Cow genome map


           Conread name:
           Spl1-SPL010024G06
        

               Conread position:
               160-565
               

               Cow position:
               chr9:48110152-48109716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               182-546
               

               Cow position:
               chr9:35207873-35207501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               147, 37
               

               Conread position:
               190-550
               

               Cow position:
               chr9:38031045-38030670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               195-546
               

               Cow position:
               chr9:60074812-60075164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               196-537
               

               Cow position:
               chr9:11450917-11450564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               196-544
               

               Cow position:
               chr9:59356751-59356394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               395-540
               

               Cow position:
               chr9:28820533-28820387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 0
               
Show alignments to all cow chromosomes.