Cow genome map

Conread name: Spl1-SPL010001B10

Conread position: 5-152
Cow position: chr8:12302505-12302351 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 25

Conread position: 5-157
Cow position: chr8:12310934-12311086 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 118

Conread position: 5-158
Cow position: chr8:50817632-50817475 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 28

Conread position: 5-158
Cow position: chr8:51856058-51855906 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 24

Conread position: 5-179
Cow position: chr8:9169482-9169666 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 26

Conread position: 5-183
Cow position: chr8:11136360-11136546 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 23

Conread position: 5-187
Cow position: chr8:1010034-1009843 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 27

Conread position: 5-190
Cow position: chr8:47678767-47678575 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 24

Conread position: 5-198
Cow position: chr8:16302851-16302647 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 58

Conread position: 5-201
Cow position: chr8:54155097-54155293 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 27

Conread position: 5-209
Cow position: chr8:23651167-23651379 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 50

Conread position: 5-213
Cow position: chr8:20569883-20569666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 56, 24

Conread position: 5-214
Cow position: chr8:25627674-25627459 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 24

Conread position: 5-220
Cow position: chr8:36858823-36859051 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 5-222
Cow position: chr8:21989876-21989650 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 50

Conread position: 5-222
Cow position: chr8:48767070-48766844 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 27

Conread position: 5-223
Cow position: chr8:6470774-6470549 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 6

Conread position: 5-224
Cow position: chr8:33993490-33993269 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 180
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 24

Conread position: 5-228
Cow position: chr8:46214723-46214948 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 27

Conread position: 5-232
Cow position: chr8:16962027-16962262 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 40, 18

Conread position: 5-232
Cow position: chr8:54156450-54156222 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 117, 27

Conread position: 5-233
Cow position: chr8:29030921-29031151 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 118, 15

Conread position: 5-233
Cow position: chr8:46951441-46951215 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 5-235
Cow position: chr8:11118182-11118420 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 50

Conread position: 5-235
Cow position: chr8:46057997-46058237 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 24

Conread position: 5-237
Cow position: chr8:53252366-53252605 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 54, 24

Conread position: 5-238
Cow position: chr8:46843540-46843782 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-238
Cow position: chr8:46953453-46953211 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 5-239
Cow position: chr8:51696713-51696951 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 29

Conread position: 5-240
Cow position: chr8:37122275-37122033 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 6

Conread position: 5-241
Cow position: chr8:7682250-7682497 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 5-241
Cow position: chr8:24912271-24912515 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 31, 49

Conread position: 5-241
Cow position: chr8:45246061-45246299 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 46, 24

Conread position: 5-242
Cow position: chr8:19868830-19868591 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 24

Conread position: 5-247
Cow position: chr8:17315366-17315118 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 118, 27

Conread position: 5-247
Cow position: chr8:29011973-29011725 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 118, 41

Conread position: 5-247
Cow position: chr8:38394220-38393969 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 49

Conread position: 5-248
Cow position: chr8:45690836-45691080 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 5-249
Cow position: chr8:22145276-22145028 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 118, 24

Conread position: 5-251
Cow position: chr8:46743943-46744189 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 24

Conread position: 5-267
Cow position: chr8:820856-821122 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 24

Conread position: 5-270
Cow position: chr8:32966896-32966623 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-278
Cow position: chr8:12452854-12452573 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 49

Conread position: 5-282
Cow position: chr8:8469050-8468763 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr8:14588097-14588383 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-282
Cow position: chr8:23774671-23774384 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 177

Conread position: 5-282
Cow position: chr8:38089745-38089457 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 40

Conread position: 5-282
Cow position: chr8:41650508-41650220 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 50

Conread position: 5-284
Cow position: chr8:18080735-18080450 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 5-285
Cow position: chr8:17200242-17200529 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 5-285
Cow position: chr8:25534903-25534621 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 24

Conread position: 5-285
Cow position: chr8:26607254-26606965 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 27

Conread position: 5-285
Cow position: chr8:41263659-41263367 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 24

Conread position: 5-285
Cow position: chr8:42748822-42748533 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 27

Conread position: 5-285
Cow position: chr8:53450821-53450529 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-290
Cow position: chr8:7051073-7051366 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 286

Conread position: 5-290
Cow position: chr8:51446383-51446676 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 23

Conread position: 5-291
Cow position: chr8:1998951-1998662 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 236

Conread position: 5-291
Cow position: chr8:2166749-2167045 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-291
Cow position: chr8:3332886-3333182 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 50

Conread position: 5-291
Cow position: chr8:3788195-3787906 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 49

Conread position: 5-291
Cow position: chr8:8227631-8227921 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 39

Conread position: 5-291
Cow position: chr8:22531450-22531746 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 5-291
Cow position: chr8:26039392-26039095 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 5-291
Cow position: chr8:28880175-28879879 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 5-291
Cow position: chr8:60067653-60067358 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 5-292
Cow position: chr8:31253140-31252833 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 29

Conread position: 5-293
Cow position: chr8:4923674-4923379 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-293
Cow position: chr8:6077204-6077491 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 119

Conread position: 5-293
Cow position: chr8:10752124-10751826 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 5-293
Cow position: chr8:18057054-18056759 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 5-293
Cow position: chr8:24868446-24868733 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 5-293
Cow position: chr8:24904615-24904326 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 79

Conread position: 5-293
Cow position: chr8:27956191-27956484 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 42

Conread position: 5-293
Cow position: chr8:32314855-32315150 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 5-293
Cow position: chr8:35211829-35212123 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-293
Cow position: chr8:42317493-42317791 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position: chr8:43109644-43109936 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 28

Conread position: 5-293
Cow position: chr8:43477312-43477014 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-293
Cow position: chr8:46961795-46961497 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position: chr8:50430368-50430664 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 5-293
Cow position: chr8:51219652-51219351 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 68, 23

Conread position: 5-295
Cow position: chr8:28230147-28230448 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-298
Cow position: chr8:38573898-38574195 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 184

Conread position: 5-300
Cow position: chr8:46645146-46645452 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 39, 50

Conread position: 5-302
Cow position: chr8:41659035-41659343 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 5-302
Cow position: chr8:49416019-49415716 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 5-303
Cow position: chr8:13831161-13831468 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 5-303
Cow position: chr8:33898145-33898452 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 5-304
Cow position: chr8:1111233-1110927 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 24

Conread position: 5-304
Cow position: chr8:1345197-1345504 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 28

Conread position: 5-304
Cow position: chr8:1500176-1500484 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 24

Conread position: 5-304
Cow position: chr8:1583247-1582941 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 118, 28

Conread position: 5-304
Cow position: chr8:1936085-1935781 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 5-304
Cow position: chr8:2823387-2823692 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-304
Cow position: chr8:3853120-3853423 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 61, 27

Conread position: 5-304
Cow position: chr8:4690176-4689867 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:4727852-4728162 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 58

Conread position: 5-304
Cow position: chr8:5020782-5020473 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:6464373-6464682 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 5-304
Cow position: chr8:7167738-7167424 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 5-304
Cow position: chr8:8914498-8914192 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 39

Conread position: 5-304
Cow position: chr8:10739800-10740109 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:12795163-12794855 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 5-304
Cow position: chr8:14258851-14258550 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 28

Conread position: 5-304
Cow position: chr8:14302473-14302163 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-304
Cow position: chr8:14925113-14925419 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 49

Conread position: 5-304
Cow position: chr8:16940199-16940503 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 5-304
Cow position: chr8:17489241-17489530 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 115, 28

Conread position: 5-304
Cow position: chr8:19053059-19052751 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 5-304
Cow position: chr8:21789053-21789362 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 5-304
Cow position: chr8:22030886-22030581 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 5-304
Cow position: chr8:22376413-22376721 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:24193309-24193005 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 24

Conread position: 5-304
Cow position: chr8:25672066-25671759 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 18

Conread position: 5-304
Cow position: chr8:25772868-25773174 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 39

Conread position: 5-304
Cow position: chr8:26014040-26013739 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 5-304
Cow position: chr8:33592138-33591831 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 187

Conread position: 5-304
Cow position: chr8:35473078-35472769 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:35529455-35529146 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:36632673-36632980 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 29

Conread position: 5-304
Cow position: chr8:39192134-39192443 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:45151884-45152189 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 5-304
Cow position: chr8:45791962-45792262 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-304
Cow position: chr8:47466604-47466914 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 48

Conread position: 5-304
Cow position: chr8:49284297-49284606 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 50

Conread position: 5-304
Cow position: chr8:50283442-50283751 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 27

Conread position: 5-304
Cow position: chr8:51674923-51674614 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 27

Conread position: 5-304
Cow position: chr8:51702333-51702030 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 24

Conread position: 5-304
Cow position: chr8:53838707-53838399 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-304
Cow position: chr8:59258216-59258534 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 47

Conread position: 5-304
Cow position: chr8:60769627-60769936 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-304
Cow position: chr8:61197495-61197804 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 5-305
Cow position: chr8:8514302-8514611 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 5-305
Cow position: chr8:8531797-8532095 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 141, 24

Conread position: 5-305
Cow position: chr8:13931166-13931474 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 5-305
Cow position: chr8:45070699-45070396 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 24

Conread position: 5-305
Cow position: chr8:46106175-46105878 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 162

Conread position: 5-306
Cow position: chr8:49620214-49619904 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 50

Conread position: 5-307
Cow position: chr8:4310137-4309828 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 5-307
Cow position: chr8:7105132-7105433 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 39, 6

Conread position: 5-307
Cow position: chr8:24372669-24372979 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 5-307
Cow position: chr8:41950943-41950645 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 27

Conread position: 5-307
Cow position: chr8:47065827-47066139 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 5-307
Cow position: chr8:47751368-47751680 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-308
Cow position: chr8:983042-982725 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 25

Conread position: 5-308
Cow position: chr8:8224597-8224906 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 117, 174

Conread position: 5-310
Cow position: chr8:18402545-18402860 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 5-310
Cow position: chr8:26394398-26394092 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 116, 20

Conread position: 5-322
Cow position: chr8:8902639-8902951 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 6

Conread position: 5-331
Cow position: chr8:50927329-50927666 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 5-351
Cow position: chr8:55714898-55714531 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 33

Conread position: 6-140
Cow position: chr8:20836436-20836302 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 23

Conread position: 6-232
Cow position: chr8:741721-741948 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 26

Conread position: 6-279
Cow position: chr8:60267142-60266859 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 6-292
Cow position: chr8:3956953-3956657 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 27

Conread position: 6-305
Cow position: chr8:18568130-18568435 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 38

Conread position: 6-312
Cow position: chr8:11372892-11373198 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 19

Conread position: 7-198
Cow position: chr8:47752598-47752782 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 22

Conread position: 8-233
Cow position: chr8:42607931-42608162 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 51, 21

Conread position: 8-282
Cow position: chr8:49220953-49220675 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 36

Conread position: 8-293
Cow position: chr8:9739294-9738999 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 8-307
Cow position: chr8:50315783-50316082 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 9-180
Cow position: chr8:10970159-10969984 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 20

Conread position: 10-293
Cow position: chr8:8387306-8387018 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 19

Conread position: 10-309
Cow position: chr8:45925-45616 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 11-279
Cow position: chr8:60744853-60745120 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 138, 14

Conread position: 11-304
Cow position: chr8:24724565-24724262 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 22

Conread position: 12-267
Cow position: chr8:25677765-25678030 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 39

Conread position: 12-323
Cow position: chr8:1107873-1108188 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 6

Conread position: 13-282
Cow position: chr8:34400299-34400025 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 37

Conread position: 14-247
Cow position: chr8:46480564-46480803 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 109, 22

Conread position: 29-300
Cow position: chr8:29920201-29920486 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 26

Conread position: 35-304
Cow position: chr8:1115527-1115794 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 86, 198

Conread position: 36-291
Cow position: chr8:5243701-5243962 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 142

Conread position: 36-291
Cow position: chr8:25342929-25342677 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 122, 83

Conread position: 36-304
Cow position: chr8:20672915-20673188 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 16

Conread position: 37-284
Cow position: chr8:9963317-9963570 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 17

Conread position: 37-286
Cow position: chr8:18683696-18683946 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 75

Conread position: 38-293
Cow position: chr8:17268121-17268376 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 186

Conread position: 38-303
Cow position: chr8:50734638-50734385 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 28

Conread position: 38-304
Cow position: chr8:11805521-11805245 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 187

Conread position: 38-304
Cow position: chr8:53429137-53428857 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 39, 237

Conread position: 39-235
Cow position: chr8:27152684-27152890 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 39-276
Cow position: chr8:11781674-11781425 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 13

Conread position: 39-292
Cow position: chr8:38710570-38710832 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 74

Conread position: 39-302
Cow position: chr8:17912688-17912953 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 27

Conread position: 39-304
Cow position: chr8:42009686-42009409 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 40-233
Cow position: chr8:48514412-48514609 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 10

Conread position: 42-240
Cow position: chr8:15410772-15410570 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 10

Conread position: 42-280
Cow position: chr8:33692700-33692460 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 104, 79

Conread position: 43-293
Cow position: chr8:20674844-20675097 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 80, 9

Conread position: 44-279
Cow position: chr8:55358667-55358429 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 8

Conread position: 52-262
Cow position: chr8:15570158-15570366 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 130

Conread position: 55-275
Cow position: chr8:48955192-48954978 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 68

Conread position: 56-228
Cow position: chr8:12779551-12779725 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 167

Conread position: 56-263
Cow position: chr8:18207931-18208141 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 58-233
Cow position: chr8:38596931-38597106 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 54

Conread position: 60-293
Cow position: chr8:16384261-16384490 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 11

Conread position: 67-310
Cow position: chr8:24231153-24230911 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 56, 126

Conread position: 75-307
Cow position: chr8:39165700-39165939 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 146

Conread position: 86-293
Cow position: chr8:6202595-6202809 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 98-335
Cow position: chr8:6725272-6725513 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 120

Conread position: 122-293
Cow position: chr8:13373775-13373598 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 25, 71

Conread position: 130-293
Cow position: chr8:47889456-47889287 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 136

Conread position: 141-293
Cow position: chr8:7611169-7611311 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 149-318
Cow position: chr8:33407803-33407969 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 105

Conread position: 172-293
Cow position: chr8:3291551-3291674 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 109
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.