Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-296 |
| Cow position: | chr6:13316453-13316161 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 1-312 |
| Cow position: | chr6:58065744-58066056 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 92, 205 |
| Conread position: | 11-307 |
| Cow position: | chr6:10632571-10632864 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 163 |
| Conread position: | 288-787 |
| Cow position: | chr6:58065967-58066482 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 355-792 |
| Cow position: | chr6:10610170-10610616 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 358-637 |
| Cow position: | chr6:33898945-33898665 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 358-741 |
| Cow position: | chr6:20559788-20559405 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 358-745 |
| Cow position: | chr6:10679741-10680132 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 358-778 |
| Cow position: | chr6:35875393-35874957 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 358-786 |
| Cow position: | chr6:15478493-15478936 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 358-787 |
| Cow position: | chr6:59617425-59617847 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 358-788 |
| Cow position: | chr6:39955163-39955611 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 219 |
| Conread position: | 358-792 |
| Cow position: | chr6:15966498-15966042 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 359-601 |
| Cow position: | chr6:40992-40723 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 362-628 |
| Cow position: | chr6:28134223-28134512 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 362-787 |
| Cow position: | chr6:42441697-42442138 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 364-787 |
| Cow position: | chr6:66546805-66547239 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 373-697 |
| Cow position: | chr6:58460993-58460649 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 373-745 |
| Cow position: | chr6:58601807-58602200 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 323 |
| Conread position: | 373-750 |
| Cow position: | chr6:10645051-10645445 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 373-787 |
| Cow position: | chr6:3487099-3486658 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 237 |
| Conread position: | 373-787 |
| Cow position: | chr6:3571920-3572361 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 373-787 |
| Cow position: | chr6:7177962-7177527 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 319 |
| Conread position: | 374-587 |
| Cow position: | chr6:24534013-24534248 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 374-681 |
| Cow position: | chr6:32072415-32072105 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 374-787 |
| Cow position: | chr6:1382001-1381578 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 17 |
| Conread position: | 378-787 |
| Cow position: | chr6:9843251-9843670 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 45, 242 |
| Conread position: | 403-791 |
| Cow position: | chr6:10339277-10338875 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 223 |
| Conread position: | 425-794 |
| Cow position: | chr6:6158100-6158465 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 212 |
Show alignments to all cow chromosomes.