | 
| Cow position: | chr3:38863095-38862882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 107 | 
| Conread position: | 85-309 | 
| Cow position: | chr3:74847807-74848029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 150 | 
| Conread position: | 103-309 | 
| Cow position: | chr3:10412603-10412388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 129-291 | 
| Cow position: | chr3:63238707-63238870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 103 | 
| Conread position: | 143-293 | 
| Cow position: | chr3:5972233-5972383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 99, 11 | 
| Conread position: | 156-293 | 
| Cow position: | chr3:82891322-82891189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 158-293 | 
| Cow position: | chr3:22339200-22339066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 85, 29 | 
| Conread position: | 188-318 | 
| Cow position: | chr3:64683751-64683880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 54, 37 | 
Show alignments to all cow chromosomes.
