Cow genome map

Conread name: Spl1-SPL010023D07

Conread position: 1-312
Cow position: chr10:16477866-16478181 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 36, 51

Conread position: 3-256
Cow position: chr10:58928348-58928600 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 63

Conread position: 10-305
Cow position: chr10:36469330-36469043 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 351-745
Cow position: chr10:37771292-37771709 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 353-787
Cow position: chr10:29845244-29844787 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 354-750
Cow position: chr10:46196472-46196878 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 228

Conread position: 355-781
Cow position: chr10:41634822-41635248 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 356-787
Cow position: chr10:19706213-19705756 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 358-498
Cow position: chr10:126705-126843 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 15

Conread position: 358-618
Cow position: chr10:53320978-53320705 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 0

Conread position: 358-712
Cow position: chr10:54930792-54930423 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 99

Conread position: 358-745
Cow position: chr10:28946891-28947283 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 227

Conread position: 358-787
Cow position: chr10:29631384-29630924 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 278

Conread position: 358-787
Cow position: chr10:48397686-48397247 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 281

Conread position: 358-788
Cow position: chr10:39039878-39039444 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 15

Conread position: 358-791
Cow position: chr10:38849695-38850143 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 76

Conread position: 358-792
Cow position: chr10:16478170-16478609 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 18

Conread position: 358-794
Cow position: chr10:58376888-58376422 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 30

Conread position: 362-788
Cow position: chr10:57525874-57525468 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 289
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 179, 19

Conread position: 364-601
Cow position: chr10:57502229-57502480 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 99, 12

Conread position: 366-753
Cow position: chr10:21898680-21898298 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 366-766
Cow position: chr10:64221004-64220603 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 71

Conread position: 372-689
Cow position: chr10:22575717-22575392 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 373-625
Cow position: chr10:20382595-20382330 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 83, 28

Conread position: 373-756
Cow position: chr10:53485797-53485407 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 218

Conread position: 373-787
Cow position: chr10:31525185-31525599 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 283
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 43

Conread position: 375-745
Cow position: chr10:68160204-68159815 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 47, 11

Conread position: 383-788
Cow position: chr10:51781972-51781571 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 85

Conread position: 385-678
Cow position: chr10:47788122-47788432 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 392-788
Cow position: chr10:22909014-22908596 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 166

Conread position: 421-637
Cow position: chr10:24976317-24976091 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 517-787
Cow position: chr10:24124461-24124192 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 110

Show alignments to all cow chromosomes.