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Cow genome map

           
Conread name:
           
Spl1-SPL010026C06
        

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:26937292-26937687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 229
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:33793273-33793820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 240
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:31003204-31002925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 131
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr18:4624857-4624512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
2-603
               

               
Cow position:
               
chr18:12241847-12242442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
2-614
               

               
Cow position:
               
chr18:44262191-44262798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr18:45478508-45478772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
12-334
               

               
Cow position:
               
chr18:50927315-50927637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 199
               

               
Conread position:
               
14-285
               

               
Cow position:
               
chr18:17944444-17944718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 161
               

               
Conread position:
               
14-370
               

               
Cow position:
               
chr18:36445012-36445374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
14-371
               

               
Cow position:
               
chr18:56362018-56361665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
17-614
               

               
Cow position:
               
chr18:23447493-23446885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
20-614
               

               
Cow position:
               
chr18:28794477-28793903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
22-603
               

               
Cow position:
               
chr18:45904301-45903731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
23-603
               

               
Cow position:
               
chr18:21195748-21195182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 258
               

               
Conread position:
               
23-611
               

               
Cow position:
               
chr18:19645769-19646330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 102
               

               
Conread position:
               
24-285
               

               
Cow position:
               
chr18:4323143-4323409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
24-602
               

               
Cow position:
               
chr18:3209315-3209883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 15
               

               
Conread position:
               
25-171
               

               
Cow position:
               
chr18:42223927-42224074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
25-177
               

               
Cow position:
               
chr18:47777700-47777855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
25-287
               

               
Cow position:
               
chr18:6046894-6046624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 191
               

               
Conread position:
               
25-324
               

               
Cow position:
               
chr18:15172638-15172921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
25-335
               

               
Cow position:
               
chr18:81356-81656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
25-354
               

               
Cow position:
               
chr18:9007741-9008059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
25-354
               

               
Cow position:
               
chr18:19362685-19362366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
25-360
               

               
Cow position:
               
chr18:33756486-33756801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
25-371
               

               
Cow position:
               
chr18:16045406-16045066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr18:13293102-13293457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr18:20999021-20998677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 131
               

               
Conread position:
               
25-405
               

               
Cow position:
               
chr18:4315892-4316276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 210
               

               
Conread position:
               
25-413
               

               
Cow position:
               
chr18:42966431-42966838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 372
               

               
Conread position:
               
25-422
               

               
Cow position:
               
chr18:34621771-34621379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 148
               

               
Conread position:
               
25-429
               

               
Cow position:
               
chr18:24021984-24022376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 91
               

               
Conread position:
               
25-429
               

               
Cow position:
               
chr18:52632825-52632419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 277
               

               
Conread position:
               
25-435
               

               
Cow position:
               
chr18:22092382-22092765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
25-437
               

               
Cow position:
               
chr18:30248535-30248140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
25-447
               

               
Cow position:
               
chr18:35636754-35636340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
25-465
               

               
Cow position:
               
chr18:6103509-6103073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
25-485
               

               
Cow position:
               
chr18:14815742-14815304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 216
               

               
Conread position:
               
25-497
               

               
Cow position:
               
chr18:50851734-50851278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 165
               

               
Conread position:
               
25-503
               

               
Cow position:
               
chr18:18639969-18640445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 73
               

               
Conread position:
               
25-520
               

               
Cow position:
               
chr18:4540279-4539803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 140
               

               
Conread position:
               
25-531
               

               
Cow position:
               
chr18:10656040-10656529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 86
               

               
Conread position:
               
25-531
               

               
Cow position:
               
chr18:38686695-38687170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 31
               

               
Conread position:
               
25-541
               

               
Cow position:
               
chr18:55139199-55138702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
191, 92
               

               
Conread position:
               
25-542
               

               
Cow position:
               
chr18:33507012-33506510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
25-557
               

               
Cow position:
               
chr18:11376964-11377478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 91
               

               
Conread position:
               
25-577
               

               
Cow position:
               
chr18:28101219-28101769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 259
               

               
Conread position:
               
25-587
               

               
Cow position:
               
chr18:7950706-7951268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 262
               

               
Conread position:
               
25-587
               

               
Cow position:
               
chr18:28658315-28657766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
25-588
               

               
Cow position:
               
chr18:39002202-39001664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 185
               

               
Conread position:
               
25-594
               

               
Cow position:
               
chr18:16044556-16043994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 41
               

               
Conread position:
               
25-598
               

               
Cow position:
               
chr18:42747180-42747759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
25-599
               

               
Cow position:
               
chr18:7964824-7965393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 249
               

               
Conread position:
               
25-600
               

               
Cow position:
               
chr18:3416766-3417328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 147
               

               
Conread position:
               
25-600
               

               
Cow position:
               
chr18:7951802-7952372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 21
               

               
Conread position:
               
25-601
               

               
Cow position:
               
chr18:9029219-9029776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
25-601
               

               
Cow position:
               
chr18:51756693-51757257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
25-601
               

               
Cow position:
               
chr18:55552558-55553136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 270
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr18:9010325-9010870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 146
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr18:11779259-11779815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr18:19193752-19193206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
468, 101
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr18:20864579-20865152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
25-606
               

               
Cow position:
               
chr18:31672908-31672350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
25-607
               

               
Cow position:
               
chr18:19850152-19849602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
25-609
               

               
Cow position:
               
chr18:47183692-47183142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 260
               

               
Conread position:
               
25-611
               

               
Cow position:
               
chr18:37002228-37002810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
25-614
               

               
Cow position:
               
chr18:55119467-55120043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 265
               

               
Conread position:
               
25-634
               

               
Cow position:
               
chr18:51406298-51405725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
26-251
               

               
Cow position:
               
chr18:51191158-51190935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr18:24491478-24491243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 83
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr18:52899661-52899908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
26-295
               

               
Cow position:
               
chr18:11262557-11262823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
26-349
               

               
Cow position:
               
chr18:49161862-49161529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
26-352
               

               
Cow position:
               
chr18:27388148-27388470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
26-353
               

               
Cow position:
               
chr18:7930546-7930222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
26-358
               

               
Cow position:
               
chr18:5646837-5647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
26-362
               

               
Cow position:
               
chr18:6290379-6290713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
26-363
               

               
Cow position:
               
chr18:49655310-49655628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
26-369
               

               
Cow position:
               
chr18:35057944-35058273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 14
               

               
Conread position:
               
26-370
               

               
Cow position:
               
chr18:3098719-3098383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
26-370
               

               
Cow position:
               
chr18:19159369-19159037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
26-385
               

               
Cow position:
               
chr18:54031305-54031651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr18:29387827-29388170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
26-388
               

               
Cow position:
               
chr18:24342220-24342571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
26-413
               

               
Cow position:
               
chr18:35075980-35076365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
26-429
               

               
Cow position:
               
chr18:33606225-33606619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
26-429
               

               
Cow position:
               
chr18:47314704-47314292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 264
               

               
Conread position:
               
26-474
               

               
Cow position:
               
chr18:55462114-55461673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
26-490
               

               
Cow position:
               
chr18:11618076-11618517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
26-492
               

               
Cow position:
               
chr18:55589880-55589441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
26-495
               

               
Cow position:
               
chr18:13508132-13507686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
26-524
               

               
Cow position:
               
chr18:50082639-50082174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
26-530
               

               
Cow position:
               
chr18:36458528-36459020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 229
               

               
Conread position:
               
26-536
               

               
Cow position:
               
chr18:38606830-38607316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 187
               

               
Conread position:
               
26-538
               

               
Cow position:
               
chr18:34527513-34526999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
26-542
               

               
Cow position:
               
chr18:52635487-52634970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
26-554
               

               
Cow position:
               
chr18:17004848-17005368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 90
               

               
Conread position:
               
26-556
               

               
Cow position:
               
chr18:51443834-51443332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 143
               

               
Conread position:
               
26-557
               

               
Cow position:
               
chr18:52693070-52693572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
26-594
               

               
Cow position:
               
chr18:11322183-11322739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 307
               

               
Conread position:
               
26-601
               

               
Cow position:
               
chr18:3180014-3180573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 256
               

               
Conread position:
               
26-601
               

               
Cow position:
               
chr18:46108785-46108220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:5190085-5189526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 143
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:7955741-7956314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:9974731-9974165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:12118251-12117688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 262
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:22121286-22120720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 115
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:26938581-26939137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:37023962-37023372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
26-603
               

               
Cow position:
               
chr18:55782832-55782269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 262
               

               
Conread position:
               
26-608
               

               
Cow position:
               
chr18:27078442-27079036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 189
               

               
Conread position:
               
26-613
               

               
Cow position:
               
chr18:9089300-9089865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr18:11866950-11867515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 52
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr18:29357043-29356453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr18:29648383-29648956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 99
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr18:40758806-40759397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
26-630
               

               
Cow position:
               
chr18:2270909-2270325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
26-630
               

               
Cow position:
               
chr18:43284157-43283568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
500, 133
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr18:37691002-37690755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
27-335
               

               
Cow position:
               
chr18:21721686-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 265
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr18:16418098-16417721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 98
               

               
Conread position:
               
27-435
               

               
Cow position:
               
chr18:36097812-36098206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 99
               

               
Conread position:
               
27-436
               

               
Cow position:
               
chr18:21528001-21528398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
27-512
               

               
Cow position:
               
chr18:35012710-35012245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
27-599
               

               
Cow position:
               
chr18:30360525-30359982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 201
               

               
Conread position:
               
27-600
               

               
Cow position:
               
chr18:9066312-9066862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 193
               

               
Conread position:
               
27-601
               

               
Cow position:
               
chr18:43950434-43950991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 173
               

               
Conread position:
               
27-626
               

               
Cow position:
               
chr18:51691873-51691276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 262
               

               
Conread position:
               
27-631
               

               
Cow position:
               
chr18:3193328-3193902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
27-631
               

               
Cow position:
               
chr18:51713114-51712528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 286
               

               
Conread position:
               
28-249
               

               
Cow position:
               
chr18:21751899-21752121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 143
               

               
Conread position:
               
28-275
               

               
Cow position:
               
chr18:10897256-10897497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
28-349
               

               
Cow position:
               
chr18:56168321-56168005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
28-434
               

               
Cow position:
               
chr18:10861817-10861436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 12
               

               
Conread position:
               
28-599
               

               
Cow position:
               
chr18:3166879-3166349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
28-603
               

               
Cow position:
               
chr18:20641884-20641336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 86
               

               
Conread position:
               
28-608
               

               
Cow position:
               
chr18:22790472-22789920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 10
               

               
Conread position:
               
30-355
               

               
Cow position:
               
chr18:13172927-13172598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 260
               

               
Conread position:
               
30-474
               

               
Cow position:
               
chr18:7946973-7947423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 253
               

               
Conread position:
               
30-615
               

               
Cow position:
               
chr18:28767965-28768538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 140
               

               
Conread position:
               
33-422
               

               
Cow position:
               
chr18:56151053-56150662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
38-562
               

               
Cow position:
               
chr18:29796827-29796304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 216
               

               
Conread position:
               
39-286
               

               
Cow position:
               
chr18:54084935-54084688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
40-422
               

               
Cow position:
               
chr18:2609125-2608744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 248
               

               
Conread position:
               
40-603
               

               
Cow position:
               
chr18:47511602-47512160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 313
               

               
Conread position:
               
40-607
               

               
Cow position:
               
chr18:14586868-14586310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 139
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr18:49543098-49543409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
42-600
               

               
Cow position:
               
chr18:39662387-39662943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 180
               

               
Conread position:
               
43-512
               

               
Cow position:
               
chr18:55396928-55397370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
43-597
               

               
Cow position:
               
chr18:29065763-29065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
45-367
               

               
Cow position:
               
chr18:26286526-26286842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
46-461
               

               
Cow position:
               
chr18:14048326-14048729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 174
               

               
Conread position:
               
46-537
               

               
Cow position:
               
chr18:7359356-7359841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 30
               

               
Conread position:
               
48-361
               

               
Cow position:
               
chr18:16053366-16053060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
49-484
               

               
Cow position:
               
chr18:15881237-15880801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 76
               

               
Conread position:
               
49-600
               

               
Cow position:
               
chr18:3158983-3158421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
49-604
               

               
Cow position:
               
chr18:33299522-33300051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
49-621
               

               
Cow position:
               
chr18:29371484-29372056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
49-626
               

               
Cow position:
               
chr18:55692439-55693003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
49-633
               

               
Cow position:
               
chr18:4926691-4927268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
50-530
               

               
Cow position:
               
chr18:33407240-33407710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
51-464
               

               
Cow position:
               
chr18:11831762-11832143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
52-367
               

               
Cow position:
               
chr18:49665537-49665217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
57-602
               

               
Cow position:
               
chr18:11790557-11791082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
58-371
               

               
Cow position:
               
chr18:41270713-41271024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
58-524
               

               
Cow position:
               
chr18:1585477-1585030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
58-590
               

               
Cow position:
               
chr18:11183568-11184091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
58-600
               

               
Cow position:
               
chr18:6309720-6310242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 63
               

               
Conread position:
               
58-601
               

               
Cow position:
               
chr18:49200273-49200798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
58-628
               

               
Cow position:
               
chr18:12776147-12775591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 179
               

               
Conread position:
               
60-594
               

               
Cow position:
               
chr18:45104819-45104273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
60-601
               

               
Cow position:
               
chr18:20174502-20173974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 195
               

               
Conread position:
               
60-622
               

               
Cow position:
               
chr18:10575740-10576286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
61-333
               

               
Cow position:
               
chr18:54646120-54646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
63-532
               

               
Cow position:
               
chr18:4182555-4182100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
64-320
               

               
Cow position:
               
chr18:45395625-45395891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 207
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr18:2774954-2774675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
66-335
               

               
Cow position:
               
chr18:48407424-48407691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
66-362
               

               
Cow position:
               
chr18:9818474-9818765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 59
               

               
Conread position:
               
67-435
               

               
Cow position:
               
chr18:32121425-32121073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr18:48241581-48241802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
71-334
               

               
Cow position:
               
chr18:54974351-54974089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
71-421
               

               
Cow position:
               
chr18:18562899-18562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
71-518
               

               
Cow position:
               
chr18:4666569-4666140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
72-280
               

               
Cow position:
               
chr18:9846793-9846587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr18:46881043-46880790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
76-289
               

               
Cow position:
               
chr18:39739933-39740136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr18:18627682-18627390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 217
               

               
Conread position:
               
84-264
               

               
Cow position:
               
chr18:56191552-56191371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
84-320
               

               
Cow position:
               
chr18:11811629-11811861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
87-508
               

               
Cow position:
               
chr18:56165638-56166049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 202
               

               
Conread position:
               
88-524
               

               
Cow position:
               
chr18:56172364-56171931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 198
               

               
Conread position:
               
89-334
               

               
Cow position:
               
chr18:14480136-14480373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
89-524
               

               
Cow position:
               
chr18:19619607-19620024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
91-513
               

               
Cow position:
               
chr18:44802224-44801817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
92-428
               

               
Cow position:
               
chr18:8105283-8104955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
94-614
               

               
Cow position:
               
chr18:49100707-49100206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
97-467
               

               
Cow position:
               
chr18:43065177-43065556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
101-415
               

               
Cow position:
               
chr18:52382366-52382678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
102-360
               

               
Cow position:
               
chr18:11233101-11233358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 180
               

               
Conread position:
               
103-600
               

               
Cow position:
               
chr18:9365583-9366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 184
               

               
Conread position:
               
104-602
               

               
Cow position:
               
chr18:4884842-4884355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
104-603
               

               
Cow position:
               
chr18:29958474-29958016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
105-365
               

               
Cow position:
               
chr18:238671-238413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
105-623
               

               
Cow position:
               
chr18:56181782-56181270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
107-536
               

               
Cow position:
               
chr18:19273424-19273001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
107-628
               

               
Cow position:
               
chr18:52637859-52637337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 194
               

               
Conread position:
               
111-513
               

               
Cow position:
               
chr18:11684673-11685054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
112-437
               

               
Cow position:
               
chr18:44549224-44548916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
113-507
               

               
Cow position:
               
chr18:4380976-4381359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
113-514
               

               
Cow position:
               
chr18:21103076-21102703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
114-601
               

               
Cow position:
               
chr18:6275498-6275972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 181
               

               
Conread position:
               
114-606
               

               
Cow position:
               
chr18:3133060-3132605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
116-320
               

               
Cow position:
               
chr18:1733507-1733308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
117-300
               

               
Cow position:
               
chr18:5742750-5742567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
117-367
               

               
Cow position:
               
chr18:47872795-47873022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
245, 15
               

               
Conread position:
               
117-592
               

               
Cow position:
               
chr18:26998550-26999043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 272
               

               
Conread position:
               
119-490
               

               
Cow position:
               
chr18:15025365-15025721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
119-600
               

               
Cow position:
               
chr18:42431915-42431452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
120-601
               

               
Cow position:
               
chr18:3115148-3115619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
122-370
               

               
Cow position:
               
chr18:26586974-26586722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 176
               

               
Conread position:
               
122-601
               

               
Cow position:
               
chr18:43823262-43822790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 172
               

               
Conread position:
               
122-607
               

               
Cow position:
               
chr18:26355331-26354872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
125-371
               

               
Cow position:
               
chr18:18958097-18957859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
125-614
               

               
Cow position:
               
chr18:4955175-4955638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
308, 44
               

               
Conread position:
               
125-624
               

               
Cow position:
               
chr18:50566567-50567090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
127-652
               

               
Cow position:
               
chr18:4625596-4626105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
128-435
               

               
Cow position:
               
chr18:4858212-4857899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
129-521
               

               
Cow position:
               
chr18:16726345-16726728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
130-328
               

               
Cow position:
               
chr18:3422419-3422614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
130-360
               

               
Cow position:
               
chr18:47931161-47930940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
130-601
               

               
Cow position:
               
chr18:54572597-54572125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
131-310
               

               
Cow position:
               
chr18:11694979-11695153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr18:4649035-4648808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr18:23808173-23807937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
131-386
               

               
Cow position:
               
chr18:47868155-47868412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
109, 166
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr18:11166679-11166961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
131-428
               

               
Cow position:
               
chr18:11680420-11680711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 149
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr18:20127402-20127054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
198, 38
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr18:51211882-51212237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
131-531
               

               
Cow position:
               
chr18:33157521-33157905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
131-539
               

               
Cow position:
               
chr18:25647549-25647149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 38
               

               
Conread position:
               
131-598
               

               
Cow position:
               
chr18:5766129-5766569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 97
               

               
Conread position:
               
131-600
               

               
Cow position:
               
chr18:46048465-46048916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 24
               

               
Conread position:
               
131-610
               

               
Cow position:
               
chr18:20271320-20270838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 150
               

               
Conread position:
               
131-617
               

               
Cow position:
               
chr18:30341463-30341002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
131-627
               

               
Cow position:
               
chr18:39115444-39114932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 156
               

               
Conread position:
               
132-421
               

               
Cow position:
               
chr18:52658120-52658392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
132-489
               

               
Cow position:
               
chr18:25206491-25206140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 152
               

               
Conread position:
               
132-535
               

               
Cow position:
               
chr18:39875559-39875166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
132-599
               

               
Cow position:
               
chr18:19143815-19143343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
133-614
               

               
Cow position:
               
chr18:12113665-12113192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 68
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chr18:21067643-21067816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
134-346
               

               
Cow position:
               
chr18:50700368-50700582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
134-370
               

               
Cow position:
               
chr18:45572812-45573043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr18:23424631-23424865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
134-497
               

               
Cow position:
               
chr18:13359765-13360110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
134-539
               

               
Cow position:
               
chr18:22214189-22214586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
134-598
               

               
Cow position:
               
chr18:5578007-5578455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
134-603
               

               
Cow position:
               
chr18:10904549-10905012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
135-422
               

               
Cow position:
               
chr18:48290734-48290459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 145
               

               
Conread position:
               
135-438
               

               
Cow position:
               
chr18:10516852-10517132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
217, 32
               

               
Conread position:
               
135-530
               

               
Cow position:
               
chr18:56159169-56159550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
135-585
               

               
Cow position:
               
chr18:42455316-42454872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 56
               

               
Conread position:
               
135-611
               

               
Cow position:
               
chr18:1144489-1144019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
135-612
               

               
Cow position:
               
chr18:18919249-18918789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
136-360
               

               
Cow position:
               
chr18:17334710-17334487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
136-370
               

               
Cow position:
               
chr18:26335112-26334878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
136-497
               

               
Cow position:
               
chr18:23476965-23476631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
136-524
               

               
Cow position:
               
chr18:6610153-6609768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
136-524
               

               
Cow position:
               
chr18:56183643-56184018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
136-603
               

               
Cow position:
               
chr18:55789287-55788829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 148
               

               
Conread position:
               
136-622
               

               
Cow position:
               
chr18:29080534-29080978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
466, 37
               

               
Conread position:
               
138-379
               

               
Cow position:
               
chr18:21175887-21176131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
138-403
               

               
Cow position:
               
chr18:16847405-16847657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
138-535
               

               
Cow position:
               
chr18:36231004-36230633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
140-348
               

               
Cow position:
               
chr18:4529229-4529423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
140-421
               

               
Cow position:
               
chr18:268102-267835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
140-495
               

               
Cow position:
               
chr18:249094-248761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
140-542
               

               
Cow position:
               
chr18:47517499-47517106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 29
               

               
Conread position:
               
140-568
               

               
Cow position:
               
chr18:5995181-5995601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 54
               

               
Conread position:
               
140-600
               

               
Cow position:
               
chr18:15614135-15613702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 15
               

               
Conread position:
               
140-600
               

               
Cow position:
               
chr18:46453170-46452721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
140-602
               

               
Cow position:
               
chr18:50381966-50382414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
140-603
               

               
Cow position:
               
chr18:36265074-36264616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
140-608
               

               
Cow position:
               
chr18:31725175-31724708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
141-433
               

               
Cow position:
               
chr18:54658011-54658304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
141-521
               

               
Cow position:
               
chr18:31586654-31586295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
141-538
               

               
Cow position:
               
chr18:39434550-39434919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
141-603
               

               
Cow position:
               
chr18:42479870-42479415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
141-611
               

               
Cow position:
               
chr18:38985397-38985867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 141
               

               
Conread position:
               
142-320
               

               
Cow position:
               
chr18:56163298-56163472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
142-363
               

               
Cow position:
               
chr18:51537951-51537734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
142-550
               

               
Cow position:
               
chr18:38344515-38344919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
142-600
               

               
Cow position:
               
chr18:55498777-55499232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
142-603
               

               
Cow position:
               
chr18:10891238-10891676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
143-534
               

               
Cow position:
               
chr18:25282843-25282462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
143-614
               

               
Cow position:
               
chr18:43806163-43806630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 142
               

               
Conread position:
               
144-421
               

               
Cow position:
               
chr18:19831010-19831290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
110, 131
               

               
Conread position:
               
144-539
               

               
Cow position:
               
chr18:21192697-21192317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
144-559
               

               
Cow position:
               
chr18:35537516-35537097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 60
               

               
Conread position:
               
147-252
               

               
Cow position:
               
chr18:50974861-50974756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
147-539
               

               
Cow position:
               
chr18:48453410-48453772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
147-602
               

               
Cow position:
               
chr18:47525122-47525556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 59
               

               
Conread position:
               
148-601
               

               
Cow position:
               
chr18:2592456-2591997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 138
               

               
Conread position:
               
149-334
               

               
Cow position:
               
chr18:18976802-18976988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 145
               

               
Conread position:
               
149-405
               

               
Cow position:
               
chr18:5247801-5247547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 188
               

               
Conread position:
               
149-559
               

               
Cow position:
               
chr18:51656335-51655927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 229
               

               
Conread position:
               
152-352
               

               
Cow position:
               
chr18:21773210-21773414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
152-607
               

               
Cow position:
               
chr18:17956654-17956208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
153-607
               

               
Cow position:
               
chr18:55759759-55759298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
154-531
               

               
Cow position:
               
chr18:30794157-30794516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
154-631
               

               
Cow position:
               
chr18:44137198-44137686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
74, 196
               

               
Conread position:
               
156-544
               

               
Cow position:
               
chr18:5711943-5711549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
158-600
               

               
Cow position:
               
chr18:42432365-42431930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr18:21768355-21768563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
160-601
               

               
Cow position:
               
chr18:4628761-4629208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
161-600
               

               
Cow position:
               
chr18:33158693-33159105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
161-603
               

               
Cow position:
               
chr18:12058747-12059159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
162-601
               

               
Cow position:
               
chr18:7945365-7945803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
21, 211
               

               
Conread position:
               
163-523
               

               
Cow position:
               
chr18:7952378-7952720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
163-599
               

               
Cow position:
               
chr18:4758293-4757872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
163-603
               

               
Cow position:
               
chr18:3044164-3044622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
164-420
               

               
Cow position:
               
chr18:1582542-1582297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
164-590
               

               
Cow position:
               
chr18:37382365-37381939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
165-435
               

               
Cow position:
               
chr18:2480376-2480650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
165-603
               

               
Cow position:
               
chr18:11691678-11691241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
167-371
               

               
Cow position:
               
chr18:28823232-28823031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
167-600
               

               
Cow position:
               
chr18:10322536-10322958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
168-601
               

               
Cow position:
               
chr18:48713292-48713705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
169-421
               

               
Cow position:
               
chr18:35582364-35582117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
171-603
               

               
Cow position:
               
chr18:12023893-12023474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 74
               

               
Conread position:
               
172-348
               

               
Cow position:
               
chr18:56192849-56192678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
172-521
               

               
Cow position:
               
chr18:22411876-22411531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
175-382
               

               
Cow position:
               
chr18:19363676-19363882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
179-625
               

               
Cow position:
               
chr18:17649988-17649552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
186, 72
               

               
Conread position:
               
180-639
               

               
Cow position:
               
chr18:4496139-4495691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
181-435
               

               
Cow position:
               
chr18:21205116-21205358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
183-600
               

               
Cow position:
               
chr18:32883053-32883454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
187-535
               

               
Cow position:
               
chr18:33007812-33008160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
187-611
               

               
Cow position:
               
chr18:3018323-3017921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
187-623
               

               
Cow position:
               
chr18:18592228-18592648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
188-366
               

               
Cow position:
               
chr18:12809616-12809789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
188-502
               

               
Cow position:
               
chr18:40149679-40149976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
275, 8
               

               
Conread position:
               
188-524
               

               
Cow position:
               
chr18:47828586-47828901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
189-428
               

               
Cow position:
               
chr18:24946055-24945818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
189-647
               

               
Cow position:
               
chr18:17391216-17390779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 51
               

               
Conread position:
               
193-625
               

               
Cow position:
               
chr18:56155262-56155703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
194-351
               

               
Cow position:
               
chr18:35908386-35908539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
195-320
               

               
Cow position:
               
chr18:33882894-33882771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
196-485
               

               
Cow position:
               
chr18:25984808-25984527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
197-429
               

               
Cow position:
               
chr18:15340674-15340456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
197-542
               

               
Cow position:
               
chr18:48829021-48828674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
197-544
               

               
Cow position:
               
chr18:43020624-43020301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
197-615
               

               
Cow position:
               
chr18:18962074-18961655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
198-600
               

               
Cow position:
               
chr18:10977444-10977053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
198-601
               

               
Cow position:
               
chr18:33896656-33896251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 55
               

               
Conread position:
               
199-435
               

               
Cow position:
               
chr18:219100-219334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
201-367
               

               
Cow position:
               
chr18:55716078-55715913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
204-405
               

               
Cow position:
               
chr18:53962456-53962656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
205-386
               

               
Cow position:
               
chr18:29188783-29188964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
206-539
               

               
Cow position:
               
chr18:51392871-51392545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
207-623
               

               
Cow position:
               
chr18:16545690-16545277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
208-327
               

               
Cow position:
               
chr18:2619420-2619300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
208-438
               

               
Cow position:
               
chr18:14085238-14085462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
178, 71
               

               
Conread position:
               
208-577
               

               
Cow position:
               
chr18:2864222-2863858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
210-479
               

               
Cow position:
               
chr18:47812247-47812507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
210-601
               

               
Cow position:
               
chr18:3211647-3212043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
211-358
               

               
Cow position:
               
chr18:54056338-54056482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
212-382
               

               
Cow position:
               
chr18:18815892-18815724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
214-513
               

               
Cow position:
               
chr18:18369578-18369290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
214-633
               

               
Cow position:
               
chr18:23715106-23714693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr18:3387336-3387019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
217-603
               

               
Cow position:
               
chr18:1954808-1954415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
218-413
               

               
Cow position:
               
chr18:18868530-18868727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
219-598
               

               
Cow position:
               
chr18:7415242-7414874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
222-497
               

               
Cow position:
               
chr18:36184114-36183850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
223-608
               

               
Cow position:
               
chr18:39623590-39623974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 71
               

               
Conread position:
               
226-614
               

               
Cow position:
               
chr18:23616086-23615698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
194, 56
               

               
Conread position:
               
226-617
               

               
Cow position:
               
chr18:7108920-7109315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
228-614
               

               
Cow position:
               
chr18:3164725-3164337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
229-603
               

               
Cow position:
               
chr18:1399554-1399187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
174, 53
               

               
Conread position:
               
231-566
               

               
Cow position:
               
chr18:858609-858953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 151
               

               
Conread position:
               
234-603
               

               
Cow position:
               
chr18:5072608-5072252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
234-607
               

               
Cow position:
               
chr18:16313188-16313546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
235-567
               

               
Cow position:
               
chr18:27109493-27109162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
293, 44
               

               
Conread position:
               
235-601
               

               
Cow position:
               
chr18:52704049-52703697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
239-629
               

               
Cow position:
               
chr18:12273461-12273841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
241-437
               

               
Cow position:
               
chr18:27637020-27637208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
241-521
               

               
Cow position:
               
chr18:8299823-8300096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
241-542
               

               
Cow position:
               
chr18:19896646-19896350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
241-566
               

               
Cow position:
               
chr18:48451862-48452193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 145
               

               
Conread position:
               
241-627
               

               
Cow position:
               
chr18:52472307-52472696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
242-430
               

               
Cow position:
               
chr18:3708832-3709025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
242-549
               

               
Cow position:
               
chr18:36746444-36746151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
242-599
               

               
Cow position:
               
chr18:46276498-46276138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
243-512
               

               
Cow position:
               
chr18:16686525-16686263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
244-539
               

               
Cow position:
               
chr18:47835639-47835922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
208, 38
               

               
Conread position:
               
244-607
               

               
Cow position:
               
chr18:346689-346325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
251-529
               

               
Cow position:
               
chr18:52477970-52478238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
255-521
               

               
Cow position:
               
chr18:56191148-56190882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
256-424
               

               
Cow position:
               
chr18:7970192-7970355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
256-533
               

               
Cow position:
               
chr18:21740985-21740724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
256-580
               

               
Cow position:
               
chr18:4330779-4331094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
256-615
               

               
Cow position:
               
chr18:43555700-43555336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 23
               

               
Conread position:
               
259-556
               

               
Cow position:
               
chr18:33504432-33504140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
259-576
               

               
Cow position:
               
chr18:23821989-23821691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
282, 23
               

               
Conread position:
               
259-628
               

               
Cow position:
               
chr18:50974468-50974097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
227, 34
               

               
Conread position:
               
259-630
               

               
Cow position:
               
chr18:51676268-51675893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr18:30586390-30586076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
261-600
               

               
Cow position:
               
chr18:52684778-52684440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
265-532
               

               
Cow position:
               
chr18:51850728-51850473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
273-590
               

               
Cow position:
               
chr18:35873916-35874230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 10
               

               
Conread position:
               
273-602
               

               
Cow position:
               
chr18:51643528-51643205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
274-575
               

               
Cow position:
               
chr18:2151422-2151706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
279-598
               

               
Cow position:
               
chr18:3085673-3085347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
279-603
               

               
Cow position:
               
chr18:4556323-4555999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
279-614
               

               
Cow position:
               
chr18:55747529-55747865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
282-523
               

               
Cow position:
               
chr18:55806785-55806552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
282-603
               

               
Cow position:
               
chr18:8171239-8170926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
283-539
               

               
Cow position:
               
chr18:10897881-10898130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
140, 78
               

               
Conread position:
               
283-542
               

               
Cow position:
               
chr18:16997100-16997355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
283-589
               

               
Cow position:
               
chr18:30405815-30405507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
232, 73
               

               
Conread position:
               
283-593
               

               
Cow position:
               
chr18:24266562-24266248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 77
               

               
Conread position:
               
283-593
               

               
Cow position:
               
chr18:36768957-36768661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
191, 81
               

               
Conread position:
               
283-601
               

               
Cow position:
               
chr18:35663744-35664057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
248, 26
               

               
Conread position:
               
283-608
               

               
Cow position:
               
chr18:5632113-5632434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
283-630
               

               
Cow position:
               
chr18:30225694-30225337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
283-644
               

               
Cow position:
               
chr18:380780-381126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
284-629
               

               
Cow position:
               
chr18:6005646-6005308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
285-512
               

               
Cow position:
               
chr18:3370748-3370971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
285-537
               

               
Cow position:
               
chr18:52854900-52855152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
95, 106
               

               
Conread position:
               
285-613
               

               
Cow position:
               
chr18:20462844-20462532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
285-614
               

               
Cow position:
               
chr18:50095544-50095230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
233, 51
               

               
Conread position:
               
285-628
               

               
Cow position:
               
chr18:1571387-1571046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 84
               

               
Conread position:
               
286-600
               

               
Cow position:
               
chr18:24508389-24508071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
286-603
               

               
Cow position:
               
chr18:29474591-29474903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
286-614
               

               
Cow position:
               
chr18:31711719-31711400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
286-615
               

               
Cow position:
               
chr18:19640831-19641151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
286-625
               

               
Cow position:
               
chr18:25601466-25601137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
169, 53
               

               
Conread position:
               
287-603
               

               
Cow position:
               
chr18:727889-728186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
289-542
               

               
Cow position:
               
chr18:19883385-19883634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
166, 8
               

               
Conread position:
               
289-603
               

               
Cow position:
               
chr18:54130480-54130177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
164, 86
               

               
Conread position:
               
290-497
               

               
Cow position:
               
chr18:22274981-22274785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
290-608
               

               
Cow position:
               
chr18:51644168-51643845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
290-614
               

               
Cow position:
               
chr18:49038316-49038630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
290-615
               

               
Cow position:
               
chr18:4264536-4264218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
291-614
               

               
Cow position:
               
chr18:49841134-49841461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
291-625
               

               
Cow position:
               
chr18:34813505-34813840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
291-628
               

               
Cow position:
               
chr18:55140703-55140366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
292-607
               

               
Cow position:
               
chr18:2146730-2146423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
292-625
               

               
Cow position:
               
chr18:23623776-23623443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
221, 80
               

               
Conread position:
               
293-603
               

               
Cow position:
               
chr18:10214338-10214026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
293-614
               

               
Cow position:
               
chr18:11907053-11907377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
293-630
               

               
Cow position:
               
chr18:42290465-42290141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
311, 30
               

               
Conread position:
               
293-630
               

               
Cow position:
               
chr18:42293193-42292869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
306, 30
               

               
Conread position:
               
294-572
               

               
Cow position:
               
chr18:2774274-2774002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
238, 19
               

               
Conread position:
               
294-633
               

               
Cow position:
               
chr18:19687879-19688221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
214, 93
               

               
Conread position:
               
297-603
               

               
Cow position:
               
chr18:22056018-22055695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
299-600
               

               
Cow position:
               
chr18:25598376-25598071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
299-614
               

               
Cow position:
               
chr18:42988449-42988129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
301-616
               

               
Cow position:
               
chr18:37303010-37303335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
302-601
               

               
Cow position:
               
chr18:55549595-55549895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
213, 67
               

               
Conread position:
               
304-531
               

               
Cow position:
               
chr18:47967055-47966838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
305-606
               

               
Cow position:
               
chr18:53642881-53642581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
305-632
               

               
Cow position:
               
chr18:53053371-53053034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
306-603
               

               
Cow position:
               
chr18:23630730-23630450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
307-581
               

               
Cow position:
               
chr18:34834362-34834639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
307-614
               

               
Cow position:
               
chr18:4490024-4489723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
307-614
               

               
Cow position:
               
chr18:10051603-10051922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
311-594
               

               
Cow position:
               
chr18:41854714-41854433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
230, 52
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr18:25282016-25281743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
312-606
               

               
Cow position:
               
chr18:23162769-23163062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
209, 60
               

               
Conread position:
               
314-599
               

               
Cow position:
               
chr18:15517298-15517013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
139, 135
               

               
Conread position:
               
315-603
               

               
Cow position:
               
chr18:50959365-50959654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
317-585
               

               
Cow position:
               
chr18:24759774-24759512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
317-614
               

               
Cow position:
               
chr18:20481071-20480765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
318-633
               

               
Cow position:
               
chr18:12584961-12584651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
320-614
               

               
Cow position:
               
chr18:1931569-1931283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
213, 7
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr18:23169463-23169770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
326-599
               

               
Cow position:
               
chr18:43797063-43796798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
326-642
               

               
Cow position:
               
chr18:42212335-42212647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
189, 35
               

               
Conread position:
               
328-579
               

               
Cow position:
               
chr18:20175299-20175053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
213, 28
               

               
Conread position:
               
328-622
               

               
Cow position:
               
chr18:47485945-47486232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
210, 46
               

               
Conread position:
               
330-535
               

               
Cow position:
               
chr18:5078881-5078680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
330-608
               

               
Cow position:
               
chr18:35535258-35534981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
330-614
               

               
Cow position:
               
chr18:28930745-28930466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
160, 54
               

               
Conread position:
               
332-632
               

               
Cow position:
               
chr18:22180888-22180588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
335-628
               

               
Cow position:
               
chr18:53795381-53795671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
336-595
               

               
Cow position:
               
chr18:47416894-47417157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
336-614
               

               
Cow position:
               
chr18:10065628-10065342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
339-564
               

               
Cow position:
               
chr18:48961837-48962065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
339-615
               

               
Cow position:
               
chr18:22569164-22568889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
183, 24
               

               
Conread position:
               
342-614
               

               
Cow position:
               
chr18:32189605-32189341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
342-615
               

               
Cow position:
               
chr18:49015032-49015292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
343-628
               

               
Cow position:
               
chr18:16812058-16812342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
345-614
               

               
Cow position:
               
chr18:21782602-21782861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
346-535
               

               
Cow position:
               
chr18:4624237-4624056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
346-609
               

               
Cow position:
               
chr18:36449806-36450073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
346-632
               

               
Cow position:
               
chr18:19868353-19868066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
359-628
               

               
Cow position:
               
chr18:5600556-5600827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 30
               

               
Conread position:
               
360-601
               

               
Cow position:
               
chr18:52251939-52251691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
361-592
               

               
Cow position:
               
chr18:22516611-22516382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
171, 8
               

               
Conread position:
               
361-603
               

               
Cow position:
               
chr18:5647736-5647973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
370-614
               

               
Cow position:
               
chr18:38211090-38211336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
171, 73
               

               
Conread position:
               
374-614
               

               
Cow position:
               
chr18:52649412-52649161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
374-632
               

               
Cow position:
               
chr18:18843948-18844203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
375-600
               

               
Cow position:
               
chr18:37189358-37189130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
375-603
               

               
Cow position:
               
chr18:38937758-38937985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
376-572
               

               
Cow position:
               
chr18:52413902-52414108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
376-600
               

               
Cow position:
               
chr18:9040773-9040542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
376-601
               

               
Cow position:
               
chr18:45622867-45622639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
377-603
               

               
Cow position:
               
chr18:47824830-47824609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
377-603
               

               
Cow position:
               
chr18:51383457-51383233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
377-604
               

               
Cow position:
               
chr18:47548050-47547816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 127
               

               
Conread position:
               
377-607
               

               
Cow position:
               
chr18:24719251-24719479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
215, 9
               

               
Conread position:
               
377-622
               

               
Cow position:
               
chr18:44908991-44909237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
378-615
               

               
Cow position:
               
chr18:15809863-15809634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
379-602
               

               
Cow position:
               
chr18:8949855-8949635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
147, 8
               

               
Conread position:
               
379-608
               

               
Cow position:
               
chr18:48113024-48112795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
387-613
               

               
Cow position:
               
chr18:40063036-40063270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
388-603
               

               
Cow position:
               
chr18:2773445-2773222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
388-603
               

               
Cow position:
               
chr18:2776948-2776725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
388-606
               

               
Cow position:
               
chr18:46880222-46879992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
389-600
               

               
Cow position:
               
chr18:31082400-31082181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 116
               

               
Conread position:
               
389-603
               

               
Cow position:
               
chr18:44917705-44917919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 162
               

               
Conread position:
               
390-603
               

               
Cow position:
               
chr18:19765138-19765351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
390-639
               

               
Cow position:
               
chr18:35367243-35367005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
391-595
               

               
Cow position:
               
chr18:7963731-7963935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
134, 106
               

               
Conread position:
               
391-600
               

               
Cow position:
               
chr18:51192790-51192586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
391-603
               

               
Cow position:
               
chr18:11233366-11233586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
391-604
               

               
Cow position:
               
chr18:25757361-25757148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
391-614
               

               
Cow position:
               
chr18:50359283-50359501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
391-615
               

               
Cow position:
               
chr18:135704-135481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
211, 84
               

               
Conread position:
               
391-615
               

               
Cow position:
               
chr18:14172257-14172036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
391-615
               

               
Cow position:
               
chr18:16659482-16659250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
392-603
               

               
Cow position:
               
chr18:50632491-50632280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
148, 119
               

               
Conread position:
               
392-626
               

               
Cow position:
               
chr18:19796972-19796730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
393-622
               

               
Cow position:
               
chr18:32253557-32253322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
393-627
               

               
Cow position:
               
chr18:32600004-32600242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 185
               

               
Conread position:
               
395-603
               

               
Cow position:
               
chr18:14225348-14225553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
395-626
               

               
Cow position:
               
chr18:21969849-21969616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
396-600
               

               
Cow position:
               
chr18:39168487-39168692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
148, 60
               

               
Conread position:
               
396-606
               

               
Cow position:
               
chr18:45558102-45558311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
396-614
               

               
Cow position:
               
chr18:6470050-6470267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
396-617
               

               
Cow position:
               
chr18:42427575-42427795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
398-601
               

               
Cow position:
               
chr18:11657614-11657822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
133, 59
               

               
Conread position:
               
398-601
               

               
Cow position:
               
chr18:53093061-53092851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
133, 193
               

               
Conread position:
               
399-628
               

               
Cow position:
               
chr18:23648880-23649114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 210
               

               
Conread position:
               
399-628
               

               
Cow position:
               
chr18:46880747-46880513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
400-593
               

               
Cow position:
               
chr18:40047539-40047349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
400-614
               

               
Cow position:
               
chr18:37188038-37187817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
401-603
               

               
Cow position:
               
chr18:35827413-35827213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
401-607
               

               
Cow position:
               
chr18:23941663-23941447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
403-616
               

               
Cow position:
               
chr18:26873387-26873594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
405-603
               

               
Cow position:
               
chr18:35786020-35786218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
407-603
               

               
Cow position:
               
chr18:49603078-49602877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr18:39460186-39460386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
195, 170
               

               
Conread position:
               
409-615
               

               
Cow position:
               
chr18:48407707-48407912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 96
               

               
Conread position:
               
409-616
               

               
Cow position:
               
chr18:47802122-47801917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
194, 34
               

               
Conread position:
               
410-600
               

               
Cow position:
               
chr18:19809713-19809521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 95
               

               
Conread position:
               
410-601
               

               
Cow position:
               
chr18:34490249-34490444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
410-607
               

               
Cow position:
               
chr18:23810151-23809952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
410-614
               

               
Cow position:
               
chr18:49970684-49970474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 169
               

               
Conread position:
               
410-626
               

               
Cow position:
               
chr18:18664404-18664178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
410-643
               

               
Cow position:
               
chr18:31159304-31159064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
411-611
               

               
Cow position:
               
chr18:35795252-35795048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
415-603
               

               
Cow position:
               
chr18:11434727-11434917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
415-631
               

               
Cow position:
               
chr18:4718233-4718453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 172
               

               
Conread position:
               
416-615
               

               
Cow position:
               
chr18:697242-697044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
416-634
               

               
Cow position:
               
chr18:2108222-2108441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
417-606
               

               
Cow position:
               
chr18:31969-32159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
418-609
               

               
Cow position:
               
chr18:24022595-24022783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
419-589
               

               
Cow position:
               
chr18:43125064-43125228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
419-603
               

               
Cow position:
               
chr18:50004724-50004541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
419-616
               

               
Cow position:
               
chr18:28322635-28322829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
422-599
               

               
Cow position:
               
chr18:55722482-55722661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
423-614
               

               
Cow position:
               
chr18:21187288-21187478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
425-601
               

               
Cow position:
               
chr18:16381842-16382024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
426-601
               

               
Cow position:
               
chr18:17195360-17195183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
427-601
               

               
Cow position:
               
chr18:27637478-27637655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 140
               

               
Conread position:
               
433-614
               

               
Cow position:
               
chr18:21724177-21723990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
434-591
               

               
Cow position:
               
chr18:306726-306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
446-603
               

               
Cow position:
               
chr18:49440846-49441008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
448-600
               

               
Cow position:
               
chr18:19229924-19230084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
449-608
               

               
Cow position:
               
chr18:30786749-30786900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
450-572
               

               
Cow position:
               
chr18:47920755-47920883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
450-590
               

               
Cow position:
               
chr18:47306898-47306752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
450-593
               

               
Cow position:
               
chr18:41253549-41253698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 129
               

               
Conread position:
               
450-598
               

               
Cow position:
               
chr18:3066353-3066496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
450-599
               

               
Cow position:
               
chr18:36501069-36500921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
450-600
               

               
Cow position:
               
chr18:56463721-56463566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
450-601
               

               
Cow position:
               
chr18:23898427-23898575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
450-603
               

               
Cow position:
               
chr18:2576691-2576528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
450-603
               

               
Cow position:
               
chr18:9818777-9818928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
450-603
               

               
Cow position:
               
chr18:21528656-21528815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
450-606
               

               
Cow position:
               
chr18:8208416-8208255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
450-607
               

               
Cow position:
               
chr18:36098375-36098527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
450-609
               

               
Cow position:
               
chr18:51655169-51655012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
450-612
               

               
Cow position:
               
chr18:238107-237939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
450-614
               

               
Cow position:
               
chr18:4485608-4485771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
450-614
               

               
Cow position:
               
chr18:51395876-51395718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
450-615
               

               
Cow position:
               
chr18:3709239-3709407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
450-625
               

               
Cow position:
               
chr18:21051074-21050902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
450-626
               

               
Cow position:
               
chr18:21751387-21751568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
450-628
               

               
Cow position:
               
chr18:44514095-44514279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 158
               

               
Conread position:
               
450-630
               

               
Cow position:
               
chr18:4000355-4000540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
450-630
               

               
Cow position:
               
chr18:8975405-8975583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
450-630
               

               
Cow position:
               
chr18:22045404-22045219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
450-633
               

               
Cow position:
               
chr18:24946096-24946280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
450-637
               

               
Cow position:
               
chr18:47175372-47175183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
451-585
               

               
Cow position:
               
chr18:31727634-31727498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
451-592
               

               
Cow position:
               
chr18:41639149-41639005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
451-594
               

               
Cow position:
               
chr18:19143962-19143814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
451-607
               

               
Cow position:
               
chr18:2144581-2144739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
451-607
               

               
Cow position:
               
chr18:45573390-45573550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
451-614
               

               
Cow position:
               
chr18:23380141-23380304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
451-614
               

               
Cow position:
               
chr18:39710117-39710291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
451-627
               

               
Cow position:
               
chr18:1662575-1662391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
451-627
               

               
Cow position:
               
chr18:8220165-8219985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 159
               

               
Conread position:
               
451-630
               

               
Cow position:
               
chr18:31557150-31556965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 157
               

               
Conread position:
               
451-630
               

               
Cow position:
               
chr18:32992393-32992571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
451-644
               

               
Cow position:
               
chr18:52387210-52387013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 159
               

               
Conread position:
               
452-600
               

               
Cow position:
               
chr18:4851472-4851323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
452-600
               

               
Cow position:
               
chr18:35857913-35857762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr18:11856912-11857061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr18:17974641-17974789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr18:34444725-34444572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr18:50276232-50276077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
452-608
               

               
Cow position:
               
chr18:9596194-9596347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
452-609
               

               
Cow position:
               
chr18:47096440-47096592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
452-614
               

               
Cow position:
               
chr18:47419810-47419969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
452-626
               

               
Cow position:
               
chr18:44206073-44205906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
452-628
               

               
Cow position:
               
chr18:41702845-41703025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
453-593
               

               
Cow position:
               
chr18:44548734-44548591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
453-624
               

               
Cow position:
               
chr18:34389371-34389196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
454-596
               

               
Cow position:
               
chr18:43014854-43014712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
456-597
               

               
Cow position:
               
chr18:47680529-47680669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
456-597
               

               
Cow position:
               
chr18:47865086-47865226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
456-603
               

               
Cow position:
               
chr18:45897746-45897892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
456-607
               

               
Cow position:
               
chr18:21562911-21562754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
456-607
               

               
Cow position:
               
chr18:53954359-53954518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
456-611
               

               
Cow position:
               
chr18:33757032-33757186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
456-614
               

               
Cow position:
               
chr18:10758040-10757882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
456-614
               

               
Cow position:
               
chr18:35171363-35171526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
456-617
               

               
Cow position:
               
chr18:17007465-17007305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
456-641
               

               
Cow position:
               
chr18:4907162-4907343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
457-601
               

               
Cow position:
               
chr18:21143947-21143805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
457-634
               

               
Cow position:
               
chr18:2793955-2793776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
457-636
               

               
Cow position:
               
chr18:48092901-48092716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 180
               

               
Conread position:
               
458-600
               

               
Cow position:
               
chr18:47868622-47868758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
458-605
               

               
Cow position:
               
chr18:48000809-48000661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
458-628
               

               
Cow position:
               
chr18:37690167-37690341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
459-601
               

               
Cow position:
               
chr18:4857706-4857559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
459-615
               

               
Cow position:
               
chr18:10117758-10117916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
459-624
               

               
Cow position:
               
chr18:33364230-33364396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
460-605
               

               
Cow position:
               
chr18:42967131-42967271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
462-611
               

               
Cow position:
               
chr18:35236002-35235848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
464-639
               

               
Cow position:
               
chr18:7487255-7487433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
468-614
               

               
Cow position:
               
chr18:36296715-36296572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
470-625
               

               
Cow position:
               
chr18:48290198-48290051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
472-603
               

               
Cow position:
               
chr18:18520770-18520636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
479-603
               

               
Cow position:
               
chr18:641275-641150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
484-615
               

               
Cow position:
               
chr18:1151902-1151768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
490-631
               

               
Cow position:
               
chr18:30295557-30295414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 57
               
Show alignments to all cow chromosomes.