Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-288 |
| Cow position: | chr14:48825978-48826267 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 1-316 |
| Cow position: | chr14:46529913-46530224 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 3-288 |
| Cow position: | chr14:33677763-33678050 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 4-212 |
| Cow position: | chr14:30584258-30584049 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 203 |
| Conread position: | 351-787 |
| Cow position: | chr14:2295257-2295721 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 266 |
| Conread position: | 358-613 |
| Cow position: | chr14:44227373-44227652 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 358-745 |
| Cow position: | chr14:45710729-45710331 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 359-787 |
| Cow position: | chr14:16342894-16342448 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 363-791 |
| Cow position: | chr14:17759884-17759444 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 366-791 |
| Cow position: | chr14:24996588-24996161 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 367-792 |
| Cow position: | chr14:46466674-46467113 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 264 |
| Conread position: | 373-490 |
| Cow position: | chr14:48402145-48402024 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 40 |
| Conread position: | 373-728 |
| Cow position: | chr14:37454917-37454552 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 81 |
| Conread position: | 373-745 |
| Cow position: | chr14:11654842-11654471 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 373-782 |
| Cow position: | chr14:38148011-38148436 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 250 |
| Conread position: | 374-543 |
| Cow position: | chr14:40342074-40342262 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 374-689 |
| Cow position: | chr14:45207298-45207631 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 48, 272 |
| Conread position: | 374-752 |
| Cow position: | chr14:20564601-20564234 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 376-653 |
| Cow position: | chr14:9521700-9521405 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 242 |
| Conread position: | 376-778 |
| Cow position: | chr14:44775025-44774631 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 376-791 |
| Cow position: | chr14:48826297-48826731 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 377-784 |
| Cow position: | chr14:47939956-47939516 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 235 |
| Conread position: | 377-785 |
| Cow position: | chr14:18417524-18417954 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 404 |
| Conread position: | 379-766 |
| Cow position: | chr14:47643311-47643716 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 313 |
| Conread position: | 380-766 |
| Cow position: | chr14:25365467-25365091 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 381-532 |
| Cow position: | chr14:13322637-13322476 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 381-788 |
| Cow position: | chr14:39298351-39298744 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 469-778 |
| Cow position: | chr14:41410882-41411184 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 54 |
Show alignments to all cow chromosomes.