Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-212 |
| Cow position: | chr21:26836106-26836315 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 114 |
| Conread position: | 3-313 |
| Cow position: | chr21:37149249-37149545 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 90, 105 |
| Conread position: | 351-778 |
| Cow position: | chr21:6626038-6626487 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 251 |
| Conread position: | 353-751 |
| Cow position: | chr21:43805028-43804599 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 23, 318 |
| Conread position: | 355-787 |
| Cow position: | chr21:22751914-22751477 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 358-759 |
| Cow position: | chr21:21916762-21917167 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 195 |
| Conread position: | 358-778 |
| Cow position: | chr21:13298111-13298546 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 288 |
| Conread position: | 358-781 |
| Cow position: | chr21:997324-996875 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 358-787 |
| Cow position: | chr21:4564979-4565429 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 236 |
| Conread position: | 358-791 |
| Cow position: | chr21:31250525-31250967 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 359-792 |
| Cow position: | chr21:42013748-42014178 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 366-787 |
| Cow position: | chr21:28613849-28614282 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 274 |
| Conread position: | 369-785 |
| Cow position: | chr21:34035455-34035033 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 373-577 |
| Cow position: | chr21:45783005-45783225 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 373-673 |
| Cow position: | chr21:28985628-28985944 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 307 |
| Conread position: | 373-745 |
| Cow position: | chr21:34655364-34655753 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 373-768 |
| Cow position: | chr21:27284997-27285400 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 222 |
| Conread position: | 375-745 |
| Cow position: | chr21:26849488-26849108 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 254 |
| Conread position: | 376-778 |
| Cow position: | chr21:4588468-4588059 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 377-787 |
| Cow position: | chr21:21024999-21025432 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 227 |
| Conread position: | 379-788 |
| Cow position: | chr21:30577-30998 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 288 |
| Conread position: | 393-768 |
| Cow position: | chr21:38023671-38024075 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 32, 194 |
| Conread position: | 416-625 |
| Cow position: | chr21:28736779-28736991 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 498-768 |
| Cow position: | chr21:3170082-3170345 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 535-791 |
| Cow position: | chr21:23804137-23803882 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 237 |
Show alignments to all cow chromosomes.