Cow genome map

Conread name: Spl1-SPL010026C06

Conread position: 1-277
Cow position: chr1:57390745-57390471 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 130

Conread position: 1-435
Cow position: chr1:55135447-55135864 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 136

Conread position: 2-280
Cow position: chr1:61534760-61534480 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 170

Conread position: 3-518
Cow position: chr1:53495072-53495577 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 86

Conread position: 6-601
Cow position: chr1:92370744-92370166 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 67

Conread position: 6-614
Cow position: chr1:21577432-21578025 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 64

Conread position: 8-606
Cow position: chr1:12222990-12222397 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 272

Conread position: 13-352
Cow position: chr1:67290488-67290822 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 14-378
Cow position: chr1:61661691-61661314 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 115, 78

Conread position: 14-506
Cow position: chr1:52753545-52753056 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 14-596
Cow position: chr1:68619300-68618743 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 99

Conread position: 14-601
Cow position: chr1:82861391-82862010 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 285

Conread position: 16-614
Cow position: chr1:69539322-69539900 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 17-319
Cow position: chr1:58196458-58196177 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 168, 75

Conread position: 18-176
Cow position: chr1:40531690-40531531 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 19-524
Cow position: chr1:83583328-83582811 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 47

Conread position: 19-544
Cow position: chr1:89834861-89835391 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 150

Conread position: 22-352
Cow position: chr1:36613646-36613319 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 261

Conread position: 22-539
Cow position: chr1:90868809-90868310 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 199

Conread position: 23-280
Cow position: chr1:75443792-75443530 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 9

Conread position: 23-288
Cow position: chr1:60259072-60259335 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 72

Conread position: 23-603
Cow position: chr1:81290153-81290708 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 528, 21

Conread position: 23-613
Cow position: chr1:102266641-102266056 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 218

Conread position: 24-200
Cow position: chr1:4416947-4416760 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 24-305
Cow position: chr1:25119390-25119110 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 137

Conread position: 24-308
Cow position: chr1:51983226-51983496 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 40, 102

Conread position: 24-370
Cow position: chr1:101547403-101547060 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 24-374
Cow position: chr1:15311498-15311846 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 236

Conread position: 24-492
Cow position: chr1:4374707-4374247 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 141

Conread position: 24-524
Cow position: chr1:8349676-8349202 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 83

Conread position: 24-566
Cow position: chr1:69695376-69694831 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 24-568
Cow position: chr1:53458338-53458867 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 8

Conread position: 24-603
Cow position: chr1:79844100-79844683 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 146

Conread position: 24-621
Cow position: chr1:100400566-100399987 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 8

Conread position: 24-628
Cow position: chr1:43353018-43352424 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 137

Conread position: 25-149
Cow position: chr1:25282307-25282182 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 25-150
Cow position: chr1:35785670-35785796 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 25-152
Cow position: chr1:53423083-53423211 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 25-152
Cow position: chr1:62996030-62996155 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 25-176
Cow position: chr1:12143287-12143138 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 25-176
Cow position: chr1:82091784-82091936 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 49

Conread position: 25-178
Cow position: chr1:53539712-53539868 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 25-280
Cow position: chr1:9437914-9437661 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 25-299
Cow position: chr1:65144840-65144553 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 0

Conread position: 25-300
Cow position: chr1:57646312-57646585 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 144

Conread position: 25-318
Cow position: chr1:98577111-98577399 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 101

Conread position: 25-319
Cow position: chr1:24571246-24570964 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 46

Conread position: 25-320
Cow position: chr1:35769078-35769373 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 55

Conread position: 25-320
Cow position: chr1:88911263-88910963 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 64

Conread position: 25-334
Cow position: chr1:97761261-97761558 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 81

Conread position: 25-345
Cow position: chr1:37660810-37660496 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 212, 71

Conread position: 25-347
Cow position: chr1:31414333-31414010 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 152

Conread position: 25-352
Cow position: chr1:81859586-81859272 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 38

Conread position: 25-354
Cow position: chr1:57305463-57305789 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 267

Conread position: 25-359
Cow position: chr1:67821586-67821248 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 250

Conread position: 25-371
Cow position: chr1:81180353-81179997 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 251

Conread position: 25-381
Cow position: chr1:101007974-101007635 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 25-382
Cow position: chr1:99808096-99807735 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 95, 152

Conread position: 25-390
Cow position: chr1:3035357-3034998 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 37

Conread position: 25-400
Cow position: chr1:3456505-3456868 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 20

Conread position: 25-405
Cow position: chr1:12596272-12595898 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 177

Conread position: 25-405
Cow position: chr1:41004735-41004357 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 164

Conread position: 25-413
Cow position: chr1:4026820-4027210 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 101

Conread position: 25-421
Cow position: chr1:31341422-31341034 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 25-421
Cow position: chr1:61725481-61725095 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 25-425
Cow position: chr1:58419556-58419959 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 267

Conread position: 25-429
Cow position: chr1:1403831-1403454 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 25-429
Cow position: chr1:79002324-79001910 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 112

Conread position: 25-434
Cow position: chr1:44154899-44155281 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 65

Conread position: 25-435
Cow position: chr1:30034183-30034566 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 25-437
Cow position: chr1:99136798-99136395 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 150

Conread position: 25-465
Cow position: chr1:57639869-57639452 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 38

Conread position: 25-468
Cow position: chr1:666003-666430 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 55

Conread position: 25-475
Cow position: chr1:99837454-99837012 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 51

Conread position: 25-496
Cow position: chr1:3657734-3657272 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 320
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 215, 181

Conread position: 25-497
Cow position: chr1:53424825-53425272 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 20

Conread position: 25-497
Cow position: chr1:88327354-88326893 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 309
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 56, 220

Conread position: 25-505
Cow position: chr1:47653677-47653209 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 296
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 131

Conread position: 25-512
Cow position: chr1:26702565-26702097 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 25-512
Cow position: chr1:89349614-89350075 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 25-512
Cow position: chr1:91039527-91039064 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 146

Conread position: 25-513
Cow position: chr1:42874315-42873839 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 258

Conread position: 25-518
Cow position: chr1:82884753-82884279 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 146

Conread position: 25-521
Cow position: chr1:71135797-71136271 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 322
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 190, 101

Conread position: 25-533
Cow position: chr1:18780680-18780198 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 331
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 402, 101

Conread position: 25-536
Cow position: chr1:3167434-3166944 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 127

Conread position: 25-537
Cow position: chr1:84255390-84255902 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 25-539
Cow position: chr1:4032282-4032771 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 86

Conread position: 25-539
Cow position: chr1:53308759-53308261 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 7

Conread position: 25-544
Cow position: chr1:28176642-28177147 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 104

Conread position: 25-548
Cow position: chr1:89342356-89341832 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 37

Conread position: 25-556
Cow position: chr1:60032970-60032442 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 160

Conread position: 25-559
Cow position: chr1:45007102-45007624 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 25-566
Cow position: chr1:53520544-53521081 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 108

Conread position: 25-582
Cow position: chr1:53397616-53398156 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 265

Conread position: 25-584
Cow position: chr1:99642727-99642184 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 13

Conread position: 25-587
Cow position: chr1:101551089-101551640 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 270

Conread position: 25-593
Cow position: chr1:19145296-19144741 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 70

Conread position: 25-597
Cow position: chr1:97755151-97755699 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 7

Conread position: 25-599
Cow position: chr1:55357648-55357089 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 83

Conread position: 25-599
Cow position: chr1:68854814-68855366 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 95

Conread position: 25-600
Cow position: chr1:2075695-2075149 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 202

Conread position: 25-600
Cow position: chr1:10778206-10778755 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 25-600
Cow position: chr1:19465698-19466237 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 36

Conread position: 25-600
Cow position: chr1:57576130-57575563 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 129

Conread position: 25-601
Cow position: chr1:21786955-21787526 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 265

Conread position: 25-601
Cow position: chr1:52496410-52496970 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 23

Conread position: 25-601
Cow position: chr1:72035297-72034726 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 172

Conread position: 25-601
Cow position: chr1:81228698-81228134 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 41

Conread position: 25-603
Cow position: chr1:3323487-3324078 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 21

Conread position: 25-603
Cow position: chr1:61392161-61391592 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 147

Conread position: 25-603
Cow position: chr1:85028593-85029140 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 25-603
Cow position: chr1:101822863-101822300 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 10

Conread position: 25-606
Cow position: chr1:51394042-51394625 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 25-606
Cow position: chr1:54207184-54206612 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 25-607
Cow position: chr1:22728681-22729263 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 56

Conread position: 25-607
Cow position: chr1:52434915-52435484 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 505, 74

Conread position: 25-607
Cow position: chr1:63391140-63390555 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 144

Conread position: 25-608
Cow position: chr1:11854058-11853478 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 263

Conread position: 25-609
Cow position: chr1:94211866-94212432 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 25-614
Cow position: chr1:34159467-34160043 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 104

Conread position: 25-614
Cow position: chr1:41181474-41182051 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 67

Conread position: 25-614
Cow position: chr1:54258204-54258785 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 95

Conread position: 25-614
Cow position: chr1:81569404-81568813 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 217

Conread position: 25-614
Cow position: chr1:84812318-84811724 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 275

Conread position: 25-615
Cow position: chr1:74930103-74929491 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 279

Conread position: 25-622
Cow position: chr1:41696693-41697277 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 118

Conread position: 25-624
Cow position: chr1:93499255-93499844 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 47

Conread position: 25-626
Cow position: chr1:101915801-101916397 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 146

Conread position: 25-627
Cow position: chr1:20001115-20000529 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 42

Conread position: 25-627
Cow position: chr1:46694024-46693424 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 168

Conread position: 25-628
Cow position: chr1:63596427-63595825 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 64

Conread position: 25-630
Cow position: chr1:77620178-77620778 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 210

Conread position: 25-631
Cow position: chr1:72012171-72011592 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 42

Conread position: 25-634
Cow position: chr1:1981479-1980873 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 78

Conread position: 25-649
Cow position: chr1:20002620-20001988 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 81

Conread position: 26-151
Cow position: chr1:86578624-86578749 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 97, 79

Conread position: 26-212
Cow position: chr1:75249869-75250057 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 97, 105

Conread position: 26-229
Cow position: chr1:22823573-22823774 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 94, 0

Conread position: 26-276
Cow position: chr1:57541866-57541617 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 97, 109

Conread position: 26-277
Cow position: chr1:72813048-72813296 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 214

Conread position: 26-288
Cow position: chr1:83611-83873 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 100, 149

Conread position: 26-290
Cow position: chr1:97622569-97622304 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 232

Conread position: 26-295
Cow position: chr1:7583363-7583625 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 12

Conread position: 26-299
Cow position: chr1:32360499-32360232 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 74

Conread position: 26-307
Cow position: chr1:54484693-54484980 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 97, 147

Conread position: 26-308
Cow position: chr1:55020121-55020394 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 20

Conread position: 26-320
Cow position: chr1:14561318-14561018 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 264

Conread position: 26-320
Cow position: chr1:53208062-53207762 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 26-322
Cow position: chr1:73756729-73757014 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 26-332
Cow position: chr1:43893561-43893861 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 143

Conread position: 26-334
Cow position: chr1:25183756-25184073 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 293

Conread position: 26-335
Cow position: chr1:38688108-38688415 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 97, 207

Conread position: 26-353
Cow position: chr1:54732810-54732511 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 26-354
Cow position: chr1:44136818-44136508 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 107

Conread position: 26-367
Cow position: chr1:50634778-50634430 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 94, 72

Conread position: 26-368
Cow position: chr1:21092725-21093064 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 257

Conread position: 26-369
Cow position: chr1:42053690-42053360 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 26-370
Cow position: chr1:69941332-69940993 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 99

Conread position: 26-371
Cow position: chr1:27495131-27495460 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 100, 76

Conread position: 26-371
Cow position: chr1:29916051-29916383 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 97, 129

Conread position: 26-372
Cow position: chr1:21131450-21131119 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 103

Conread position: 26-378
Cow position: chr1:23634264-23633929 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 26-385
Cow position: chr1:87216085-87216446 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 200

Conread position: 26-386
Cow position: chr1:96184375-96184030 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 192

Conread position: 26-388
Cow position: chr1:33716854-33717220 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 32

Conread position: 26-396
Cow position: chr1:44836599-44836223 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 147

Conread position: 26-397
Cow position: chr1:4589847-4589474 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 33

Conread position: 26-421
Cow position: chr1:71946731-71946351 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 72

Conread position: 26-422
Cow position: chr1:78783179-78783568 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 298

Conread position: 26-426
Cow position: chr1:68783026-68782612 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 148

Conread position: 26-428
Cow position: chr1:8532582-8532188 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 169

Conread position: 26-428
Cow position: chr1:76223058-76222662 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 244

Conread position: 26-429
Cow position: chr1:55163558-55163946 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 99

Conread position: 26-429
Cow position: chr1:61724387-61723992 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 71

Conread position: 26-429
Cow position: chr1:82504600-82505003 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-433
Cow position: chr1:11873721-11873330 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 26-433
Cow position: chr1:24235885-24235483 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 26-477
Cow position: chr1:102647636-102647198 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 211

Conread position: 26-485
Cow position: chr1:91800965-91800517 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 55

Conread position: 26-490
Cow position: chr1:68951276-68951713 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 26-491
Cow position: chr1:44769476-44769022 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 117

Conread position: 26-495
Cow position: chr1:45289238-45288778 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 117

Conread position: 26-496
Cow position: chr1:41735985-41735526 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 303
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 272, 84

Conread position: 26-497
Cow position: chr1:10071214-10070746 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 26-512
Cow position: chr1:81356070-81355592 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-513
Cow position: chr1:64251431-64250941 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 7

Conread position: 26-517
Cow position: chr1:37309877-37309404 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 141

Conread position: 26-520
Cow position: chr1:21460503-21460988 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 129

Conread position: 26-521
Cow position: chr1:84240543-84240999 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 84

Conread position: 26-523
Cow position: chr1:39069325-39068835 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 221

Conread position: 26-529
Cow position: chr1:95176568-95177064 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 261

Conread position: 26-530
Cow position: chr1:3790421-3789942 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 40

Conread position: 26-530
Cow position: chr1:56228885-56229367 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 26-531
Cow position: chr1:74822083-74822580 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 262

Conread position: 26-539
Cow position: chr1:48731197-48730696 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 112

Conread position: 26-539
Cow position: chr1:85361488-85361988 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 269

Conread position: 26-539
Cow position: chr1:98551354-98551856 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 7

Conread position: 26-542
Cow position: chr1:80336617-80336108 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 305

Conread position: 26-562
Cow position: chr1:52039270-52039796 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-567
Cow position: chr1:36874651-36875188 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 99

Conread position: 26-569
Cow position: chr1:22826800-22827316 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 217

Conread position: 26-573
Cow position: chr1:31348799-31348261 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 108

Conread position: 26-577
Cow position: chr1:13638029-13637487 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 93

Conread position: 26-581
Cow position: chr1:61735809-61735266 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 272

Conread position: 26-591
Cow position: chr1:91817138-91816576 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 103

Conread position: 26-592
Cow position: chr1:11914239-11913688 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 112

Conread position: 26-595
Cow position: chr1:26896190-26895616 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 26-599
Cow position: chr1:8256-8818 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 64

Conread position: 26-599
Cow position: chr1:34685833-34686365 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 35

Conread position: 26-600
Cow position: chr1:48105803-48105224 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 259

Conread position: 26-601
Cow position: chr1:31765761-31765168 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 63

Conread position: 26-601
Cow position: chr1:38278399-38277824 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 81

Conread position: 26-601
Cow position: chr1:54199747-54199195 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 26-601
Cow position: chr1:72069193-72068632 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 26-601
Cow position: chr1:83082637-83083197 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 125

Conread position: 26-601
Cow position: chr1:89742379-89741794 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 272

Conread position: 26-602
Cow position: chr1:100421477-100422023 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 26-603
Cow position: chr1:6760384-6759840 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 26-603
Cow position: chr1:56225111-56225670 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 134

Conread position: 26-603
Cow position: chr1:94226915-94226340 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 229

Conread position: 26-608
Cow position: chr1:36997830-36998391 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 145

Conread position: 26-614
Cow position: chr1:7971083-7971619 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 32

Conread position: 26-614
Cow position: chr1:53374067-53374642 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 216

Conread position: 26-614
Cow position: chr1:64678342-64678894 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 61

Conread position: 26-614
Cow position: chr1:70380522-70379952 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 266

Conread position: 26-614
Cow position: chr1:82936951-82936391 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 217

Conread position: 26-614
Cow position: chr1:86113780-86113187 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 194

Conread position: 26-614
Cow position: chr1:96963952-96964536 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 252

Conread position: 26-614
Cow position: chr1:100450559-100449976 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 264

Conread position: 26-617
Cow position: chr1:68818176-68817583 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 161

Conread position: 26-620
Cow position: chr1:15547104-15547686 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 22

Conread position: 26-625
Cow position: chr1:31934140-31934730 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 236

Conread position: 26-626
Cow position: chr1:79590733-79591337 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 269

Conread position: 26-628
Cow position: chr1:13548360-13547755 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 298

Conread position: 26-628
Cow position: chr1:71045384-71045959 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 148

Conread position: 26-690
Cow position: chr1:102350137-102349465 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 248

Conread position: 27-219
Cow position: chr1:22525242-22525443 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 27-227
Cow position: chr1:98412585-98412777 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 197, 43

Conread position: 27-271
Cow position: chr1:102618202-102618426 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 27-275
Cow position: chr1:101792462-101792215 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 98

Conread position: 27-315
Cow position: chr1:81161652-81161933 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 27-354
Cow position: chr1:40310644-40310966 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 147, 97

Conread position: 27-363
Cow position: chr1:20125246-20125581 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 28

Conread position: 27-370
Cow position: chr1:80973989-80973632 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 27-382
Cow position: chr1:68282428-68282788 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 262

Conread position: 27-420
Cow position: chr1:1801782-1802159 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 27-420
Cow position: chr1:3340564-3340956 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 264

Conread position: 27-435
Cow position: chr1:90640666-90641070 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 69

Conread position: 27-510
Cow position: chr1:92433655-92434108 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 79

Conread position: 27-521
Cow position: chr1:31499261-31499744 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 228

Conread position: 27-554
Cow position: chr1:76020046-76019542 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 149

Conread position: 27-592
Cow position: chr1:11728827-11729365 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 129

Conread position: 27-608
Cow position: chr1:35162043-35162613 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 41

Conread position: 27-610
Cow position: chr1:101634339-101634912 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 89

Conread position: 27-614
Cow position: chr1:61005928-61005341 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 103

Conread position: 27-631
Cow position: chr1:73584788-73584174 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 207

Conread position: 28-303
Cow position: chr1:57957223-57956949 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 28-496
Cow position: chr1:71938863-71938414 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 298
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 95, 28

Conread position: 28-601
Cow position: chr1:78091665-78092242 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 215

Conread position: 28-603
Cow position: chr1:22730397-22730937 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 115

Conread position: 28-603
Cow position: chr1:91066513-91065953 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 146

Conread position: 29-435
Cow position: chr1:43380387-43379991 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 90

Conread position: 29-601
Cow position: chr1:52329891-52329319 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 77

Conread position: 29-607
Cow position: chr1:1877663-1878231 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 60

Conread position: 29-610
Cow position: chr1:62963920-62964479 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 17

Conread position: 30-588
Cow position: chr1:68276045-68276603 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 19

Conread position: 31-593
Cow position: chr1:53622605-53623148 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 95

Conread position: 33-630
Cow position: chr1:97231616-97232200 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 137

Conread position: 40-600
Cow position: chr1:83982728-83982175 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 26

Conread position: 40-601
Cow position: chr1:874290-874865 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 174

Conread position: 40-603
Cow position: chr1:100551609-100552170 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 216

Conread position: 40-605
Cow position: chr1:21508038-21508602 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 114

Conread position: 40-606
Cow position: chr1:66898831-66898287 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 41-497
Cow position: chr1:26942958-26943403 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 90

Conread position: 41-635
Cow position: chr1:42256862-42256271 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 247

Conread position: 42-366
Cow position: chr1:100771085-100770779 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 108

Conread position: 42-492
Cow position: chr1:80764903-80764446 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 309
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 66

Conread position: 42-588
Cow position: chr1:70296917-70297471 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 101

Conread position: 43-504
Cow position: chr1:96478331-96478802 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 212

Conread position: 43-514
Cow position: chr1:66429951-66430403 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 128

Conread position: 43-521
Cow position: chr1:100705786-100706245 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 52

Conread position: 46-498
Cow position: chr1:20204678-20205123 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 46-521
Cow position: chr1:44125996-44125518 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 200

Conread position: 46-602
Cow position: chr1:48444525-48443988 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 79

Conread position: 49-368
Cow position: chr1:17291984-17291672 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 52

Conread position: 49-603
Cow position: chr1:7739629-7740147 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 519, 77

Conread position: 49-606
Cow position: chr1:24133395-24132856 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 49-627
Cow position: chr1:11772425-11771858 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 246

Conread position: 50-614
Cow position: chr1:22628982-22628441 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 171

Conread position: 51-539
Cow position: chr1:34300890-34300414 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 206

Conread position: 52-316
Cow position: chr1:16997742-16997474 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 191, 118

Conread position: 54-517
Cow position: chr1:95215515-95215075 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 41

Conread position: 54-632
Cow position: chr1:36879939-36880518 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 206

Conread position: 55-479
Cow position: chr1:53594987-53595396 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 56-367
Cow position: chr1:732262-731971 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 185

Conread position: 57-566
Cow position: chr1:73960364-73960860 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 231

Conread position: 58-320
Cow position: chr1:24202071-24201823 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 58-439
Cow position: chr1:98562825-98563199 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 112

Conread position: 58-524
Cow position: chr1:81913484-81913033 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 67

Conread position: 58-531
Cow position: chr1:69264487-69264937 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 112

Conread position: 58-614
Cow position: chr1:101713780-101714330 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 49

Conread position: 58-634
Cow position: chr1:23488845-23488265 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 67

Conread position: 59-413
Cow position: chr1:5873307-5872956 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 116

Conread position: 59-523
Cow position: chr1:11226579-11226127 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 111

Conread position: 59-531
Cow position: chr1:3137592-3138042 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 137

Conread position: 59-602
Cow position: chr1:16856008-16855498 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 343
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 470, 52

Conread position: 59-625
Cow position: chr1:77462032-77462565 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 60-408
Cow position: chr1:22467595-22467943 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 212

Conread position: 60-512
Cow position: chr1:7350205-7350658 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 227

Conread position: 60-531
Cow position: chr1:42359924-42360417 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 290

Conread position: 60-610
Cow position: chr1:60986636-60987199 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 183

Conread position: 61-614
Cow position: chr1:42887592-42887065 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 10

Conread position: 63-249
Cow position: chr1:29662629-29662444 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 72

Conread position: 63-295
Cow position: chr1:99105216-99104983 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 112

Conread position: 63-299
Cow position: chr1:31274639-31274399 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 222

Conread position: 63-369
Cow position: chr1:23969365-23969065 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 64

Conread position: 63-494
Cow position: chr1:13895815-13895390 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 288
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 65, 21

Conread position: 64-600
Cow position: chr1:39418447-39417930 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 106

Conread position: 64-601
Cow position: chr1:102756750-102756234 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 65-264
Cow position: chr1:28513454-28513254 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 66-539
Cow position: chr1:57901064-57900587 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 67

Conread position: 71-491
Cow position: chr1:85596624-85597027 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 92

Conread position: 72-537
Cow position: chr1:80988028-80988481 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 53

Conread position: 73-371
Cow position: chr1:44164760-44165057 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 63

Conread position: 75-630
Cow position: chr1:73546234-73545674 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 9

Conread position: 76-342
Cow position: chr1:69445057-69445310 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 76-370
Cow position: chr1:49839205-49839479 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 76-435
Cow position: chr1:4573215-4573553 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 5, 57

Conread position: 76-609
Cow position: chr1:12464970-12464456 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 59

Conread position: 76-611
Cow position: chr1:41056367-41056892 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 125

Conread position: 77-313
Cow position: chr1:30693031-30692792 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 84

Conread position: 77-354
Cow position: chr1:82993243-82993518 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 183

Conread position: 78-521
Cow position: chr1:98360729-98360285 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 285

Conread position: 79-371
Cow position: chr1:79663978-79663694 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 62

Conread position: 80-435
Cow position: chr1:73561962-73561614 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 76

Conread position: 80-512
Cow position: chr1:88652318-88652746 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 80-526
Cow position: chr1:39510368-39509934 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 119

Conread position: 80-534
Cow position: chr1:100800044-100800483 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 80-603
Cow position: chr1:84282748-84283275 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 185

Conread position: 80-609
Cow position: chr1:95100653-95101161 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 49

Conread position: 82-601
Cow position: chr1:18937144-18936635 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 66

Conread position: 83-371
Cow position: chr1:35170026-35170309 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 89

Conread position: 83-602
Cow position: chr1:33331380-33330899 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 42

Conread position: 84-595
Cow position: chr1:68845789-68845310 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 87

Conread position: 84-607
Cow position: chr1:63435112-63434590 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 87

Conread position: 87-539
Cow position: chr1:72141258-72141706 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 88-532
Cow position: chr1:94202069-94202512 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 298
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 65

Conread position: 89-435
Cow position: chr1:22448888-22448548 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 83

Conread position: 89-488
Cow position: chr1:71257787-71257380 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 198

Conread position: 90-497
Cow position: chr1:46354609-46355011 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 196

Conread position: 91-427
Cow position: chr1:47008730-47009058 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 43

Conread position: 92-421
Cow position: chr1:33811633-33811949 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 139

Conread position: 93-592
Cow position: chr1:77720527-77720067 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 61

Conread position: 93-603
Cow position: chr1:1956628-1956134 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 93-617
Cow position: chr1:29627216-29626693 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 169

Conread position: 94-378
Cow position: chr1:24528896-24528625 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 38

Conread position: 95-614
Cow position: chr1:87888108-87888606 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 30

Conread position: 97-360
Cow position: chr1:34000609-34000876 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 198

Conread position: 98-367
Cow position: chr1:98380872-98380601 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 189

Conread position: 98-404
Cow position: chr1:77099835-77099545 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 28, 144

Conread position: 98-601
Cow position: chr1:81613090-81613591 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 189

Conread position: 98-625
Cow position: chr1:68217655-68217141 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 169

Conread position: 99-379
Cow position: chr1:81472585-81472856 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 141

Conread position: 100-429
Cow position: chr1:3752236-3751911 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 225

Conread position: 100-470
Cow position: chr1:1991723-1991350 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 192

Conread position: 103-603
Cow position: chr1:75744572-75745064 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 12

Conread position: 104-613
Cow position: chr1:25383373-25383883 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 105-405
Cow position: chr1:91142443-91142145 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 105-497
Cow position: chr1:57617724-57618104 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 250
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 119, 109

Conread position: 107-413
Cow position: chr1:5409897-5409604 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 18

Conread position: 109-592
Cow position: chr1:100741015-100741475 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 315
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 420, 22

Conread position: 109-601
Cow position: chr1:27358657-27359142 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 188

Conread position: 110-430
Cow position: chr1:5394152-5393845 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 111-385
Cow position: chr1:64099542-64099276 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 210, 23

Conread position: 111-614
Cow position: chr1:33719832-33720320 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 59

Conread position: 112-381
Cow position: chr1:46940140-46939873 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 13

Conread position: 112-464
Cow position: chr1:60907080-60907439 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 188

Conread position: 112-518
Cow position: chr1:72286330-72285952 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 58

Conread position: 112-529
Cow position: chr1:4027580-4027990 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 169

Conread position: 112-539
Cow position: chr1:634910-635331 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 179

Conread position: 113-475
Cow position: chr1:88943044-88943391 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 225
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 113-586
Cow position: chr1:42968594-42968130 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 114-601
Cow position: chr1:40599773-40600227 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 114-608
Cow position: chr1:101834555-101835025 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 337
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 115

Conread position: 116-495
Cow position: chr1:49132394-49132019 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 237
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 168

Conread position: 117-600
Cow position: chr1:99609092-99609568 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 118-615
Cow position: chr1:78810761-78811258 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 52

Conread position: 119-421
Cow position: chr1:99638053-99637761 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 139, 171

Conread position: 119-603
Cow position: chr1:89510205-89509727 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 120-319
Cow position: chr1:24561723-24561526 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 120-490
Cow position: chr1:90864571-90864205 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 120-559
Cow position: chr1:52488230-52487818 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 50

Conread position: 120-634
Cow position: chr1:53369798-53370322 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 35

Conread position: 121-333
Cow position: chr1:32631199-32631404 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 121-614
Cow position: chr1:61742239-61741751 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 108

Conread position: 122-535
Cow position: chr1:92437261-92436856 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 168

Conread position: 122-539
Cow position: chr1:33997182-33996787 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 122-603
Cow position: chr1:97954718-97954279 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 322
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 52

Conread position: 122-630
Cow position: chr1:43839257-43839739 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 156

Conread position: 123-506
Cow position: chr1:60707134-60707507 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 160

Conread position: 124-614
Cow position: chr1:45020071-45019591 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 45

Conread position: 127-320
Cow position: chr1:13614984-13614789 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 79

Conread position: 130-497
Cow position: chr1:40482673-40482318 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 109, 31

Conread position: 131-265
Cow position: chr1:76170022-76170156 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 131-326
Cow position: chr1:13455882-13456079 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 108

Conread position: 131-347
Cow position: chr1:31348169-31347965 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 131-368
Cow position: chr1:97806531-97806761 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 72

Conread position: 131-370
Cow position: chr1:31871159-31871399 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 178

Conread position: 131-370
Cow position: chr1:32244660-32244426 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 61

Conread position: 131-370
Cow position: chr1:71818720-71818484 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 122, 19

Conread position: 131-371
Cow position: chr1:21835687-21835918 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 131-371
Cow position: chr1:63905735-63905498 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 109, 84

Conread position: 131-379
Cow position: chr1:53039960-53039716 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 182, 57

Conread position: 131-382
Cow position: chr1:29975858-29975617 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 131-421
Cow position: chr1:56748329-56748620 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 38

Conread position: 131-438
Cow position: chr1:57264247-57263956 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 131-439
Cow position: chr1:57635206-57635499 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 131-496
Cow position: chr1:74947378-74947024 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 232, 71

Conread position: 131-497
Cow position: chr1:81868988-81868634 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 112

Conread position: 131-514
Cow position: chr1:95765350-95764982 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 252
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 109, 152

Conread position: 131-519
Cow position: chr1:93810182-93810546 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 214, 30

Conread position: 131-539
Cow position: chr1:77880976-77880598 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 38

Conread position: 131-591
Cow position: chr1:4290897-4291347 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 131-592
Cow position: chr1:6941205-6941659 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 38

Conread position: 131-592
Cow position: chr1:6958618-6959072 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 38

Conread position: 131-593
Cow position: chr1:100761830-100762268 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 310
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 326, 73

Conread position: 131-598
Cow position: chr1:34856890-34856425 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 99

Conread position: 131-603
Cow position: chr1:6165990-6166436 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 98

Conread position: 131-603
Cow position: chr1:12871268-12870806 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 317
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 310, 124

Conread position: 131-603
Cow position: chr1:61884654-61885116 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 153

Conread position: 131-614
Cow position: chr1:74084450-74083974 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 39

Conread position: 131-625
Cow position: chr1:65103374-65103852 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 88

Conread position: 132-304
Cow position: chr1:72790925-72791094 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 38

Conread position: 132-370
Cow position: chr1:52506804-52506581 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 132-432
Cow position: chr1:78794995-78794706 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 38

Conread position: 132-435
Cow position: chr1:45535442-45535740 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 45

Conread position: 132-437
Cow position: chr1:73761613-73761320 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 109

Conread position: 132-524
Cow position: chr1:98594308-98594687 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 43

Conread position: 132-542
Cow position: chr1:57297236-57297629 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 23

Conread position: 132-603
Cow position: chr1:64302492-64302046 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 25

Conread position: 132-614
Cow position: chr1:51628762-51628285 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 162

Conread position: 132-615
Cow position: chr1:197262-196790 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 50

Conread position: 132-637
Cow position: chr1:37322266-37321770 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 154

Conread position: 133-304
Cow position: chr1:3872592-3872759 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 146, 0

Conread position: 133-367
Cow position: chr1:85783267-85783495 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 133-603
Cow position: chr1:76470400-76470861 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 98

Conread position: 134-288
Cow position: chr1:39249053-39248899 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 134-318
Cow position: chr1:11020777-11020956 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 145, 0

Conread position: 134-334
Cow position: chr1:98612983-98613180 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 36

Conread position: 134-363
Cow position: chr1:84116144-84116363 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 134-366
Cow position: chr1:95327411-95327181 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 25

Conread position: 134-368
Cow position: chr1:20799610-20799857 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 185

Conread position: 134-370
Cow position: chr1:22777809-22777571 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 134-370
Cow position: chr1:99095105-99095336 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 112, 84

Conread position: 134-378
Cow position: chr1:3061852-3061604 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 128

Conread position: 134-382
Cow position: chr1:56643848-56643604 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 151

Conread position: 134-492
Cow position: chr1:90423344-90422993 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 152

Conread position: 134-513
Cow position: chr1:80899850-80900230 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 35

Conread position: 134-524
Cow position: chr1:41252661-41252288 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 156

Conread position: 134-539
Cow position: chr1:56711877-56711466 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 134-548
Cow position: chr1:42555012-42555415 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 35

Conread position: 134-597
Cow position: chr1:21954476-21954030 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 148

Conread position: 134-600
Cow position: chr1:13413769-13414223 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 35

Conread position: 134-600
Cow position: chr1:82338043-82337579 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 134-601
Cow position: chr1:16767343-16766884 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 153

Conread position: 134-603
Cow position: chr1:3924051-3923600 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 134-603
Cow position: chr1:43505265-43505728 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 94

Conread position: 134-603
Cow position: chr1:79165350-79164878 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 154

Conread position: 134-608
Cow position: chr1:47658097-47658557 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 34

Conread position: 134-614
Cow position: chr1:22836144-22836613 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 36

Conread position: 134-620
Cow position: chr1:71295566-71295079 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 50

Conread position: 134-627
Cow position: chr1:48580872-48581362 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 124

Conread position: 136-332
Cow position: chr1:3757696-3757892 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 116, 156

Conread position: 136-354
Cow position: chr1:19545351-19545141 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 107, 23

Conread position: 136-372
Cow position: chr1:102826069-102825842 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 136-382
Cow position: chr1:46839338-46839587 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 136-396
Cow position: chr1:19998291-19998041 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 33

Conread position: 136-513
Cow position: chr1:38401553-38401910 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 324, 33

Conread position: 136-530
Cow position: chr1:1165344-1165726 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 28, 148

Conread position: 136-586
Cow position: chr1:72103587-72104041 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 26

Conread position: 136-600
Cow position: chr1:45555106-45555566 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 34

Conread position: 136-600
Cow position: chr1:68827161-68826723 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 136-607
Cow position: chr1:29935637-29935182 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 33

Conread position: 136-614
Cow position: chr1:69678578-69678109 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 19

Conread position: 137-366
Cow position: chr1:37646256-37646034 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 94

Conread position: 137-371
Cow position: chr1:24655705-24655935 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 41

Conread position: 137-379
Cow position: chr1:77657811-77658050 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 94, 32

Conread position: 137-582
Cow position: chr1:52994769-52995208 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 32

Conread position: 138-299
Cow position: chr1:94378777-94378935 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 82

Conread position: 138-318
Cow position: chr1:67916782-67916959 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 36

Conread position: 138-345
Cow position: chr1:64160087-64160289 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 138-365
Cow position: chr1:57396183-57395961 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 114

Conread position: 138-380
Cow position: chr1:49131376-49131133 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 101, 145

Conread position: 139-600
Cow position: chr1:14379783-14379349 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 68

Conread position: 139-600
Cow position: chr1:39427234-39426816 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 30

Conread position: 139-626
Cow position: chr1:6103166-6102673 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 54

Conread position: 140-352
Cow position: chr1:61246403-61246203 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 140-365
Cow position: chr1:81363742-81363959 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 197, 30

Conread position: 140-371
Cow position: chr1:3776866-3776643 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 0

Conread position: 140-401
Cow position: chr1:56657789-56658038 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 247, 30

Conread position: 140-422
Cow position: chr1:29901209-29900945 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 238, 75

Conread position: 140-429
Cow position: chr1:11770545-11770265 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 29

Conread position: 140-470
Cow position: chr1:1916488-1916159 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 133

Conread position: 140-524
Cow position: chr1:96713066-96712688 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 150

Conread position: 140-532
Cow position: chr1:5135943-5135579 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 30

Conread position: 140-539
Cow position: chr1:85162799-85162408 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 29

Conread position: 140-603
Cow position: chr1:5597451-5597008 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 72

Conread position: 140-603
Cow position: chr1:54478070-54478520 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 141

Conread position: 141-362
Cow position: chr1:89395340-89395567 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 141-363
Cow position: chr1:75967185-75967398 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 141-413
Cow position: chr1:10116047-10115783 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 186

Conread position: 141-483
Cow position: chr1:53423427-53423766 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 126

Conread position: 141-504
Cow position: chr1:47268879-47269233 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 154

Conread position: 141-513
Cow position: chr1:37707220-37706866 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 146

Conread position: 141-535
Cow position: chr1:71253806-71253423 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 144

Conread position: 141-542
Cow position: chr1:47233726-47233338 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 141-566
Cow position: chr1:24534494-24534094 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 142-316
Cow position: chr1:95071736-95071904 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 142-318
Cow position: chr1:77891563-77891739 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 115

Conread position: 142-366
Cow position: chr1:98708192-98708410 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 142-389
Cow position: chr1:28567688-28567441 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 28

Conread position: 142-449
Cow position: chr1:50679536-50679234 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 148

Conread position: 142-515
Cow position: chr1:81563483-81563859 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 56

Conread position: 142-531
Cow position: chr1:36931909-36932284 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 103

Conread position: 142-601
Cow position: chr1:10632803-10633242 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 142-623
Cow position: chr1:50931219-50930756 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 77

Conread position: 142-629
Cow position: chr1:42138615-42139070 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 136

Conread position: 143-333
Cow position: chr1:74013516-74013322 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 143-497
Cow position: chr1:55146552-55146893 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 144-485
Cow position: chr1:89485343-89485663 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 45, 25

Conread position: 144-598
Cow position: chr1:93528442-93528893 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 144-603
Cow position: chr1:70538355-70538810 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 143

Conread position: 144-603
Cow position: chr1:78857570-78857122 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 25

Conread position: 145-385
Cow position: chr1:3244603-3244835 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 140

Conread position: 145-608
Cow position: chr1:56477348-56477795 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 24

Conread position: 146-350
Cow position: chr1:51531527-51531720 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 146-372
Cow position: chr1:4293818-4294031 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 146-538
Cow position: chr1:92369470-92369870 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 23

Conread position: 146-614
Cow position: chr1:102105488-102105952 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 313
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 289, 91

Conread position: 147-539
Cow position: chr1:84239352-84238986 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 147-633
Cow position: chr1:71119266-71119755 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 148-353
Cow position: chr1:30504227-30504428 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 105, 21

Conread position: 148-497
Cow position: chr1:56634852-56635193 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 113

Conread position: 148-520
Cow position: chr1:88618348-88618714 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 137

Conread position: 148-539
Cow position: chr1:53671993-53671613 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 11

Conread position: 148-601
Cow position: chr1:10655233-10655679 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 146

Conread position: 148-626
Cow position: chr1:51445635-51446109 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 131

Conread position: 149-514
Cow position: chr1:3962927-3962575 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 244, 74

Conread position: 149-601
Cow position: chr1:97611896-97611471 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 8

Conread position: 149-603
Cow position: chr1:16962258-16961790 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 150-531
Cow position: chr1:25281918-25281528 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 132

Conread position: 150-626
Cow position: chr1:55229742-55230200 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 151-369
Cow position: chr1:20287876-20288091 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 19

Conread position: 151-381
Cow position: chr1:31235175-31234946 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 125

Conread position: 151-603
Cow position: chr1:70434751-70435190 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 142

Conread position: 152-582
Cow position: chr1:95056815-95057227 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 130

Conread position: 152-591
Cow position: chr1:71079193-71078770 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 22

Conread position: 152-622
Cow position: chr1:44506728-44507192 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 37

Conread position: 152-628
Cow position: chr1:7442745-7443211 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 25

Conread position: 153-346
Cow position: chr1:96635595-96635418 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 153-497
Cow position: chr1:26729489-26729809 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 342, 16

Conread position: 153-537
Cow position: chr1:40531348-40530967 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 35

Conread position: 153-592
Cow position: chr1:53328001-53327558 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 291
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 138, 86

Conread position: 154-323
Cow position: chr1:65637966-65638136 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 129

Conread position: 154-577
Cow position: chr1:51769847-51770273 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 56

Conread position: 154-591
Cow position: chr1:24597414-24597846 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 116, 86

Conread position: 155-380
Cow position: chr1:100512359-100512582 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 156-601
Cow position: chr1:4539675-4539217 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 296
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 73

Conread position: 156-607
Cow position: chr1:49317749-49317293 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 142

Conread position: 157-421
Cow position: chr1:64962890-64962648 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 158-590
Cow position: chr1:43389282-43388863 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 105

Conread position: 159-405
Cow position: chr1:95050333-95050084 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 196

Conread position: 159-537
Cow position: chr1:24729073-24728705 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 81, 58

Conread position: 159-585
Cow position: chr1:1499935-1499504 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 78

Conread position: 159-614
Cow position: chr1:3429742-3429298 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 305
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 30, 78

Conread position: 160-319
Cow position: chr1:99543281-99543126 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 160-472
Cow position: chr1:79278674-79278377 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 43

Conread position: 160-590
Cow position: chr1:4401915-4402339 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 280
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 267, 53

Conread position: 160-601
Cow position: chr1:10942324-10941896 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 160-601
Cow position: chr1:10964062-10964490 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 161-391
Cow position: chr1:101812506-101812279 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 37

Conread position: 161-592
Cow position: chr1:78809652-78810073 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 93

Conread position: 161-642
Cow position: chr1:70227933-70227448 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 321
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 69, 157

Conread position: 162-354
Cow position: chr1:86484727-86484923 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 12

Conread position: 162-628
Cow position: chr1:64804338-64803867 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 163-574
Cow position: chr1:88926609-88926204 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 70

Conread position: 163-591
Cow position: chr1:89381049-89381466 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 56

Conread position: 163-624
Cow position: chr1:89076865-89076398 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 163-630
Cow position: chr1:55705483-55705017 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 123

Conread position: 164-588
Cow position: chr1:43358243-43357817 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 126

Conread position: 164-607
Cow position: chr1:4691364-4691796 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 42

Conread position: 164-644
Cow position: chr1:52052932-52052485 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 310
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 417, 101

Conread position: 165-503
Cow position: chr1:7186560-7186889 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 130

Conread position: 165-600
Cow position: chr1:14981346-14980937 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 278
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 49

Conread position: 165-614
Cow position: chr1:26200993-26201449 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 115

Conread position: 166-365
Cow position: chr1:78154951-78154755 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 95

Conread position: 166-496
Cow position: chr1:69415943-69415617 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 8

Conread position: 166-599
Cow position: chr1:15333655-15334088 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 166-603
Cow position: chr1:27145880-27145440 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 120

Conread position: 167-601
Cow position: chr1:87072479-87072896 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 116

Conread position: 168-360
Cow position: chr1:5061797-5061991 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 142

Conread position: 169-435
Cow position: chr1:71952864-71953109 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 169-603
Cow position: chr1:70422077-70422506 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 123

Conread position: 169-603
Cow position: chr1:90976307-90975872 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 170-371
Cow position: chr1:55194686-55194489 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 170-603
Cow position: chr1:34771726-34771295 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 61

Conread position: 170-627
Cow position: chr1:86279193-86279650 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 307
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 339, 19

Conread position: 171-547
Cow position: chr1:93043804-93044162 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 69, 115

Conread position: 171-559
Cow position: chr1:52956038-52956406 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 322, 69

Conread position: 171-615
Cow position: chr1:98030693-98031129 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 69

Conread position: 172-544
Cow position: chr1:98461070-98461424 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 108

Conread position: 173-414
Cow position: chr1:45673492-45673728 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 35

Conread position: 173-600
Cow position: chr1:6305088-6304676 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 121

Conread position: 174-423
Cow position: chr1:98558002-98557763 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 144

Conread position: 174-485
Cow position: chr1:98310842-98311155 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 124

Conread position: 174-574
Cow position: chr1:49433483-49433086 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 83

Conread position: 175-313
Cow position: chr1:8287831-8287694 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 175-630
Cow position: chr1:26179032-26178574 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 147

Conread position: 177-434
Cow position: chr1:68995956-68996212 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 191

Conread position: 177-603
Cow position: chr1:74956239-74955828 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 107

Conread position: 178-434
Cow position: chr1:77502994-77502754 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 178-538
Cow position: chr1:19885170-19885517 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 65, 108

Conread position: 182-584
Cow position: chr1:99512463-99512078 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 334, 99

Conread position: 182-603
Cow position: chr1:89388122-89388547 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 15

Conread position: 182-614
Cow position: chr1:41289973-41289564 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 321, 28

Conread position: 183-421
Cow position: chr1:41954463-41954222 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 83, 209

Conread position: 183-625
Cow position: chr1:75382782-75383191 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 308
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 70, 111

Conread position: 184-327
Cow position: chr1:99570672-99570534 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 185-504
Cow position: chr1:101867148-101867452 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 206, 69

Conread position: 186-531
Cow position: chr1:94261341-94261664 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 186-611
Cow position: chr1:24542787-24542357 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 7

Conread position: 186-615
Cow position: chr1:5479894-5479442 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 303
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 10

Conread position: 187-601
Cow position: chr1:98619001-98619405 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 11

Conread position: 188-379
Cow position: chr1:47884037-47883833 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 188-413
Cow position: chr1:32013752-32013965 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 52

Conread position: 188-472
Cow position: chr1:95654920-95654643 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 98

Conread position: 188-509
Cow position: chr1:75141802-75142104 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 188-528
Cow position: chr1:100393369-100393037 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 65, 99

Conread position: 188-576
Cow position: chr1:86482699-86483084 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 14

Conread position: 188-603
Cow position: chr1:68862831-68863223 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 189-538
Cow position: chr1:62036597-62036937 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 67

Conread position: 190-366
Cow position: chr1:101207630-101207792 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 190-542
Cow position: chr1:69127370-69127026 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 105

Conread position: 190-590
Cow position: chr1:6867683-6867271 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 263
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 97

Conread position: 190-600
Cow position: chr1:28563771-28563360 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 89

Conread position: 190-601
Cow position: chr1:63138636-63139046 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 100

Conread position: 190-614
Cow position: chr1:4414410-4414012 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 291
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 273, 89

Conread position: 190-627
Cow position: chr1:46030555-46030134 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 324, 49

Conread position: 190-628
Cow position: chr1:96305171-96304748 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 191-351
Cow position: chr1:89438137-89437982 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 91

Conread position: 191-600
Cow position: chr1:43340824-43340432 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 52, 178

Conread position: 192-363
Cow position: chr1:49753730-49753895 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 192-496
Cow position: chr1:58825348-58825635 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 193-350
Cow position: chr1:7449933-7450084 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 193-428
Cow position: chr1:772022-771798 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 193-438
Cow position: chr1:81470929-81471169 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 93

Conread position: 193-601
Cow position: chr1:84906267-84905858 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 172, 97

Conread position: 194-360
Cow position: chr1:18697551-18697383 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 101

Conread position: 194-386
Cow position: chr1:51654212-51654399 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 195-600
Cow position: chr1:43872532-43872108 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 91

Conread position: 197-473
Cow position: chr1:89497770-89498024 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 197-486
Cow position: chr1:6788485-6788199 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 46, 89

Conread position: 197-614
Cow position: chr1:21955569-21955156 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 93

Conread position: 197-614
Cow position: chr1:65025061-65025475 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 16, 100

Conread position: 197-627
Cow position: chr1:70343844-70344275 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 87

Conread position: 198-367
Cow position: chr1:9533980-9534143 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 56

Conread position: 198-421
Cow position: chr1:82443651-82443435 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 0

Conread position: 198-531
Cow position: chr1:97696545-97696873 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 31

Conread position: 198-554
Cow position: chr1:32001515-32001167 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 61

Conread position: 199-592
Cow position: chr1:58754978-58754605 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 318, 32

Conread position: 199-593
Cow position: chr1:49082529-49082940 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 200-361
Cow position: chr1:83594000-83593838 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 85

Conread position: 200-382
Cow position: chr1:102113301-102113120 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 86

Conread position: 200-607
Cow position: chr1:85687992-85688393 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 278
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 58

Conread position: 200-623
Cow position: chr1:83072251-83072665 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 82

Conread position: 201-601
Cow position: chr1:25734662-25735070 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 201-603
Cow position: chr1:724543-724943 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 76

Conread position: 201-626
Cow position: chr1:13810457-13810883 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 291
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 93

Conread position: 203-607
Cow position: chr1:71227887-71228302 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 178

Conread position: 204-626
Cow position: chr1:31608087-31607668 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 206-361
Cow position: chr1:89082921-89083075 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 79

Conread position: 206-495
Cow position: chr1:43703228-43703502 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 247, 16

Conread position: 206-537
Cow position: chr1:97778808-97779126 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 120

Conread position: 206-593
Cow position: chr1:57880979-57880587 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 42, 88

Conread position: 206-601
Cow position: chr1:42398383-42397994 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 84

Conread position: 206-603
Cow position: chr1:61012123-61012510 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 80

Conread position: 206-606
Cow position: chr1:33207061-33206667 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 206-628
Cow position: chr1:54156927-54156505 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 146

Conread position: 208-436
Cow position: chr1:3243754-3243969 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 208-437
Cow position: chr1:99039537-99039320 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 208-531
Cow position: chr1:9013340-9013663 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 160

Conread position: 208-544
Cow position: chr1:75933088-75933411 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 317, 74

Conread position: 208-614
Cow position: chr1:86578764-86579189 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 76

Conread position: 208-616
Cow position: chr1:68763866-68763467 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 71

Conread position: 210-588
Cow position: chr1:65905190-65904806 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 81

Conread position: 212-600
Cow position: chr1:24778159-24777783 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 312, 28

Conread position: 212-615
Cow position: chr1:65318401-65318793 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 28

Conread position: 213-424
Cow position: chr1:85826166-85826369 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 8

Conread position: 213-603
Cow position: chr1:20667921-20667546 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 214-429
Cow position: chr1:24445807-24445600 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 61

Conread position: 214-539
Cow position: chr1:101836867-101837179 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 239, 69

Conread position: 215-360
Cow position: chr1:32596276-32596422 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 215-492
Cow position: chr1:95178773-95179044 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 82

Conread position: 215-590
Cow position: chr1:98453405-98453786 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 67

Conread position: 216-434
Cow position: chr1:80631522-80631730 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 79

Conread position: 216-611
Cow position: chr1:4055262-4055657 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 133, 24

Conread position: 217-598
Cow position: chr1:24581409-24581766 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 246
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 193, 11

Conread position: 217-614
Cow position: chr1:42545959-42545584 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 155, 37

Conread position: 218-531
Cow position: chr1:91875085-91874788 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 31, 52

Conread position: 218-535
Cow position: chr1:101701821-101701512 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 101

Conread position: 218-614
Cow position: chr1:90621689-90621288 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 283
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 69

Conread position: 218-630
Cow position: chr1:101866669-101866265 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 308, 13

Conread position: 219-614
Cow position: chr1:484639-484246 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 35

Conread position: 219-625
Cow position: chr1:23186969-23186577 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 220-524
Cow position: chr1:24876093-24876384 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 58, 0

Conread position: 221-407
Cow position: chr1:81638231-81638410 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 221-603
Cow position: chr1:51417605-51417969 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 34

Conread position: 222-513
Cow position: chr1:12978506-12978793 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 32, 64

Conread position: 222-603
Cow position: chr1:59518750-59519115 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 223-434
Cow position: chr1:20544127-20544332 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 199, 5

Conread position: 223-532
Cow position: chr1:77133590-77133882 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 223-533
Cow position: chr1:101632508-101632205 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 298, 59

Conread position: 223-591
Cow position: chr1:87095399-87095019 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 5

Conread position: 223-601
Cow position: chr1:55429124-55428751 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 5

Conread position: 223-603
Cow position: chr1:16061188-16060804 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 32

Conread position: 223-603
Cow position: chr1:22525711-22526078 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 10, 18

Conread position: 224-593
Cow position: chr1:19568680-19569049 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 36

Conread position: 228-542
Cow position: chr1:67305405-67305099 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 196, 62

Conread position: 228-542
Cow position: chr1:74927716-74928024 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 95

Conread position: 228-600
Cow position: chr1:95557872-95558240 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 219, 54

Conread position: 228-601
Cow position: chr1:49077507-49077121 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 62

Conread position: 228-611
Cow position: chr1:38753753-38754129 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 228-614
Cow position: chr1:76613295-76612916 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 5, 13

Conread position: 228-615
Cow position: chr1:44075870-44075509 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 359, 12

Conread position: 228-627
Cow position: chr1:25386887-25387273 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 264
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 284, 23

Conread position: 228-630
Cow position: chr1:101268172-101267772 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 28

Conread position: 228-635
Cow position: chr1:7748053-7748453 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 226, 62

Conread position: 228-635
Cow position: chr1:7752219-7752617 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 226, 62

Conread position: 229-482
Cow position: chr1:102291317-102291067 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 56

Conread position: 230-514
Cow position: chr1:60281208-60281485 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 230-536
Cow position: chr1:3882627-3882325 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 159, 52

Conread position: 232-627
Cow position: chr1:42175564-42175956 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 303, 50

Conread position: 233-601
Cow position: chr1:14309197-14308827 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 298, 57

Conread position: 235-595
Cow position: chr1:33409785-33409427 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 306, 55

Conread position: 235-601
Cow position: chr1:70428561-70428939 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 37

Conread position: 236-539
Cow position: chr1:93554687-93554973 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 236-584
Cow position: chr1:3419645-3419992 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 55

Conread position: 236-608
Cow position: chr1:14206312-14205955 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 47

Conread position: 236-624
Cow position: chr1:22192607-22192995 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 46

Conread position: 236-628
Cow position: chr1:83659430-83659049 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 153, 54

Conread position: 240-371
Cow position: chr1:65909374-65909502 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 241-429
Cow position: chr1:51684652-51684834 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 138, 13

Conread position: 241-523
Cow position: chr1:2737049-2737321 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 216, 41

Conread position: 241-524
Cow position: chr1:20732551-20732826 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 86

Conread position: 241-537
Cow position: chr1:98413615-98413905 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 78

Conread position: 241-538
Cow position: chr1:41115866-41115583 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 253, 41

Conread position: 241-539
Cow position: chr1:57420879-57420599 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 241-603
Cow position: chr1:86682714-86682364 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 41

Conread position: 241-614
Cow position: chr1:76740835-76740456 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 123

Conread position: 241-624
Cow position: chr1:62519206-62519595 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 241-626
Cow position: chr1:86110882-86110517 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 41

Conread position: 242-602
Cow position: chr1:19970751-19970391 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 130, 40

Conread position: 242-614
Cow position: chr1:88913167-88913536 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 242-628
Cow position: chr1:31272591-31272231 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 242-630
Cow position: chr1:96081334-96081701 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 283, 40

Conread position: 243-539
Cow position: chr1:23512804-23512524 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 243-579
Cow position: chr1:91811638-91811962 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 256, 39

Conread position: 243-628
Cow position: chr1:14759499-14759127 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 211, 13

Conread position: 244-535
Cow position: chr1:85647930-85647649 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 245-603
Cow position: chr1:91023615-91023264 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 282, 37

Conread position: 245-611
Cow position: chr1:635834-635472 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 296, 7

Conread position: 245-621
Cow position: chr1:87197680-87198054 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 37

Conread position: 247-590
Cow position: chr1:6228730-6228390 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 199, 42

Conread position: 247-625
Cow position: chr1:29451773-29452150 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 261, 43

Conread position: 248-425
Cow position: chr1:12988901-12989075 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 121, 34

Conread position: 248-603
Cow position: chr1:8129111-8128774 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 248, 19

Conread position: 251-588
Cow position: chr1:2976136-2975800 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 21

Conread position: 253-593
Cow position: chr1:101983292-101982956 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 264, 37

Conread position: 256-385
Cow position: chr1:90595691-90595566 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 256-469
Cow position: chr1:87440332-87440535 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 256-518
Cow position: chr1:43822261-43822515 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 37

Conread position: 256-548
Cow position: chr1:89230364-89230080 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 236, 23

Conread position: 256-599
Cow position: chr1:4243479-4243130 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 150, 26

Conread position: 256-600
Cow position: chr1:20950585-20950918 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 269, 26

Conread position: 256-600
Cow position: chr1:39225061-39224738 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 256-601
Cow position: chr1:92997035-92996684 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 16

Conread position: 256-617
Cow position: chr1:89448761-89449114 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 257-556
Cow position: chr1:86073459-86073750 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 257-593
Cow position: chr1:97090192-97090511 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 257-621
Cow position: chr1:47886624-47886261 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 36

Conread position: 259-542
Cow position: chr1:85550211-85549940 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 259-606
Cow position: chr1:78838665-78838994 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 260-606
Cow position: chr1:64572381-64572721 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 22

Conread position: 260-624
Cow position: chr1:5010972-5010608 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 167, 30

Conread position: 260-637
Cow position: chr1:35600429-35600052 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 129, 5

Conread position: 261-601
Cow position: chr1:6294629-6294292 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 29

Conread position: 261-611
Cow position: chr1:95662465-95662799 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 342, 45

Conread position: 265-623
Cow position: chr1:4701800-4701447 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 151, 24

Conread position: 266-607
Cow position: chr1:47790794-47790459 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 41

Conread position: 270-598
Cow position: chr1:72813490-72813817 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 12

Conread position: 270-627
Cow position: chr1:84104176-84103832 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 12

Conread position: 271-615
Cow position: chr1:77986544-77986200 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 11

Conread position: 272-631
Cow position: chr1:101715209-101714852 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 234
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 85

Conread position: 273-539
Cow position: chr1:78697891-78697636 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 0

Conread position: 273-539
Cow position: chr1:100569032-100569293 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 273-541
Cow position: chr1:80422157-80422411 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 273-600
Cow position: chr1:67585426-67585752 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 21

Conread position: 273-621
Cow position: chr1:71666061-71665710 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 19, 82

Conread position: 274-627
Cow position: chr1:95637711-95638064 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 242, 16

Conread position: 275-614
Cow position: chr1:71399165-71399508 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 113, 15

Conread position: 276-601
Cow position: chr1:48605912-48606236 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 36

Conread position: 276-622
Cow position: chr1:68710150-68710507 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 276-628
Cow position: chr1:41138250-41137913 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 225, 12

Conread position: 279-536
Cow position: chr1:79660519-79660268 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 280-614
Cow position: chr1:77424986-77425328 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 177, 73

Conread position: 281-514
Cow position: chr1:61543033-61542807 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 220, 95

Conread position: 281-531
Cow position: chr1:98511815-98512055 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 281-603
Cow position: chr1:100576156-100575837 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 95

Conread position: 283-522
Cow position: chr1:3352807-3352580 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 283-533
Cow position: chr1:87936786-87937029 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 243, 89

Conread position: 283-539
Cow position: chr1:5539387-5539139 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 95, 40

Conread position: 283-539
Cow position: chr1:81580063-81580314 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 10

Conread position: 283-606
Cow position: chr1:5876574-5876256 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 72

Conread position: 283-614
Cow position: chr1:31795116-31794792 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 40

Conread position: 283-625
Cow position: chr1:98583650-98583973 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 153, 39

Conread position: 283-634
Cow position: chr1:5637189-5636838 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 89, 82

Conread position: 284-566
Cow position: chr1:95296722-95296437 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 143, 85

Conread position: 284-603
Cow position: chr1:56225682-56225986 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 7

Conread position: 284-607
Cow position: chr1:86340583-86340248 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 25

Conread position: 285-465
Cow position: chr1:8984796-8984619 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 130, 65

Conread position: 285-537
Cow position: chr1:7023009-7023256 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 285-539
Cow position: chr1:45553355-45553106 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 285-598
Cow position: chr1:6826400-6826093 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 238, 51

Conread position: 285-598
Cow position: chr1:69551595-69551281 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 188, 31

Conread position: 285-603
Cow position: chr1:261590-261260 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 191, 37

Conread position: 285-603
Cow position: chr1:20104157-20104470 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 205, 71

Conread position: 285-603
Cow position: chr1:56618762-56618452 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 285-605
Cow position: chr1:65028418-65028726 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 80

Conread position: 285-607
Cow position: chr1:10716391-10716713 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 250, 47

Conread position: 285-618
Cow position: chr1:3607699-3608014 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 323, 99

Conread position: 285-624
Cow position: chr1:42482092-42482425 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 244, 71

Conread position: 285-624
Cow position: chr1:98059938-98060283 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 86, 138

Conread position: 286-537
Cow position: chr1:48769694-48769938 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 13

Conread position: 286-537
Cow position: chr1:92989479-92989725 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 167, 83

Conread position: 286-590
Cow position: chr1:17196740-17196434 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 235, 99

Conread position: 286-592
Cow position: chr1:47288130-47288437 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 167, 106

Conread position: 286-595
Cow position: chr1:37726522-37726218 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 213, 11

Conread position: 286-598
Cow position: chr1:43311886-43311573 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 198, 52

Conread position: 286-601
Cow position: chr1:27463021-27463330 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 286-603
Cow position: chr1:11172265-11172572 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 257, 86

Conread position: 286-605
Cow position: chr1:43855191-43855495 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 95, 0

Conread position: 286-614
Cow position: chr1:79640401-79640073 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 84

Conread position: 286-633
Cow position: chr1:91651470-91651115 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 87

Conread position: 287-539
Cow position: chr1:8347015-8347260 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 287-567
Cow position: chr1:50964238-50963959 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 166, 37

Conread position: 287-624
Cow position: chr1:3130632-3130325 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 35

Conread position: 287-626
Cow position: chr1:8374561-8374229 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 257, 22

Conread position: 288-538
Cow position: chr1:6972421-6972663 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 243, 87

Conread position: 288-630
Cow position: chr1:82880536-82880858 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 97

Conread position: 288-634
Cow position: chr1:71350833-71350485 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 52

Conread position: 289-531
Cow position: chr1:5579947-5580184 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 89

Conread position: 289-603
Cow position: chr1:3605985-3605685 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 48

Conread position: 289-624
Cow position: chr1:77425719-77425388 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 259, 73

Conread position: 290-537
Cow position: chr1:1964636-1964878 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 80

Conread position: 290-639
Cow position: chr1:648218-648568 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 241, 71

Conread position: 293-593
Cow position: chr1:88397943-88397648 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 248, 43

Conread position: 293-601
Cow position: chr1:4391386-4391066 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 96, 79

Conread position: 294-582
Cow position: chr1:89785809-89786089 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 277, 75

Conread position: 294-633
Cow position: chr1:10616778-10617126 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 133, 75

Conread position: 295-508
Cow position: chr1:19227156-19226950 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 197, 44

Conread position: 295-594
Cow position: chr1:24406995-24406719 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 295-601
Cow position: chr1:46030858-46031163 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 216, 67

Conread position: 295-603
Cow position: chr1:22823804-22824113 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 27

Conread position: 295-613
Cow position: chr1:24909154-24908831 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 121, 44

Conread position: 295-628
Cow position: chr1:81477971-81477632 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 220
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 206, 27

Conread position: 296-539
Cow position: chr1:77232668-77232443 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 296-603
Cow position: chr1:82513456-82513148 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 222, 74

Conread position: 297-539
Cow position: chr1:26895075-26894835 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 32

Conread position: 297-601
Cow position: chr1:22944125-22943826 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 219, 63

Conread position: 297-601
Cow position: chr1:72105312-72105602 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 297-630
Cow position: chr1:75250013-75250344 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 21

Conread position: 298-627
Cow position: chr1:102306243-102305920 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 74

Conread position: 298-652
Cow position: chr1:38418934-38419280 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 233, 25

Conread position: 299-614
Cow position: chr1:30189049-30189374 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 113, 88

Conread position: 299-626
Cow position: chr1:58347521-58347193 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 67

Conread position: 302-539
Cow position: chr1:58186651-58186889 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 63

Conread position: 302-555
Cow position: chr1:26616169-26615927 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 302-603
Cow position: chr1:627867-628172 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 67

Conread position: 303-627
Cow position: chr1:90904847-90904530 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 223, 64

Conread position: 304-603
Cow position: chr1:49825162-49824861 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 131, 85

Conread position: 304-607
Cow position: chr1:17875803-17875505 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 305-533
Cow position: chr1:4581418-4581200 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 305-626
Cow position: chr1:29474437-29474128 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 218, 17

Conread position: 306-539
Cow position: chr1:50991844-50992073 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 216, 46

Conread position: 307-611
Cow position: chr1:79135190-79135492 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 16

Conread position: 308-602
Cow position: chr1:100474143-100474442 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 217, 66

Conread position: 311-539
Cow position: chr1:95153134-95153359 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 65

Conread position: 311-614
Cow position: chr1:78079635-78079940 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 189, 54

Conread position: 312-584
Cow position: chr1:33913736-33914016 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 63

Conread position: 313-607
Cow position: chr1:42869022-42868742 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 33, 63

Conread position: 313-614
Cow position: chr1:61846062-61846373 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 217, 49

Conread position: 314-613
Cow position: chr1:22147142-22147429 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 51

Conread position: 314-613
Cow position: chr1:73458176-73457881 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 188, 51

Conread position: 314-643
Cow position: chr1:78096842-78097163 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 212, 61

Conread position: 316-574
Cow position: chr1:37124045-37124302 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 53

Conread position: 316-633
Cow position: chr1:69227530-69227215 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 70, 53

Conread position: 318-613
Cow position: chr1:52467223-52467501 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 284, 57

Conread position: 319-611
Cow position: chr1:26934344-26934057 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 50

Conread position: 320-533
Cow position: chr1:58036943-58037149 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 323-614
Cow position: chr1:102753779-102754065 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 51

Conread position: 323-624
Cow position: chr1:53402708-53403009 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 91

Conread position: 326-539
Cow position: chr1:68672670-68672465 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 326-585
Cow position: chr1:89158200-89157944 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 64

Conread position: 326-592
Cow position: chr1:2971840-2972113 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 65

Conread position: 326-600
Cow position: chr1:35671471-35671737 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 38

Conread position: 327-592
Cow position: chr1:45223510-45223769 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 328-599
Cow position: chr1:6394490-6394757 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 34

Conread position: 328-600
Cow position: chr1:30983559-30983291 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 174, 41

Conread position: 328-613
Cow position: chr1:19515683-19515403 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 125, 35

Conread position: 329-602
Cow position: chr1:46143530-46143264 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 241, 40

Conread position: 329-614
Cow position: chr1:52139700-52139413 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 98, 40

Conread position: 330-627
Cow position: chr1:6589974-6590265 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 200, 35

Conread position: 331-539
Cow position: chr1:98575980-98576184 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 331-596
Cow position: chr1:95072264-95072540 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 193, 34

Conread position: 331-603
Cow position: chr1:54267999-54267734 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 197, 25

Conread position: 332-601
Cow position: chr1:51609309-51609580 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 209, 52

Conread position: 332-625
Cow position: chr1:71770383-71770077 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 333-600
Cow position: chr1:33998693-33998950 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 334-614
Cow position: chr1:48206598-48206323 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 59, 29

Conread position: 336-638
Cow position: chr1:30862472-30862167 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 178, 28

Conread position: 337-601
Cow position: chr1:30035153-30035426 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 53

Conread position: 339-535
Cow position: chr1:99221412-99221223 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 339-574
Cow position: chr1:44946700-44946927 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 187, 31

Conread position: 339-598
Cow position: chr1:79003916-79004175 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 174, 37

Conread position: 339-603
Cow position: chr1:77739658-77739929 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 166

Conread position: 339-606
Cow position: chr1:62235505-62235249 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 34

Conread position: 339-614
Cow position: chr1:22035551-22035823 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 33

Conread position: 339-614
Cow position: chr1:79718743-79719022 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 40, 101

Conread position: 339-614
Cow position: chr1:101507300-101507565 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 36

Conread position: 339-617
Cow position: chr1:78066596-78066321 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 185, 36

Conread position: 340-533
Cow position: chr1:95974338-95974530 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 154, 165

Conread position: 340-614
Cow position: chr1:86688212-86687946 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 341-603
Cow position: chr1:81481440-81481182 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 341-614
Cow position: chr1:36688437-36688165 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 23

Conread position: 342-614
Cow position: chr1:70175596-70175325 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 23

Conread position: 342-627
Cow position: chr1:50432542-50432252 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 27

Conread position: 342-637
Cow position: chr1:81390862-81391161 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 169, 132

Conread position: 342-641
Cow position: chr1:52662229-52661936 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 192, 33

Conread position: 342-648
Cow position: chr1:37695964-37695651 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 46

Conread position: 343-595
Cow position: chr1:97717630-97717380 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 344-637
Cow position: chr1:73903973-73904269 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 197, 83

Conread position: 345-598
Cow position: chr1:500121-500375 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 199, 31

Conread position: 345-611
Cow position: chr1:57089735-57089466 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 46

Conread position: 346-607
Cow position: chr1:99322620-99322362 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 48

Conread position: 347-611
Cow position: chr1:52912948-52912680 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 194, 18

Conread position: 350-607
Cow position: chr1:73020709-73020453 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 181, 10

Conread position: 350-614
Cow position: chr1:60044939-60045200 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 166, 25

Conread position: 350-628
Cow position: chr1:74751682-74751400 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 24

Conread position: 357-600
Cow position: chr1:95835843-95835594 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 169, 0

Conread position: 357-633
Cow position: chr1:1496577-1496294 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 30

Conread position: 359-614
Cow position: chr1:8287670-8287415 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 163, 14

Conread position: 360-635
Cow position: chr1:67919095-67919365 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 257, 30

Conread position: 361-600
Cow position: chr1:73721321-73721565 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 29

Conread position: 362-628
Cow position: chr1:55753253-55752988 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 240, 27

Conread position: 363-631
Cow position: chr1:92523977-92524252 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 178, 27

Conread position: 366-574
Cow position: chr1:49334430-49334214 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 69

Conread position: 370-606
Cow position: chr1:3965806-3966036 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 372-639
Cow position: chr1:36079793-36080066 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 237

Conread position: 373-607
Cow position: chr1:71790177-71789940 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 175, 113

Conread position: 374-599
Cow position: chr1:67529029-67529256 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 77, 16

Conread position: 375-601
Cow position: chr1:150952-150722 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 213

Conread position: 375-614
Cow position: chr1:90267693-90267939 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 40

Conread position: 376-603
Cow position: chr1:80584404-80584632 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 150, 124

Conread position: 376-610
Cow position: chr1:31819085-31819314 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 159, 71

Conread position: 376-623
Cow position: chr1:81515207-81515461 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 153, 238

Conread position: 376-627
Cow position: chr1:21560988-21561248 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 14

Conread position: 377-603
Cow position: chr1:98911985-98912212 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 124, 12

Conread position: 377-614
Cow position: chr1:100852684-100852917 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 179

Conread position: 377-628
Cow position: chr1:38706877-38706625 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 160, 13

Conread position: 377-631
Cow position: chr1:100823014-100823269 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 14

Conread position: 378-587
Cow position: chr1:96019206-96019420 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 55

Conread position: 378-591
Cow position: chr1:83025186-83024973 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 11

Conread position: 378-600
Cow position: chr1:41027051-41027273 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 118, 65

Conread position: 378-603
Cow position: chr1:72092647-72092419 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 65

Conread position: 378-603
Cow position: chr1:102468640-102468418 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 176, 18

Conread position: 378-614
Cow position: chr1:17055970-17056205 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 151, 65

Conread position: 379-603
Cow position: chr1:102648254-102648484 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 381-600
Cow position: chr1:2462362-2462572 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 62

Conread position: 384-594
Cow position: chr1:61011163-61011370 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 150, 0

Conread position: 387-573
Cow position: chr1:6031609-6031801 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 0

Conread position: 388-603
Cow position: chr1:14006102-14006329 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 67

Conread position: 388-603
Cow position: chr1:85818237-85818455 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 195

Conread position: 388-603
Cow position: chr1:89871953-89872172 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 37

Conread position: 388-613
Cow position: chr1:67654334-67654110 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 130, 184

Conread position: 388-614
Cow position: chr1:45315650-45315414 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 0

Conread position: 388-625
Cow position: chr1:31572763-31572510 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 63

Conread position: 388-635
Cow position: chr1:759432-759176 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 156, 0

Conread position: 389-609
Cow position: chr1:93590599-93590380 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 137, 184

Conread position: 390-539
Cow position: chr1:67918745-67918894 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 390-598
Cow position: chr1:95156976-95156766 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 390-603
Cow position: chr1:73551521-73551298 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 5

Conread position: 391-539
Cow position: chr1:19304561-19304707 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 391-592
Cow position: chr1:62034839-62034642 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 77

Conread position: 391-600
Cow position: chr1:63078999-63079202 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 391-600
Cow position: chr1:86057082-86056877 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 391-603
Cow position: chr1:66752640-66752428 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 391-608
Cow position: chr1:6790764-6790982 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 150, 24

Conread position: 391-612
Cow position: chr1:81858913-81858688 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 391-614
Cow position: chr1:95618631-95618853 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 209

Conread position: 391-623
Cow position: chr1:13157174-13157418 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 36, 58

Conread position: 391-625
Cow position: chr1:242546-242781 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 221, 147

Conread position: 391-625
Cow position: chr1:97144475-97144242 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 56

Conread position: 392-603
Cow position: chr1:33846579-33846366 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 51

Conread position: 392-603
Cow position: chr1:68688573-68688783 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 146, 0

Conread position: 392-606
Cow position: chr1:22461248-22461030 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 392-626
Cow position: chr1:4444852-4444614 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 51

Conread position: 393-600
Cow position: chr1:24530493-24530699 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 393-614
Cow position: chr1:96558859-96558630 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 396-539
Cow position: chr1:64019527-64019384 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 396-585
Cow position: chr1:69940829-69940638 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 98

Conread position: 396-599
Cow position: chr1:852164-852373 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 0

Conread position: 396-600
Cow position: chr1:49980704-49980909 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 61

Conread position: 396-614
Cow position: chr1:21681543-21681318 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 47

Conread position: 396-614
Cow position: chr1:97540629-97540852 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 47

Conread position: 396-615
Cow position: chr1:29329535-29329762 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 396-625
Cow position: chr1:4582545-4582774 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 131, 53

Conread position: 396-627
Cow position: chr1:95152865-95153099 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 145, 217

Conread position: 396-638
Cow position: chr1:87083623-87083872 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 183

Conread position: 397-600
Cow position: chr1:6381767-6381977 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 87

Conread position: 397-603
Cow position: chr1:89158702-89158504 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 130, 30

Conread position: 397-611
Cow position: chr1:99605192-99604980 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 132, 175

Conread position: 397-631
Cow position: chr1:9637024-9637262 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 100

Conread position: 398-601
Cow position: chr1:72422412-72422204 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 68

Conread position: 398-603
Cow position: chr1:102768177-102768379 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 134, 50

Conread position: 399-539
Cow position: chr1:92603016-92603156 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 399-603
Cow position: chr1:48618247-48618043 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 400-603
Cow position: chr1:76518420-76518628 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 131, 201

Conread position: 401-614
Cow position: chr1:5751312-5751530 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 42

Conread position: 402-600
Cow position: chr1:100573627-100573427 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 402-603
Cow position: chr1:6731180-6731383 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 0

Conread position: 402-603
Cow position: chr1:56913529-56913328 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 121, 98

Conread position: 403-598
Cow position: chr1:69691714-69691512 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 404-600
Cow position: chr1:82336680-82336872 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 95

Conread position: 405-607
Cow position: chr1:15875663-15875868 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 0

Conread position: 407-606
Cow position: chr1:25022070-25021871 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 407-627
Cow position: chr1:81364265-81364493 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 407-633
Cow position: chr1:85339392-85339613 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 205, 40

Conread position: 409-614
Cow position: chr1:30948999-30949196 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 409-614
Cow position: chr1:71946077-71945862 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 167

Conread position: 409-631
Cow position: chr1:70483327-70483104 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 117, 209

Conread position: 410-587
Cow position: chr1:31630279-31630095 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 410-593
Cow position: chr1:23633924-23633733 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 410-603
Cow position: chr1:34001055-34001247 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 33

Conread position: 410-603
Cow position: chr1:55685970-55685774 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 39

Conread position: 410-603
Cow position: chr1:87149807-87149612 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 22

Conread position: 410-607
Cow position: chr1:97536296-97536486 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 35

Conread position: 410-613
Cow position: chr1:81473163-81473372 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 33

Conread position: 410-625
Cow position: chr1:69411690-69411469 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 160

Conread position: 410-644
Cow position: chr1:52450779-52451005 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 411-539
Cow position: chr1:46100831-46100703 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 411-603
Cow position: chr1:65030076-65030274 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 32

Conread position: 411-608
Cow position: chr1:85622538-85622741 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 32

Conread position: 411-614
Cow position: chr1:31340762-31340552 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 32

Conread position: 415-600
Cow position: chr1:95049853-95049664 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 107, 162

Conread position: 415-621
Cow position: chr1:42774924-42775128 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 7

Conread position: 416-581
Cow position: chr1:69532509-69532344 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 27

Conread position: 416-592
Cow position: chr1:78793989-78793810 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 416-592
Cow position: chr1:81668803-81668619 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 27

Conread position: 416-601
Cow position: chr1:84815143-84815336 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 187

Conread position: 416-603
Cow position: chr1:40303565-40303752 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 27

Conread position: 416-614
Cow position: chr1:4294358-4294563 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 88

Conread position: 416-614
Cow position: chr1:96518707-96518918 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 27

Conread position: 416-616
Cow position: chr1:94823378-94823173 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 195

Conread position: 416-620
Cow position: chr1:29671210-29671000 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 167

Conread position: 416-623
Cow position: chr1:63994541-63994331 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 104, 0

Conread position: 417-592
Cow position: chr1:63905244-63905071 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 417-601
Cow position: chr1:20537220-20537404 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 417-603
Cow position: chr1:84594903-84595095 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 417-606
Cow position: chr1:81638563-81638746 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 417-611
Cow position: chr1:58420218-58420410 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 417-614
Cow position: chr1:15628297-15628494 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 26

Conread position: 417-614
Cow position: chr1:95703820-95704019 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 54

Conread position: 418-615
Cow position: chr1:77685965-77685762 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 418-624
Cow position: chr1:49297667-49297876 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 419-614
Cow position: chr1:524825-525022 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 98

Conread position: 419-625
Cow position: chr1:102730745-102730526 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 420-611
Cow position: chr1:97986431-97986231 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 421-603
Cow position: chr1:98415606-98415797 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 22

Conread position: 423-628
Cow position: chr1:11708997-11708796 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 77

Conread position: 426-619
Cow position: chr1:71636299-71636108 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 121, 78

Conread position: 431-614
Cow position: chr1:52384937-52385126 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 12

Conread position: 441-607
Cow position: chr1:7313650-7313477 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 446-613
Cow position: chr1:76909715-76909879 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 5

Conread position: 449-600
Cow position: chr1:40284592-40284448 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 449-603
Cow position: chr1:83969-84115 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 449-614
Cow position: chr1:39684097-39683926 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 39

Conread position: 449-614
Cow position: chr1:77810712-77810548 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 449-614
Cow position: chr1:90192463-90192635 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 449-626
Cow position: chr1:89146828-89146645 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 449-627
Cow position: chr1:84782704-84782523 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 164

Conread position: 450-557
Cow position: chr1:67539607-67539720 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 450-590
Cow position: chr1:45505879-45505741 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 70

Conread position: 450-592
Cow position: chr1:40181577-40181428 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 450-592
Cow position: chr1:61134460-61134608 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 450-593
Cow position: chr1:78034856-78034711 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 33

Conread position: 450-595
Cow position: chr1:23372907-23373057 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 68

Conread position: 450-598
Cow position: chr1:101280690-101280539 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 147

Conread position: 450-599
Cow position: chr1:32014244-32014391 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 450-600
Cow position: chr1:25955943-25956097 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 450-600
Cow position: chr1:84787318-84787461 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 450-601
Cow position: chr1:1380045-1380203 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 450-601
Cow position: chr1:22231696-22231853 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 450-601
Cow position: chr1:32217290-32217440 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 450-601
Cow position: chr1:44321550-44321395 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 450-601
Cow position: chr1:46245692-46245534 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 31

Conread position: 450-603
Cow position: chr1:771732-771585 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 450-603
Cow position: chr1:19599313-19599156 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 54

Conread position: 450-603
Cow position: chr1:32035662-32035510 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 123

Conread position: 450-603
Cow position: chr1:36018735-36018580 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 136

Conread position: 450-603
Cow position: chr1:48301403-48301247 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 125

Conread position: 450-603
Cow position: chr1:75227272-75227121 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 450-603
Cow position: chr1:87934223-87934076 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 450-603
Cow position: chr1:98557071-98556914 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 450-603
Cow position: chr1:99637206-99637047 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 450-603
Cow position: chr1:101789045-101788893 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 89, 77

Conread position: 450-604
Cow position: chr1:47966975-47966815 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 450-605
Cow position: chr1:70044401-70044550 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 450-606
Cow position: chr1:73534593-73534435 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 61

Conread position: 450-607
Cow position: chr1:3666983-3666824 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 450-607
Cow position: chr1:11489111-11488951 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 127

Conread position: 450-613
Cow position: chr1:26984057-26984228 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 450-613
Cow position: chr1:46795806-46795970 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 14

Conread position: 450-614
Cow position: chr1:731925-731755 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 130

Conread position: 450-614
Cow position: chr1:43379314-43379146 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 450-614
Cow position: chr1:67674555-67674393 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 450-614
Cow position: chr1:82537975-82538143 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 450-614
Cow position: chr1:98380249-98380079 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 91, 56

Conread position: 450-614
Cow position: chr1:100512943-100513110 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 46

Conread position: 450-614
Cow position: chr1:102797950-102797784 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 126

Conread position: 450-615
Cow position: chr1:64421589-64421751 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 450-615
Cow position: chr1:74919931-74919757 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 450-621
Cow position: chr1:20871511-20871334 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 450-622
Cow position: chr1:71664849-71664670 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 450-622
Cow position: chr1:92188005-92188185 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 450-624
Cow position: chr1:89437670-89437500 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 150, 32

Conread position: 450-625
Cow position: chr1:43296671-43296483 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 450-627
Cow position: chr1:41022467-41022646 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 450-628
Cow position: chr1:81471403-81471575 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 158, 24

Conread position: 450-628
Cow position: chr1:90879688-90879511 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 36

Conread position: 450-629
Cow position: chr1:42796925-42797114 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 450-629
Cow position: chr1:79178676-79178864 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 450-632
Cow position: chr1:10523748-10523930 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 68

Conread position: 450-635
Cow position: chr1:46004329-46004508 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 451-600
Cow position: chr1:69442469-69442314 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 451-601
Cow position: chr1:54569747-54569903 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 451-601
Cow position: chr1:78784855-78784699 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 451-603
Cow position: chr1:59551486-59551643 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 451-605
Cow position: chr1:47190946-47190787 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 88, 138

Conread position: 451-606
Cow position: chr1:6873860-6874022 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 451-607
Cow position: chr1:41953953-41953791 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 451-607
Cow position: chr1:56719389-56719548 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 43

Conread position: 451-608
Cow position: chr1:42152429-42152281 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 451-609
Cow position: chr1:51860512-51860353 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 154, 0

Conread position: 451-614
Cow position: chr1:22828521-22828358 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 451-614
Cow position: chr1:34324007-34323841 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 451-626
Cow position: chr1:1802216-1802393 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 142

Conread position: 451-626
Cow position: chr1:95829084-95828908 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 124

Conread position: 451-627
Cow position: chr1:83677275-83677095 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 451-627
Cow position: chr1:95675723-95675902 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 127

Conread position: 451-628
Cow position: chr1:5284183-5283998 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 163

Conread position: 451-628
Cow position: chr1:45579596-45579411 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 452-599
Cow position: chr1:100800718-100800569 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 452-601
Cow position: chr1:94713115-94712961 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 63

Conread position: 452-602
Cow position: chr1:4329853-4329706 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 55

Conread position: 452-603
Cow position: chr1:7965896-7966051 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 452-613
Cow position: chr1:89835767-89835924 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 452-615
Cow position: chr1:37470551-37470707 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 452-616
Cow position: chr1:36887277-36887113 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 452-627
Cow position: chr1:42592236-42592058 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 21

Conread position: 452-628
Cow position: chr1:81615704-81615879 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 53

Conread position: 452-633
Cow position: chr1:91743412-91743235 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 144

Conread position: 453-591
Cow position: chr1:22394624-22394481 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 453-600
Cow position: chr1:92363612-92363469 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 453-606
Cow position: chr1:19384405-19384250 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 453-613
Cow position: chr1:30469832-30469998 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 453-614
Cow position: chr1:60403817-60403984 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 454-603
Cow position: chr1:63460930-63461082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 62

Conread position: 454-612
Cow position: chr1:10470478-10470635 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 456-601
Cow position: chr1:74305028-74304877 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 456-603
Cow position: chr1:30028178-30028028 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 456-603
Cow position: chr1:90820424-90820276 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 10

Conread position: 456-603
Cow position: chr1:95976387-95976537 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 456-606
Cow position: chr1:62182076-62181932 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 456-607
Cow position: chr1:55260182-55260026 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 456-621
Cow position: chr1:80423678-80423508 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 52

Conread position: 456-626
Cow position: chr1:31801865-31801695 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 98

Conread position: 456-627
Cow position: chr1:1489353-1489176 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 456-627
Cow position: chr1:51968591-51968753 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 456-640
Cow position: chr1:31274936-31274745 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 457-596
Cow position: chr1:38055446-38055308 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 137, 114

Conread position: 457-614
Cow position: chr1:4362002-4361837 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 457-628
Cow position: chr1:52509711-52509535 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 111

Conread position: 457-641
Cow position: chr1:70416705-70416518 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 458-624
Cow position: chr1:62469116-62469283 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 458-625
Cow position: chr1:76739854-76739683 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 145, 105

Conread position: 458-642
Cow position: chr1:66445018-66445200 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 151, 113

Conread position: 459-599
Cow position: chr1:73398017-73397871 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 459-603
Cow position: chr1:50585819-50585672 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 459-603
Cow position: chr1:53474213-53474352 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 459-623
Cow position: chr1:80870435-80870604 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 152

Conread position: 459-627
Cow position: chr1:50906623-50906452 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 459-628
Cow position: chr1:91649361-91649186 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 459-630
Cow position: chr1:39095545-39095715 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 121

Conread position: 460-614
Cow position: chr1:20202361-20202516 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 44

Conread position: 461-595
Cow position: chr1:67743677-67743542 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 461-603
Cow position: chr1:716528-716381 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 461-614
Cow position: chr1:50765670-50765829 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 461-614
Cow position: chr1:83246484-83246643 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 461-623
Cow position: chr1:3535129-3535293 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 45

Conread position: 461-626
Cow position: chr1:1915968-1915800 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 39

Conread position: 461-643
Cow position: chr1:83222043-83222234 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 118

Conread position: 462-601
Cow position: chr1:65160188-65160332 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 21

Conread position: 462-615
Cow position: chr1:31806921-31807072 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 110

Conread position: 462-630
Cow position: chr1:89213293-89213119 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 140

Conread position: 463-603
Cow position: chr1:98742078-98742220 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 463-615
Cow position: chr1:70476690-70476536 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 43

Conread position: 464-603
Cow position: chr1:40212282-40212144 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 63

Conread position: 464-616
Cow position: chr1:71321938-71321786 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 464-643
Cow position: chr1:79630854-79630674 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 96

Conread position: 466-603
Cow position: chr1:51626725-51626592 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 466-628
Cow position: chr1:64705963-64706130 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 145

Conread position: 467-602
Cow position: chr1:8133988-8134128 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 43

Conread position: 467-603
Cow position: chr1:2715087-2715222 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 470-628
Cow position: chr1:45233059-45233212 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 475-609
Cow position: chr1:34952316-34952448 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 479-601
Cow position: chr1:8778258-8778136 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.