Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-312 |
| Cow position: | chr7:1403362-1403069 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 290, 97 |
| Conread position: | 1-316 |
| Cow position: | chr7:59138742-59139055 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 2-255 |
| Cow position: | chr7:49723223-49722969 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 3-294 |
| Cow position: | chr7:27583625-27583335 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 235 |
| Conread position: | 3-307 |
| Cow position: | chr7:20533049-20533356 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 10-788 |
| Cow position: | chr7:30118432-30117633 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 285-654 |
| Cow position: | chr7:57563783-57563385 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 286-768 |
| Cow position: | chr7:64350817-64351325 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 268 |
| Conread position: | 332-787 |
| Cow position: | chr7:67490064-67490537 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 239 |
| Conread position: | 349-787 |
| Cow position: | chr7:67429961-67430413 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 338 |
| Conread position: | 350-652 |
| Cow position: | chr7:5249078-5248762 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 205 |
| Conread position: | 352-788 |
| Cow position: | chr7:29471872-29472316 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 355-716 |
| Cow position: | chr7:59139023-59139393 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 358-738 |
| Cow position: | chr7:33332962-33333367 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 358-742 |
| Cow position: | chr7:13575696-13576093 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 358-750 |
| Cow position: | chr7:59680249-59680663 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 358-755 |
| Cow position: | chr7:25094002-25093596 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 358-779 |
| Cow position: | chr7:14213965-14213539 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 358-787 |
| Cow position: | chr7:33311544-33311091 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 358-787 |
| Cow position: | chr7:42871546-42872000 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 358-787 |
| Cow position: | chr7:65872205-65871760 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 305 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 358-791 |
| Cow position: | chr7:39097145-39096682 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 359-666 |
| Cow position: | chr7:1403086-1402760 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 197 |
| Conread position: | 363-787 |
| Cow position: | chr7:59685217-59685667 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 434 |
| Conread position: | 368-787 |
| Cow position: | chr7:3156883-3157329 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 332 |
| Conread position: | 369-787 |
| Cow position: | chr7:66070713-66070273 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 373-572 |
| Cow position: | chr7:58350575-58350360 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 373-631 |
| Cow position: | chr7:60856639-60856375 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 100, 214 |
| Conread position: | 373-721 |
| Cow position: | chr7:18445337-18444970 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 282 |
| Conread position: | 373-738 |
| Cow position: | chr7:58994990-58995365 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 373-745 |
| Cow position: | chr7:49828917-49828525 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 290 |
| Conread position: | 373-745 |
| Cow position: | chr7:67813913-67814285 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 133 |
| Conread position: | 373-751 |
| Cow position: | chr7:53408003-53408386 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 198 |
| Conread position: | 373-769 |
| Cow position: | chr7:24934137-24933719 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 283 |
| Conread position: | 373-781 |
| Cow position: | chr7:21311867-21312291 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 50, 209 |
| Conread position: | 373-786 |
| Cow position: | chr7:25433797-25434237 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 49, 239 |
| Conread position: | 373-788 |
| Cow position: | chr7:51015675-51016099 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 374-787 |
| Cow position: | chr7:20824743-20825159 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 382-679 |
| Cow position: | chr7:996171-996483 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 40, 246 |
| Conread position: | 382-750 |
| Cow position: | chr7:33760447-33760818 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 384-787 |
| Cow position: | chr7:21852420-21852000 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 183 |
| Conread position: | 419-716 |
| Cow position: | chr7:24867780-24867470 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 490-788 |
| Cow position: | chr7:20533518-20533813 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 124, 132 |
Show alignments to all cow chromosomes.