Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-266 |
| Cow position: | chr4:27300714-27300448 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 1-318 |
| Cow position: | chr4:9847444-9847120 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 10-318 |
| Cow position: | chr4:967301-966983 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 335-787 |
| Cow position: | chr4:19094034-19094499 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 349-787 |
| Cow position: | chr4:14819835-14819378 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 211 |
| Conread position: | 358-778 |
| Cow position: | chr4:36897451-36897889 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 358-787 |
| Cow position: | chr4:5881235-5881681 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 358-791 |
| Cow position: | chr4:52963062-52962608 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 358-797 |
| Cow position: | chr4:34178167-34177720 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 261 |
| Conread position: | 362-597 |
| Cow position: | chr4:69521596-69521851 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 6, 199 |
| Conread position: | 362-778 |
| Cow position: | chr4:26876703-26876273 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 215 |
| Conread position: | 364-769 |
| Cow position: | chr4:22474427-22474827 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 42, 150 |
| Conread position: | 366-569 |
| Cow position: | chr4:493540-493331 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 369-544 |
| Cow position: | chr4:25735549-25735737 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 372-787 |
| Cow position: | chr4:50975713-50976141 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 180 |
| Conread position: | 373-645 |
| Cow position: | chr4:51042200-51041913 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 185 |
| Conread position: | 373-689 |
| Cow position: | chr4:20067634-20067303 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 373-778 |
| Cow position: | chr4:33071736-33071323 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 373-791 |
| Cow position: | chr4:19005228-19004799 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 374-587 |
| Cow position: | chr4:39268068-39267844 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 374-716 |
| Cow position: | chr4:63427936-63427585 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 272 |
| Conread position: | 374-787 |
| Cow position: | chr4:13958263-13958693 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 289 |
| Conread position: | 374-787 |
| Cow position: | chr4:21359318-21359758 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 374-792 |
| Cow position: | chr4:31638838-31638399 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 199 |
| Conread position: | 375-787 |
| Cow position: | chr4:49716871-49717303 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 376-778 |
| Cow position: | chr4:60263069-60262654 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 392-638 |
| Cow position: | chr4:54969820-54970079 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 142 |
| Conread position: | 419-691 |
| Cow position: | chr4:64216536-64216262 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 421-769 |
| Cow position: | chr4:28832857-28833222 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 261 |
| Conread position: | 424-615 |
| Cow position: | chr4:10855641-10855441 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 451-778 |
| Cow position: | chr4:12459382-12459061 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 116, 56 |
Show alignments to all cow chromosomes.