Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-275 |
| Cow position: | chr16:337516-337797 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 1-318 |
| Cow position: | chr16:10438602-10438930 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 1-318 |
| Cow position: | chr16:26105713-26105377 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 8-162 |
| Cow position: | chr16:55160823-55160669 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 29-214 |
| Cow position: | chr16:10581811-10581992 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 288-745 |
| Cow position: | chr16:49221314-49220855 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 288-791 |
| Cow position: | chr16:10967504-10966991 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 298-745 |
| Cow position: | chr16:34530890-34531350 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 336-787 |
| Cow position: | chr16:18618484-18618018 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 345-744 |
| Cow position: | chr16:23671345-23671770 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 350-680 |
| Cow position: | chr16:44669746-44669400 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 351-778 |
| Cow position: | chr16:23535246-23534801 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 354-741 |
| Cow position: | chr16:51403227-51402817 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 358-628 |
| Cow position: | chr16:49255575-49255287 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 358-660 |
| Cow position: | chr16:16520112-16519793 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 203 |
| Conread position: | 358-787 |
| Cow position: | chr16:25442285-25442738 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 359-730 |
| Cow position: | chr16:1860887-1861283 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 342 |
| Conread position: | 362-771 |
| Cow position: | chr16:32937180-32937602 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 362-787 |
| Cow position: | chr16:3330597-3331038 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 373-679 |
| Cow position: | chr16:9931404-9931729 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 282 |
| Conread position: | 373-747 |
| Cow position: | chr16:16270462-16270072 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 373-753 |
| Cow position: | chr16:5485397-5485795 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 186 |
| Conread position: | 373-777 |
| Cow position: | chr16:1959947-1959528 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 328 |
| Conread position: | 373-787 |
| Cow position: | chr16:8815433-8814999 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 226 |
| Conread position: | 373-790 |
| Cow position: | chr16:47474924-47475350 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 374-793 |
| Cow position: | chr16:52591006-52590572 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 181 |
| Conread position: | 375-486 |
| Cow position: | chr16:27714149-27714034 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 375-720 |
| Cow position: | chr16:41685576-41685220 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 376-745 |
| Cow position: | chr16:41762504-41762879 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 376-791 |
| Cow position: | chr16:41572068-41572512 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 191 |
| Conread position: | 382-757 |
| Cow position: | chr16:55049215-55048835 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 179 |
Show alignments to all cow chromosomes.