Cow genome map
| Conread name: | Spl1-SPL010023D07 |
| Conread position: | 1-303 |
| Cow position: | chr8:46948998-46949313 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 2-312 |
| Cow position: | chr8:15409071-15409394 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 347-792 |
| Cow position: | chr8:9539127-9538670 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 323 |
| Conread position: | 349-768 |
| Cow position: | chr8:29008210-29008639 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 355-665 |
| Cow position: | chr8:21205156-21205478 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 358-628 |
| Cow position: | chr8:28878601-28878890 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 358-738 |
| Cow position: | chr8:5017775-5018168 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 358-745 |
| Cow position: | chr8:14927290-14926886 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 358-787 |
| Cow position: | chr8:23772234-23772676 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 359-788 |
| Cow position: | chr8:48787953-48788394 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 289 |
| Conread position: | 373-574 |
| Cow position: | chr8:39591650-39591429 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 373-577 |
| Cow position: | chr8:32648111-32648323 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 373-599 |
| Cow position: | chr8:42578981-42578738 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 373-623 |
| Cow position: | chr8:9963905-9963644 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 157 |
| Conread position: | 373-631 |
| Cow position: | chr8:4305654-4305926 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 90, 199 |
| Conread position: | 373-745 |
| Cow position: | chr8:58184991-58184619 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 373-749 |
| Cow position: | chr8:7399493-7399116 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 373-750 |
| Cow position: | chr8:11565358-11565750 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 373-787 |
| Cow position: | chr8:44700595-44701025 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 373-791 |
| Cow position: | chr8:47674448-47674881 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 374-638 |
| Cow position: | chr8:20278495-20278756 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 374-687 |
| Cow position: | chr8:45691406-45691083 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 374-744 |
| Cow position: | chr8:50960006-50959617 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 374-775 |
| Cow position: | chr8:47075765-47076194 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 296 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 86, 204 |
| Conread position: | 374-787 |
| Cow position: | chr8:8516993-8516555 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 421 |
| Conread position: | 376-687 |
| Cow position: | chr8:46454196-46453892 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 376-694 |
| Cow position: | chr8:8309843-8310157 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 377-781 |
| Cow position: | chr8:42469274-42469707 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 153 |
| Conread position: | 378-788 |
| Cow position: | chr8:34660268-34660696 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 381-733 |
| Cow position: | chr8:75974-75618 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 49 |
| Conread position: | 381-786 |
| Cow position: | chr8:51857581-51858018 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 344 |
| Conread position: | 469-740 |
| Cow position: | chr8:30413287-30413558 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 9 |
Show alignments to all cow chromosomes.