Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 2-285
Cow position: chr3:77448431-77448151 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 30

Conread position: 3-239
Cow position: chr3:33469208-33469455 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 24

Conread position: 5-141
Cow position: chr3:56302351-56302489 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 24

Conread position: 5-145
Cow position: chr3:67021550-67021689 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 24

Conread position: 5-145
Cow position: chr3:77187737-77187598 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 41

Conread position: 5-152
Cow position: chr3:54959188-54959038 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 24

Conread position: 5-159
Cow position: chr3:34027308-34027464 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 49

Conread position: 5-159
Cow position: chr3:37009290-37009444 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 27

Conread position: 5-159
Cow position: chr3:61242838-61242681 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 24

Conread position: 5-170
Cow position: chr3:44536517-44536682 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 27

Conread position: 5-173
Cow position: chr3:15379755-15379930 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 79

Conread position: 5-175
Cow position: chr3:13115021-13115189 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 24

Conread position: 5-177
Cow position: chr3:75157901-75158074 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 24

Conread position: 5-181
Cow position: chr3:45700117-45699936 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 15

Conread position: 5-183
Cow position: chr3:73765190-73765380 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 53

Conread position: 5-186
Cow position: chr3:49121096-49121280 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 24

Conread position: 5-186
Cow position: chr3:75479324-75479127 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 47

Conread position: 5-194
Cow position: chr3:44255143-44255341 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 23

Conread position: 5-195
Cow position: chr3:11334408-11334605 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 46, 24

Conread position: 5-198
Cow position: chr3:54608557-54608754 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 24

Conread position: 5-203
Cow position: chr3:523660-523454 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 24

Conread position: 5-203
Cow position: chr3:63276072-63276274 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 48

Conread position: 5-204
Cow position: chr3:77366251-77366459 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 62, 24

Conread position: 5-205
Cow position: chr3:48599984-48599785 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 24

Conread position: 5-211
Cow position: chr3:37020768-37020975 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 28

Conread position: 5-213
Cow position: chr3:45947070-45947286 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 24

Conread position: 5-216
Cow position: chr3:11018898-11018688 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 24

Conread position: 5-217
Cow position: chr3:81374796-81375017 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 50

Conread position: 5-220
Cow position: chr3:57456403-57456176 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 27

Conread position: 5-221
Cow position: chr3:63176797-63176579 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 24

Conread position: 5-222
Cow position: chr3:16332880-16332650 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 24

Conread position: 5-228
Cow position: chr3:19216356-19216123 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 50

Conread position: 5-230
Cow position: chr3:16005346-16005584 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 24

Conread position: 5-233
Cow position: chr3:51256394-51256156 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 28

Conread position: 5-237
Cow position: chr3:3031686-3031446 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 24

Conread position: 5-238
Cow position: chr3:18252998-18252761 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-238
Cow position: chr3:56148751-56148509 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 54, 24

Conread position: 5-240
Cow position: chr3:21100259-21100017 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 39

Conread position: 5-241
Cow position: chr3:173953-173713 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 24

Conread position: 5-241
Cow position: chr3:5445372-5445615 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 188

Conread position: 5-242
Cow position: chr3:14453112-14452872 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 15

Conread position: 5-245
Cow position: chr3:302677-302426 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 5-247
Cow position: chr3:16156971-16156727 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 118, 18

Conread position: 5-247
Cow position: chr3:19959050-19958798 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 5-247
Cow position: chr3:35620016-35619756 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 5-247
Cow position: chr3:36595154-36594902 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 27

Conread position: 5-247
Cow position: chr3:64293976-64293729 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 24

Conread position: 5-249
Cow position: chr3:21082316-21082074 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 118, 24

Conread position: 5-257
Cow position: chr3:46349689-46349421 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 27

Conread position: 5-264
Cow position: chr3:16716382-16716646 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 49

Conread position: 5-266
Cow position: chr3:77550421-77550143 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 24

Conread position: 5-267
Cow position: chr3:9290058-9289794 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 27

Conread position: 5-274
Cow position: chr3:73763178-73763454 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 5-277
Cow position: chr3:33326838-33326562 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 118, 24

Conread position: 5-278
Cow position: chr3:38096356-38096072 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-278
Cow position: chr3:45881189-45880916 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 28

Conread position: 5-280
Cow position: chr3:12750352-12750070 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 24

Conread position: 5-280
Cow position: chr3:67745316-67745611 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 24

Conread position: 5-281
Cow position: chr3:5887339-5887056 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-281
Cow position: chr3:45977955-45977669 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 32, 50

Conread position: 5-281
Cow position: chr3:59864935-59864649 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr3:17864885-17864598 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 50

Conread position: 5-282
Cow position: chr3:33124803-33125086 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-282
Cow position: chr3:38870021-38869736 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 39

Conread position: 5-282
Cow position: chr3:40826852-40826565 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-282
Cow position: chr3:47272423-47272710 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 39

Conread position: 5-282
Cow position: chr3:48603717-48603421 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr3:53519246-53518972 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 40

Conread position: 5-282
Cow position: chr3:56644875-56645162 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 50

Conread position: 5-282
Cow position: chr3:73450858-73451145 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr3:81101534-81101247 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 50

Conread position: 5-283
Cow position: chr3:7856877-7856589 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 24

Conread position: 5-283
Cow position: chr3:35056433-35056145 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 50

Conread position: 5-284
Cow position: chr3:21303137-21303398 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 24

Conread position: 5-285
Cow position: chr3:18886913-18886623 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-285
Cow position: chr3:37600187-37599900 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 5-285
Cow position: chr3:39327994-39327711 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 24

Conread position: 5-285
Cow position: chr3:60932721-60932433 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-285
Cow position: chr3:69930381-69930670 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 50

Conread position: 5-287
Cow position: chr3:68043049-68043341 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 40, 193

Conread position: 5-288
Cow position: chr3:31418983-31418697 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 24

Conread position: 5-291
Cow position: chr3:226436-226726 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 24

Conread position: 5-291
Cow position: chr3:12676183-12676482 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 27

Conread position: 5-291
Cow position: chr3:18575168-18575455 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 5-291
Cow position: chr3:18814961-18814666 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 54, 27

Conread position: 5-291
Cow position: chr3:26993577-26993286 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 5-291
Cow position: chr3:35884661-35884961 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 54, 9

Conread position: 5-291
Cow position: chr3:54863167-54863463 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 5-291
Cow position: chr3:58034212-58034477 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 24

Conread position: 5-291
Cow position: chr3:59118323-59118619 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-291
Cow position: chr3:75038386-75038682 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 5-291
Cow position: chr3:84199225-84198942 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 5-292
Cow position: chr3:37628338-37628050 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 5-292
Cow position: chr3:62793633-62793914 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 31

Conread position: 5-293
Cow position: chr3:2866199-2866497 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr3:3884735-3885041 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 24

Conread position: 5-293
Cow position: chr3:6897284-6896985 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 5-293
Cow position: chr3:15416922-15416624 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 5-293
Cow position: chr3:15988393-15988097 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 5-293
Cow position: chr3:21593738-21593442 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr3:26742418-26742715 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 5-293
Cow position: chr3:30938957-30938654 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 5-293
Cow position: chr3:31050565-31050847 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 5-293
Cow position: chr3:40101404-40101694 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 5-293
Cow position: chr3:40520484-40520782 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr3:72174850-72175148 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-299
Cow position: chr3:68500913-68500611 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 39

Conread position: 5-300
Cow position: chr3:30615485-30615790 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 5-302
Cow position: chr3:6865105-6864807 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 118, 39

Conread position: 5-302
Cow position: chr3:11384766-11384465 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 28

Conread position: 5-302
Cow position: chr3:17460669-17460371 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 21

Conread position: 5-302
Cow position: chr3:46506224-46505917 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 39

Conread position: 5-302
Cow position: chr3:61677988-61677684 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 5-303
Cow position: chr3:14285182-14284882 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-303
Cow position: chr3:19883914-19883616 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 196

Conread position: 5-303
Cow position: chr3:42424047-42424347 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 15

Conread position: 5-303
Cow position: chr3:65473882-65473577 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 50

Conread position: 5-304
Cow position: chr3:3301084-3300789 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 119, 27

Conread position: 5-304
Cow position: chr3:3652847-3653140 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 24

Conread position: 5-304
Cow position: chr3:7476464-7476773 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:10244115-10243806 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 5-304
Cow position: chr3:11784815-11784510 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:19753280-19753588 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 5-304
Cow position: chr3:19794641-19794945 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-304
Cow position: chr3:21178801-21179112 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:24265654-24265345 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-304
Cow position: chr3:24432833-24432528 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 5-304
Cow position: chr3:26722360-26722665 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 118, 23

Conread position: 5-304
Cow position: chr3:28435246-28435552 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 28

Conread position: 5-304
Cow position: chr3:29391670-29391975 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-304
Cow position: chr3:31022130-31021829 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 29

Conread position: 5-304
Cow position: chr3:31422666-31422980 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:35919015-35918711 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 230

Conread position: 5-304
Cow position: chr3:36874605-36874914 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:37972482-37972181 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 13

Conread position: 5-304
Cow position: chr3:42186925-42186616 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 5-304
Cow position: chr3:42846799-42846491 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:43189821-43190123 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-304
Cow position: chr3:49416392-49416700 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 5-304
Cow position: chr3:50461761-50461468 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 25

Conread position: 5-304
Cow position: chr3:50921492-50921186 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 48, 24

Conread position: 5-304
Cow position: chr3:53047344-53047646 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 5-304
Cow position: chr3:53879810-53880120 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 5-304
Cow position: chr3:59603257-59602948 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:64376260-64376564 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 33

Conread position: 5-304
Cow position: chr3:64654124-64653815 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position: chr3:64876228-64875920 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr3:65085389-65085081 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-304
Cow position: chr3:65989365-65989067 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 54, 39

Conread position: 5-304
Cow position: chr3:75771679-75771988 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 5-304
Cow position: chr3:78023984-78024289 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 32, 50

Conread position: 5-305
Cow position: chr3:2851790-2852091 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 24

Conread position: 5-305
Cow position: chr3:24442651-24442957 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 5-305
Cow position: chr3:40004054-40004340 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 24

Conread position: 5-305
Cow position: chr3:49907577-49907887 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 5-305
Cow position: chr3:57590785-57590491 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 134

Conread position: 5-305
Cow position: chr3:57742966-57742657 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 27

Conread position: 5-305
Cow position: chr3:72669105-72669414 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 24

Conread position: 5-307
Cow position: chr3:6785769-6785461 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 28

Conread position: 5-307
Cow position: chr3:14280132-14279830 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 5-307
Cow position: chr3:19109019-19108701 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 25

Conread position: 5-307
Cow position: chr3:37982910-37983222 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-307
Cow position: chr3:49336647-49336339 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 211

Conread position: 5-307
Cow position: chr3:54086930-54087222 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 24

Conread position: 5-307
Cow position: chr3:56697293-56696992 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 24

Conread position: 5-307
Cow position: chr3:66829493-66829795 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 27

Conread position: 5-309
Cow position: chr3:10371826-10371518 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 24

Conread position: 5-309
Cow position: chr3:13275822-13276140 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 5-309
Cow position: chr3:14724568-14724261 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 48

Conread position: 5-309
Cow position: chr3:14923107-14922794 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 49

Conread position: 5-309
Cow position: chr3:16226330-16226017 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-311
Cow position: chr3:49541752-49542075 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 50

Conread position: 5-311
Cow position: chr3:52725817-52726135 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 27

Conread position: 5-314
Cow position: chr3:39921491-39921808 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 264

Conread position: 5-316
Cow position: chr3:46014234-46014549 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 132, 27

Conread position: 5-321
Cow position: chr3:2365454-2365772 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-322
Cow position: chr3:32221166-32220841 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 54, 24

Conread position: 5-323
Cow position: chr3:12797604-12797933 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 294

Conread position: 5-323
Cow position: chr3:63219384-63219062 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 125

Conread position: 5-331
Cow position: chr3:23010807-23010471 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 40

Conread position: 5-332
Cow position: chr3:35612603-35612266 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-340
Cow position: chr3:20999616-20999963 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 6-198
Cow position: chr3:61278201-61278004 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 23

Conread position: 6-285
Cow position: chr3:16293460-16293745 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 23

Conread position: 6-299
Cow position: chr3:49388104-49387800 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 23

Conread position: 6-301
Cow position: chr3:2904001-2904298 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 6-302
Cow position: chr3:30321699-30321405 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 117, 26

Conread position: 6-303
Cow position: chr3:42500516-42500220 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 6-304
Cow position: chr3:73637334-73637027 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 7-230
Cow position: chr3:80564253-80564017 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 22

Conread position: 7-232
Cow position: chr3:51490752-51490513 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 48

Conread position: 7-248
Cow position: chr3:2507188-2507438 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 7-302
Cow position: chr3:23286883-23287188 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 8-222
Cow position: chr3:60891716-60891491 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 21

Conread position: 8-291
Cow position: chr3:76136774-76136478 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 9-286
Cow position: chr3:14613479-14613197 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 20

Conread position: 9-293
Cow position: chr3:34392833-34393129 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 83

Conread position: 9-305
Cow position: chr3:12668147-12667849 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 105, 20

Conread position: 9-307
Cow position: chr3:64281873-64282172 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 23

Conread position: 9-324
Cow position: chr3:56103191-56102866 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 10-307
Cow position: chr3:19717820-19718123 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 11-249
Cow position: chr3:59607741-59607494 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 18

Conread position: 11-309
Cow position: chr3:42993429-42993735 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 21

Conread position: 12-204
Cow position: chr3:49132954-49133152 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 15

Conread position: 13-293
Cow position: chr3:58766587-58766301 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 15

Conread position: 14-249
Cow position: chr3:57835210-57835446 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 10

Conread position: 15-241
Cow position: chr3:29282206-29281970 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 14

Conread position: 16-246
Cow position: chr3:18460254-18460490 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 107, 47

Conread position: 18-267
Cow position: chr3:522020-521760 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 12, 28

Conread position: 18-305
Cow position: chr3:601143-600857 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 103, 18

Conread position: 25-307
Cow position: chr3:50347242-50346959 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 30, 204

Conread position: 27-307
Cow position: chr3:18352938-18353227 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 96, 28

Conread position: 29-230
Cow position: chr3:1299507-1299304 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 189

Conread position: 32-293
Cow position: chr3:13352713-13352970 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 20

Conread position: 32-330
Cow position: chr3:8605483-8605789 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 35-229
Cow position: chr3:11411626-11411826 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 17

Conread position: 36-233
Cow position: chr3:71246019-71245813 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 37-294
Cow position: chr3:41315521-41315260 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 18

Conread position: 37-307
Cow position: chr3:82932040-82931767 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 39

Conread position: 38-214
Cow position: chr3:39970650-39970829 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 14

Conread position: 38-293
Cow position: chr3:4017924-4017664 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 190

Conread position: 38-293
Cow position: chr3:52651533-52651783 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 195

Conread position: 38-304
Cow position: chr3:54653755-54654028 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 85, 17

Conread position: 38-309
Cow position: chr3:34556958-34557228 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 24

Conread position: 39-223
Cow position: chr3:56718912-56719104 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 39-286
Cow position: chr3:73416423-73416162 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 40-292
Cow position: chr3:14633824-14634072 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 29

Conread position: 40-302
Cow position: chr3:25753673-25753403 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 203

Conread position: 41-291
Cow position: chr3:34086782-34087038 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 79

Conread position: 42-195
Cow position: chr3:11446849-11446693 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 10

Conread position: 42-293
Cow position: chr3:52257109-52257357 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 183

Conread position: 42-302
Cow position: chr3:77726853-77726604 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 15, 67

Conread position: 42-304
Cow position: chr3:50204980-50204712 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 81, 10

Conread position: 43-293
Cow position: chr3:70322259-70322515 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 185

Conread position: 43-304
Cow position: chr3:34464779-34464514 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 43-319
Cow position: chr3:7677905-7677624 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 47-306
Cow position: chr3:45615739-45615477 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 155

Conread position: 47-318
Cow position: chr3:17059052-17059322 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 211

Conread position: 47-322
Cow position: chr3:15082532-15082809 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 170

Conread position: 47-337
Cow position: chr3:80818228-80817931 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 16

Conread position: 52-217
Cow position: chr3:9639607-9639778 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 71, 147

Conread position: 52-222
Cow position: chr3:1831454-1831627 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 64

Conread position: 52-222
Cow position: chr3:67545233-67545409 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 52-242
Cow position: chr3:69207835-69208029 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 36

Conread position: 52-307
Cow position: chr3:77226128-77225877 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 54-266
Cow position: chr3:35030372-35030593 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 55-216
Cow position: chr3:18996621-18996453 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 55-304
Cow position: chr3:49429366-49429607 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 56

Conread position: 56-247
Cow position: chr3:25057083-25056891 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 101, 181

Conread position: 56-292
Cow position: chr3:59332984-59332741 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 17

Conread position: 56-293
Cow position: chr3:8391758-8391523 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 163

Conread position: 58-307
Cow position: chr3:15663048-15663300 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 175

Conread position: 65-304
Cow position: chr3:48240645-48240399 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 54

Conread position: 66-241
Cow position: chr3:13291497-13291316 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 67-247
Cow position: chr3:33269615-33269430 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 62

Conread position: 75-247
Cow position: chr3:64135513-64135352 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 84

Conread position: 83-293
Cow position: chr3:38863095-38862882 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 107

Conread position: 85-309
Cow position: chr3:74847807-74848029 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 150

Conread position: 103-309
Cow position: chr3:10412603-10412388 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 129-291
Cow position: chr3:63238707-63238870 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 103

Conread position: 143-293
Cow position: chr3:5972233-5972383 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 11

Conread position: 156-293
Cow position: chr3:82891322-82891189 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 158-293
Cow position: chr3:22339200-22339066 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 29

Conread position: 188-318
Cow position: chr3:64683751-64683880 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 37

Show alignments to all cow chromosomes.