Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 4-284
Cow position: chr4:2140322-2140032 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 5-145
Cow position: chr4:5284578-5284723 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 35

Conread position: 5-145
Cow position: chr4:16859460-16859601 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 23

Conread position: 5-159
Cow position: chr4:23647519-23647671 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 24

Conread position: 5-163
Cow position: chr4:9445546-9445707 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 24

Conread position: 5-163
Cow position: chr4:50978013-50977855 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 24

Conread position: 5-166
Cow position: chr4:10208-10372 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 24

Conread position: 5-169
Cow position: chr4:37703575-37703410 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 25

Conread position: 5-169
Cow position: chr4:45235536-45235702 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 24

Conread position: 5-184
Cow position: chr4:18973753-18973567 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 48

Conread position: 5-190
Cow position: chr4:67652171-67652365 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 50

Conread position: 5-192
Cow position: chr4:18099686-18099873 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 24

Conread position: 5-202
Cow position: chr4:1462147-1462349 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 5-202
Cow position: chr4:19744240-19744028 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 5-202
Cow position: chr4:43476530-43476735 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 24

Conread position: 5-205
Cow position: chr4:8760542-8760332 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 24

Conread position: 5-214
Cow position: chr4:11872590-11872806 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 50

Conread position: 5-217
Cow position: chr4:23508457-23508239 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 24

Conread position: 5-218
Cow position: chr4:61065926-61065715 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 5-221
Cow position: chr4:16967048-16967259 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 118, 24

Conread position: 5-223
Cow position: chr4:22237164-22237384 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 118, 24

Conread position: 5-226
Cow position: chr4:22014163-22014389 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 5-234
Cow position: chr4:47269428-47269190 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 24

Conread position: 5-234
Cow position: chr4:65415922-65416157 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 5

Conread position: 5-237
Cow position: chr4:31348906-31349142 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 24

Conread position: 5-238
Cow position: chr4:42480494-42480256 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 23

Conread position: 5-241
Cow position: chr4:42330470-42330706 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 149

Conread position: 5-241
Cow position: chr4:59452257-59452501 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 50

Conread position: 5-242
Cow position: chr4:24020863-24021110 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 52

Conread position: 5-246
Cow position: chr4:7806432-7806178 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 5-247
Cow position: chr4:3354685-3354933 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 118, 39

Conread position: 5-248
Cow position: chr4:31635249-31635498 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 118, 27

Conread position: 5-251
Cow position: chr4:43898628-43898876 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 118, 24

Conread position: 5-274
Cow position: chr4:10093259-10092991 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 27

Conread position: 5-280
Cow position: chr4:23150398-23150681 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 50

Conread position: 5-280
Cow position: chr4:43316388-43316673 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-281
Cow position: chr4:6487107-6487393 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 5-282
Cow position: chr4:18812949-18813236 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr4:36026010-36026297 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 39

Conread position: 5-282
Cow position: chr4:43896236-43896532 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr4:49744932-49744645 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 5-282
Cow position: chr4:54757998-54758281 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-282
Cow position: chr4:64874768-64875053 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 5-283
Cow position: chr4:17067852-17068139 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 50

Conread position: 5-284
Cow position: chr4:67600418-67600698 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 31

Conread position: 5-285
Cow position: chr4:1368810-1369094 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-285
Cow position: chr4:3170541-3170253 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 5-285
Cow position: chr4:6446021-6445732 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 22

Conread position: 5-286
Cow position: chr4:20243417-20243126 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 5-288
Cow position: chr4:15814049-15814326 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 24

Conread position: 5-291
Cow position: chr4:3450059-3449767 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 23

Conread position: 5-291
Cow position: chr4:19957288-19956990 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 39

Conread position: 5-291
Cow position: chr4:26745767-26745483 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 24

Conread position: 5-291
Cow position: chr4:32249755-32249457 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 24

Conread position: 5-291
Cow position: chr4:34713077-34712782 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 50

Conread position: 5-291
Cow position: chr4:48030119-48029823 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 50

Conread position: 5-291
Cow position: chr4:58688638-58688931 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 46, 23

Conread position: 5-292
Cow position: chr4:17775502-17775805 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 24

Conread position: 5-293
Cow position: chr4:162341-162045 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 180

Conread position: 5-293
Cow position: chr4:1027965-1028268 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-293
Cow position: chr4:3252291-3252581 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 238

Conread position: 5-293
Cow position: chr4:3849865-3849562 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 5-293
Cow position: chr4:11193216-11192918 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 5-293
Cow position: chr4:17821791-17821493 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position: chr4:20616457-20616755 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr4:30171098-30171403 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 10

Conread position: 5-293
Cow position: chr4:43840720-43841016 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 5-293
Cow position: chr4:44901524-44901218 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 27

Conread position: 5-293
Cow position: chr4:47116097-47115799 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr4:54190025-54189733 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 5-293
Cow position: chr4:66174064-66174358 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 5-296
Cow position: chr4:23494221-23493937 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 25

Conread position: 5-300
Cow position: chr4:23451765-23452060 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 5-302
Cow position: chr4:1499835-1500137 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-302
Cow position: chr4:6265955-6266262 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-302
Cow position: chr4:12605620-12605918 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 54, 29

Conread position: 5-302
Cow position: chr4:18845054-18844758 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 16

Conread position: 5-302
Cow position: chr4:27178088-27177780 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 39

Conread position: 5-303
Cow position: chr4:33496820-33496514 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:359143-358832 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:1927374-1927683 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position: chr4:2226503-2226811 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 33

Conread position: 5-304
Cow position: chr4:2601463-2601163 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 5-304
Cow position: chr4:3961635-3961942 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 27

Conread position: 5-304
Cow position: chr4:7048810-7049111 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 5-304
Cow position: chr4:10044508-10044815 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:10822621-10822916 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 24

Conread position: 5-304
Cow position: chr4:10884899-10884592 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:11025958-11026263 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 24

Conread position: 5-304
Cow position: chr4:16363461-16363152 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:16642079-16641770 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:17235280-17234973 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 5-304
Cow position: chr4:17877219-17876909 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:18335690-18335998 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 188

Conread position: 5-304
Cow position: chr4:20656803-20657109 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position: chr4:26874646-26874956 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 40

Conread position: 5-304
Cow position: chr4:33020371-33020680 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 5-304
Cow position: chr4:34223194-34222902 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 27

Conread position: 5-304
Cow position: chr4:37786560-37786254 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 5-304
Cow position: chr4:38584138-38583833 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 5-304
Cow position: chr4:39457930-39457612 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-304
Cow position: chr4:41097228-41096931 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 33

Conread position: 5-304
Cow position: chr4:43884354-43884045 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:44733877-44733574 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 23

Conread position: 5-304
Cow position: chr4:44777931-44778240 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 5-304
Cow position: chr4:45764726-45765028 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 88

Conread position: 5-304
Cow position: chr4:54161802-54162111 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position: chr4:54973306-54973002 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 34

Conread position: 5-304
Cow position: chr4:57988004-57987697 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr4:61242539-61242233 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 5-304
Cow position: chr4:61449777-61449465 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 24

Conread position: 5-305
Cow position: chr4:22316993-22316676 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 5-305
Cow position: chr4:27997028-27996727 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 24

Conread position: 5-307
Cow position: chr4:4185428-4185127 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 5-307
Cow position: chr4:11100342-11100646 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 5-307
Cow position: chr4:27287846-27288155 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 5-307
Cow position: chr4:27539926-27539612 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 51

Conread position: 5-307
Cow position: chr4:30508464-30508148 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 273

Conread position: 5-307
Cow position: chr4:65918933-65918638 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-308
Cow position: chr4:27292647-27292940 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-309
Cow position: chr4:8769296-8768990 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 24

Conread position: 5-309
Cow position: chr4:26468488-26468178 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-309
Cow position: chr4:26548724-26548419 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-309
Cow position: chr4:46529992-46530298 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 24

Conread position: 5-309
Cow position: chr4:65581778-65581462 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 5-310
Cow position: chr4:3284097-3284412 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 5-315
Cow position: chr4:1007153-1006834 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-322
Cow position: chr4:4379634-4379307 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 5-323
Cow position: chr4:3129116-3128790 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-331
Cow position: chr4:61625324-61625640 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 27

Conread position: 5-334
Cow position: chr4:33069579-33069918 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 6-233
Cow position: chr4:16832291-16832526 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 19

Conread position: 6-242
Cow position: chr4:10872081-10872328 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 26

Conread position: 6-255
Cow position: chr4:12033597-12033347 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 23

Conread position: 6-287
Cow position: chr4:65816404-65816690 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 23

Conread position: 6-307
Cow position: chr4:4086108-4086415 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 6-307
Cow position: chr4:19237329-19237016 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 7-304
Cow position: chr4:67767678-67767371 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 7-309
Cow position: chr4:31561974-31562284 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 48

Conread position: 8-309
Cow position: chr4:42639045-42639343 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 114, 24

Conread position: 9-298
Cow position: chr4:5610754-5611048 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 29, 20

Conread position: 11-293
Cow position: chr4:5914578-5914291 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 21

Conread position: 11-304
Cow position: chr4:48496933-48496629 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 11-305
Cow position: chr4:6167716-6168022 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 18

Conread position: 16-304
Cow position: chr4:23525833-23525533 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 13

Conread position: 16-304
Cow position: chr4:67383527-67383233 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 28, 39

Conread position: 20-307
Cow position: chr4:62569928-62569646 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 43

Conread position: 25-286
Cow position: chr4:27462629-27462369 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 25

Conread position: 29-293
Cow position: chr4:1239196-1239459 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 77

Conread position: 30-248
Cow position: chr4:3070145-3069917 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 35-282
Cow position: chr4:55520582-55520327 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 88, 197

Conread position: 35-290
Cow position: chr4:20091329-20091070 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 161

Conread position: 36-170
Cow position: chr4:66548823-66548956 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 16

Conread position: 36-293
Cow position: chr4:41038055-41037791 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 90

Conread position: 37-291
Cow position: chr4:35868414-35868159 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 76

Conread position: 37-291
Cow position: chr4:65431497-65431246 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 86, 137

Conread position: 38-283
Cow position: chr4:962366-962617 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 76

Conread position: 38-285
Cow position: chr4:21364295-21364046 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 65

Conread position: 38-305
Cow position: chr4:25878646-25878372 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 38-307
Cow position: chr4:22073873-22074144 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 220

Conread position: 38-307
Cow position: chr4:58859377-58859654 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 53

Conread position: 39-145
Cow position: chr4:26008505-26008394 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 39-187
Cow position: chr4:25352358-25352514 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 39-307
Cow position: chr4:16605949-16606226 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 40-240
Cow position: chr4:54502068-54502273 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 48

Conread position: 40-291
Cow position: chr4:38153072-38153339 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 40-304
Cow position: chr4:23304113-23304389 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 40-340
Cow position: chr4:38180977-38180671 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 26

Conread position: 41-293
Cow position: chr4:19141226-19140965 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 42-238
Cow position: chr4:6457830-6458029 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 10

Conread position: 42-292
Cow position: chr4:52086379-52086121 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 50, 159

Conread position: 43-332
Cow position: chr4:5874298-5874020 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 8

Conread position: 45-291
Cow position: chr4:34166824-34167068 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 73

Conread position: 47-204
Cow position: chr4:41602138-41601975 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 144

Conread position: 47-304
Cow position: chr4:8673939-8673690 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 76, 115

Conread position: 47-304
Cow position: chr4:10134989-10135250 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 5

Conread position: 52-239
Cow position: chr4:15119197-15119005 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 180

Conread position: 52-293
Cow position: chr4:17257837-17257593 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 6, 144

Conread position: 52-293
Cow position: chr4:64039419-64039181 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 103

Conread position: 52-295
Cow position: chr4:11217968-11217715 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 17, 0

Conread position: 52-304
Cow position: chr4:26399998-26399742 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 71, 50

Conread position: 52-317
Cow position: chr4:1061656-1061927 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 54-229
Cow position: chr4:21056447-21056265 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 132

Conread position: 55-242
Cow position: chr4:48153100-48153294 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 178

Conread position: 55-303
Cow position: chr4:7214566-7214824 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 197

Conread position: 56-291
Cow position: chr4:45499379-45499147 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 65, 95

Conread position: 56-307
Cow position: chr4:39645963-39645701 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 215

Conread position: 57-211
Cow position: chr4:67407760-67407607 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 101

Conread position: 57-282
Cow position: chr4:33181079-33181314 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 58-309
Cow position: chr4:9168889-9169146 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 62, 44

Conread position: 66-242
Cow position: chr4:9712920-9712740 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 8

Conread position: 75-300
Cow position: chr4:15463243-15463474 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 89-292
Cow position: chr4:4126909-4126701 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 91-306
Cow position: chr4:6000261-6000484 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 99-302
Cow position: chr4:13328840-13328635 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 16

Conread position: 116-285
Cow position: chr4:51014208-51014035 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 7, 91

Conread position: 118-293
Cow position: chr4:12455108-12454927 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 118

Conread position: 118-293
Cow position: chr4:13254809-13254628 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 175

Conread position: 151-301
Cow position: chr4:50977635-50977482 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 158-307
Cow position: chr4:32215252-32215103 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 52

Conread position: 171-314
Cow position: chr4:20606720-20606576 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 195-327
Cow position: chr4:20027459-20027593 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.