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Cow genome map

           
Conread name:
           
Spl1-SPL010026C06
        

               
Conread position:
               
1-330
               

               
Cow position:
               
chr20:3891694-3892012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr20:10062071-10061813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr20:32667630-32667931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr20:23164227-23163904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 276
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr20:14831974-14831614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr20:15068794-15069188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
14-354
               

               
Cow position:
               
chr20:11614388-11614048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 274
               

               
Conread position:
               
14-592
               

               
Cow position:
               
chr20:7806907-7806336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 283
               

               
Conread position:
               
14-607
               

               
Cow position:
               
chr20:20353257-20352664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 171
               

               
Conread position:
               
15-602
               

               
Cow position:
               
chr20:31740554-31739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
469, 110
               

               
Conread position:
               
17-382
               

               
Cow position:
               
chr20:15577231-15576865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 292
               

               
Conread position:
               
21-601
               

               
Cow position:
               
chr20:12996345-12995754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 241
               

               
Conread position:
               
22-535
               

               
Cow position:
               
chr20:9412161-9412658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 152
               

               
Conread position:
               
24-481
               

               
Cow position:
               
chr20:22313493-22313044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 186
               

               
Conread position:
               
24-495
               

               
Cow position:
               
chr20:28955999-28955571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
429, 65
               

               
Conread position:
               
24-590
               

               
Cow position:
               
chr20:7549925-7550462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 95
               

               
Conread position:
               
25-192
               

               
Cow position:
               
chr20:34240000-34240165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr20:19340401-19340197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr20:24440100-24440330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr20:9340461-9340705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
25-273
               

               
Cow position:
               
chr20:30482567-30482323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
154, 95
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr20:32866678-32866418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr20:12839726-12839993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
25-354
               

               
Cow position:
               
chr20:39700774-39701100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 258
               

               
Conread position:
               
25-359
               

               
Cow position:
               
chr20:12442022-12441686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
25-360
               

               
Cow position:
               
chr20:13048749-13048413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
215, 299
               

               
Conread position:
               
25-360
               

               
Cow position:
               
chr20:17734103-17733774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
25-371
               

               
Cow position:
               
chr20:22445969-22445626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
25-371
               

               
Cow position:
               
chr20:23679479-23679136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 231
               

               
Conread position:
               
25-385
               

               
Cow position:
               
chr20:33176868-33177216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
25-390
               

               
Cow position:
               
chr20:14756399-14756037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
25-422
               

               
Cow position:
               
chr20:40256653-40257027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
25-481
               

               
Cow position:
               
chr20:6501468-6501910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
25-497
               

               
Cow position:
               
chr20:25844399-25843932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
25-501
               

               
Cow position:
               
chr20:34001721-34001254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
25-507
               

               
Cow position:
               
chr20:33363182-33363661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 213
               

               
Conread position:
               
25-513
               

               
Cow position:
               
chr20:19363693-19363215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
25-529
               

               
Cow position:
               
chr20:26076756-26077247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
491, 100
               

               
Conread position:
               
25-531
               

               
Cow position:
               
chr20:11176579-11176087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 259
               

               
Conread position:
               
25-539
               

               
Cow position:
               
chr20:6238979-6238463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 343
               

               
Conread position:
               
25-544
               

               
Cow position:
               
chr20:11550034-11550548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 217
               

               
Conread position:
               
25-566
               

               
Cow position:
               
chr20:13652695-13652166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
25-584
               

               
Cow position:
               
chr20:8429419-8429961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 21
               

               
Conread position:
               
25-587
               

               
Cow position:
               
chr20:6423636-6424179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 38
               

               
Conread position:
               
25-598
               

               
Cow position:
               
chr20:13269295-13269850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
25-598
               

               
Cow position:
               
chr20:40176921-40177480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
25-600
               

               
Cow position:
               
chr20:28604883-28605444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr20:20983693-20984238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
496, 96
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr20:35889098-35888518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 129
               

               
Conread position:
               
25-603
               

               
Cow position:
               
chr20:38817684-38818230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 100
               

               
Conread position:
               
25-605
               

               
Cow position:
               
chr20:8577916-8578497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
25-610
               

               
Cow position:
               
chr20:13877041-13876461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 248
               

               
Conread position:
               
25-612
               

               
Cow position:
               
chr20:32847021-32847593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
25-614
               

               
Cow position:
               
chr20:4945577-4944998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
25-615
               

               
Cow position:
               
chr20:20967025-20967575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 100
               

               
Conread position:
               
25-620
               

               
Cow position:
               
chr20:23792272-23792857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 145
               

               
Conread position:
               
25-626
               

               
Cow position:
               
chr20:14806553-14807147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
25-629
               

               
Cow position:
               
chr20:6258394-6257804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr20:7710538-7710289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 155
               

               
Conread position:
               
26-288
               

               
Cow position:
               
chr20:14719071-14718809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 145
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr20:12155434-12155143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 159
               

               
Conread position:
               
26-326
               

               
Cow position:
               
chr20:18530115-18530413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
26-343
               

               
Cow position:
               
chr20:41977092-41977398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
26-344
               

               
Cow position:
               
chr20:23833806-23834115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
214, 58
               

               
Conread position:
               
26-354
               

               
Cow position:
               
chr20:15295931-15296255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
26-360
               

               
Cow position:
               
chr20:10468744-10469066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
26-370
               

               
Cow position:
               
chr20:12048077-12048404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 161
               

               
Conread position:
               
26-372
               

               
Cow position:
               
chr20:12334052-12334388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
26-380
               

               
Cow position:
               
chr20:13955714-13956066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
287, 71
               

               
Conread position:
               
26-398
               

               
Cow position:
               
chr20:31077205-31077592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
26-405
               

               
Cow position:
               
chr20:27339732-27340103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
26-429
               

               
Cow position:
               
chr20:9473944-9473548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
26-429
               

               
Cow position:
               
chr20:19313397-19313001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 120
               

               
Conread position:
               
26-435
               

               
Cow position:
               
chr20:17903828-17904229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
26-475
               

               
Cow position:
               
chr20:14210492-14210045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
100, 263
               

               
Conread position:
               
26-484
               

               
Cow position:
               
chr20:41119592-41120036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
26-511
               

               
Cow position:
               
chr20:17845623-17846105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
26-522
               

               
Cow position:
               
chr20:19459972-19459508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 20
               

               
Conread position:
               
26-524
               

               
Cow position:
               
chr20:6096815-6096336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
26-524
               

               
Cow position:
               
chr20:33144884-33144394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
26-529
               

               
Cow position:
               
chr20:581258-580756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
26-535
               

               
Cow position:
               
chr20:23871146-23870649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
26-538
               

               
Cow position:
               
chr20:19750981-19751480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
26-539
               

               
Cow position:
               
chr20:23065168-23064661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 262
               

               
Conread position:
               
26-542
               

               
Cow position:
               
chr20:9536806-9537309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
26-566
               

               
Cow position:
               
chr20:20202885-20203418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 257
               

               
Conread position:
               
26-577
               

               
Cow position:
               
chr20:22959674-22959130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
26-580
               

               
Cow position:
               
chr20:31927789-31927242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 260
               

               
Conread position:
               
26-585
               

               
Cow position:
               
chr20:30817205-30817744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
26-593
               

               
Cow position:
               
chr20:2819236-2819779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
337, 35
               

               
Conread position:
               
26-594
               

               
Cow position:
               
chr20:28982371-28982930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 91
               

               
Conread position:
               
26-600
               

               
Cow position:
               
chr20:3599722-3599164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
26-600
               

               
Cow position:
               
chr20:33531979-33532528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 194
               

               
Conread position:
               
26-607
               

               
Cow position:
               
chr20:4756153-4755589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 103
               

               
Conread position:
               
26-608
               

               
Cow position:
               
chr20:21019235-21019805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
26-608
               

               
Cow position:
               
chr20:29844714-29845301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 240
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr20:398621-398060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
26-614
               

               
Cow position:
               
chr20:35145676-35146268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 362
               

               
Conread position:
               
26-623
               

               
Cow position:
               
chr20:4621671-4621085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 82
               

               
Conread position:
               
26-625
               

               
Cow position:
               
chr20:746629-747195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 117
               

               
Conread position:
               
26-625
               

               
Cow position:
               
chr20:40423421-40422834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 266
               

               
Conread position:
               
26-628
               

               
Cow position:
               
chr20:36780060-36779456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
27-288
               

               
Cow position:
               
chr20:13817521-13817778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr20:23849962-23850234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
27-361
               

               
Cow position:
               
chr20:18185249-18185568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 205
               

               
Conread position:
               
27-366
               

               
Cow position:
               
chr20:26469408-26469057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 267
               

               
Conread position:
               
27-394
               

               
Cow position:
               
chr20:5104765-5104407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
27-405
               

               
Cow position:
               
chr20:19146537-19146917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 251
               

               
Conread position:
               
27-406
               

               
Cow position:
               
chr20:10538992-10539361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
27-537
               

               
Cow position:
               
chr20:39415425-39415922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 68
               

               
Conread position:
               
27-581
               

               
Cow position:
               
chr20:9433275-9433801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
27-603
               

               
Cow position:
               
chr20:7756957-7756396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 93
               

               
Conread position:
               
27-606
               

               
Cow position:
               
chr20:33170201-33169627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 98
               

               
Conread position:
               
27-611
               

               
Cow position:
               
chr20:13493407-13493975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 206
               

               
Conread position:
               
28-386
               

               
Cow position:
               
chr20:24391672-24392002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
212, 23
               

               
Conread position:
               
28-527
               

               
Cow position:
               
chr20:18321123-18320631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
29-354
               

               
Cow position:
               
chr20:8112486-8112812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
29-411
               

               
Cow position:
               
chr20:3781760-3781377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 219
               

               
Conread position:
               
30-386
               

               
Cow position:
               
chr20:19410692-19410338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
30-539
               

               
Cow position:
               
chr20:18392566-18392095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 102
               

               
Conread position:
               
30-601
               

               
Cow position:
               
chr20:24398958-24398404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
31-529
               

               
Cow position:
               
chr20:40781651-40782125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 94
               

               
Conread position:
               
39-497
               

               
Cow position:
               
chr20:35797286-35797741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
40-601
               

               
Cow position:
               
chr20:6054820-6054268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 18
               

               
Conread position:
               
40-601
               

               
Cow position:
               
chr20:17251394-17251958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
40-603
               

               
Cow position:
               
chr20:33435479-33434918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
40-614
               

               
Cow position:
               
chr20:34597432-34596853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
40-621
               

               
Cow position:
               
chr20:19236774-19237330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
41-601
               

               
Cow position:
               
chr20:19328086-19328637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
42-435
               

               
Cow position:
               
chr20:31069327-31069708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
42-600
               

               
Cow position:
               
chr20:12582263-12581718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
43-370
               

               
Cow position:
               
chr20:18399447-18399773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
46-426
               

               
Cow position:
               
chr20:31261422-31261785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 124
               

               
Conread position:
               
46-605
               

               
Cow position:
               
chr20:21345091-21345682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 200
               

               
Conread position:
               
46-613
               

               
Cow position:
               
chr20:34202335-34202893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 240
               

               
Conread position:
               
49-603
               

               
Cow position:
               
chr20:39398172-39398723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
51-421
               

               
Cow position:
               
chr20:3034791-3035162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 74
               

               
Conread position:
               
54-600
               

               
Cow position:
               
chr20:6240832-6240282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 237
               

               
Conread position:
               
58-421
               

               
Cow position:
               
chr20:24002030-24002372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
58-593
               

               
Cow position:
               
chr20:13751947-13752444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
58-614
               

               
Cow position:
               
chr20:25162409-25161880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
58-643
               

               
Cow position:
               
chr20:25009939-25009352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 67
               

               
Conread position:
               
67-286
               

               
Cow position:
               
chr20:22651209-22651436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
67-542
               

               
Cow position:
               
chr20:42469478-42469936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
67-629
               

               
Cow position:
               
chr20:7426479-7425923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
71-539
               

               
Cow position:
               
chr20:10884652-10884179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 226
               

               
Conread position:
               
71-539
               

               
Cow position:
               
chr20:39728165-39728625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
76-602
               

               
Cow position:
               
chr20:14759944-14759433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
82-276
               

               
Cow position:
               
chr20:39294585-39294780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
82-542
               

               
Cow position:
               
chr20:21714477-21714945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
88-507
               

               
Cow position:
               
chr20:35999418-35999835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
89-435
               

               
Cow position:
               
chr20:35958381-35958718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
89-438
               

               
Cow position:
               
chr20:7132080-7132423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 206
               

               
Conread position:
               
89-542
               

               
Cow position:
               
chr20:10178378-10177905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
91-644
               

               
Cow position:
               
chr20:7659475-7658944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
92-286
               

               
Cow position:
               
chr20:12064364-12064561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
92-539
               

               
Cow position:
               
chr20:31799458-31799029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
92-603
               

               
Cow position:
               
chr20:8703174-8702689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
92-615
               

               
Cow position:
               
chr20:42310226-42309714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr20:10034194-10033900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 197
               

               
Conread position:
               
94-386
               

               
Cow position:
               
chr20:20201729-20202016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
94-435
               

               
Cow position:
               
chr20:13967522-13967186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
95-429
               

               
Cow position:
               
chr20:24521489-24521813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 187
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr20:15582294-15582047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
98-601
               

               
Cow position:
               
chr20:39418151-39417664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 34
               

               
Conread position:
               
98-603
               

               
Cow position:
               
chr20:22064814-22065302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
98-662
               

               
Cow position:
               
chr20:5950888-5950343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 27
               

               
Conread position:
               
99-496
               

               
Cow position:
               
chr20:25686611-25686217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
107-603
               

               
Cow position:
               
chr20:22235062-22235540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
108-603
               

               
Cow position:
               
chr20:26996284-26996775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
109-628
               

               
Cow position:
               
chr20:10200095-10200619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
113-524
               

               
Cow position:
               
chr20:40127580-40127184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
115-299
               

               
Cow position:
               
chr20:31311063-31311247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
116-531
               

               
Cow position:
               
chr20:39517772-39518172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
116-603
               

               
Cow position:
               
chr20:11741544-11741075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
117-614
               

               
Cow position:
               
chr20:8556512-8556019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
119-360
               

               
Cow position:
               
chr20:21016243-21016489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
119-608
               

               
Cow position:
               
chr20:10208567-10209053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
122-428
               

               
Cow position:
               
chr20:20312971-20312684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
122-614
               

               
Cow position:
               
chr20:1640681-1640216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 164
               

               
Conread position:
               
122-627
               

               
Cow position:
               
chr20:32512749-32513270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 265
               

               
Conread position:
               
125-601
               

               
Cow position:
               
chr20:11341036-11340566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 169
               

               
Conread position:
               
125-626
               

               
Cow position:
               
chr20:35177004-35176511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
125-629
               

               
Cow position:
               
chr20:41703923-41704425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 239
               

               
Conread position:
               
126-480
               

               
Cow position:
               
chr20:3331524-3331170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 168
               

               
Conread position:
               
126-522
               

               
Cow position:
               
chr20:38768684-38768304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 115
               

               
Conread position:
               
128-439
               

               
Cow position:
               
chr20:5269297-5268992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
130-523
               

               
Cow position:
               
chr20:40511985-40511598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
130-526
               

               
Cow position:
               
chr20:41627570-41627180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
131-367
               

               
Cow position:
               
chr20:22007279-22007507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr20:14735452-14735687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr20:15148238-15147998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
131-439
               

               
Cow position:
               
chr20:22704063-22704369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 155
               

               
Conread position:
               
131-512
               

               
Cow position:
               
chr20:40185898-40185527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
241, 40
               

               
Conread position:
               
131-521
               

               
Cow position:
               
chr20:34776961-34777336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
131-532
               

               
Cow position:
               
chr20:42459076-42458687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
131-593
               

               
Cow position:
               
chr20:18551138-18551596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
131-599
               

               
Cow position:
               
chr20:382352-381897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
131-603
               

               
Cow position:
               
chr20:12420846-12420378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 154
               

               
Conread position:
               
131-608
               

               
Cow position:
               
chr20:1139998-1139521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 123
               

               
Conread position:
               
131-611
               

               
Cow position:
               
chr20:14572581-14572126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 123
               

               
Conread position:
               
131-613
               

               
Cow position:
               
chr20:7442349-7441891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr20:21928673-21929147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 154
               

               
Conread position:
               
131-615
               

               
Cow position:
               
chr20:12205937-12205491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 30
               

               
Conread position:
               
131-625
               

               
Cow position:
               
chr20:13829042-13829522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
131-631
               

               
Cow position:
               
chr20:13023702-13023234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 7
               

               
Conread position:
               
132-556
               

               
Cow position:
               
chr20:41028267-41028686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
132-603
               

               
Cow position:
               
chr20:15549121-15548651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 96
               

               
Conread position:
               
132-614
               

               
Cow position:
               
chr20:4205739-4206211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 155
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr20:11923464-11923230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr20:37200137-37200385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
134-320
               

               
Cow position:
               
chr20:14512827-14513002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
134-367
               

               
Cow position:
               
chr20:17363910-17363679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr20:14679396-14679642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
134-474
               

               
Cow position:
               
chr20:35009962-35009628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
134-489
               

               
Cow position:
               
chr20:34918056-34918395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
134-531
               

               
Cow position:
               
chr20:29805879-29805493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
134-628
               

               
Cow position:
               
chr20:20359993-20359536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
135-290
               

               
Cow position:
               
chr20:20899014-20899165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
135-421
               

               
Cow position:
               
chr20:23936635-23936348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
135-537
               

               
Cow position:
               
chr20:5826716-5827112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 151
               

               
Conread position:
               
139-514
               

               
Cow position:
               
chr20:15235547-15235901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
140-353
               

               
Cow position:
               
chr20:5025518-5025311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr20:26679908-26680138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr20:29633207-29632989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
140-466
               

               
Cow position:
               
chr20:39019480-39019797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
243, 29
               

               
Conread position:
               
140-544
               

               
Cow position:
               
chr20:6890489-6890887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 153
               

               
Conread position:
               
141-320
               

               
Cow position:
               
chr20:24902687-24902502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
142-425
               

               
Cow position:
               
chr20:9379195-9379466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
142-522
               

               
Cow position:
               
chr20:11482353-11481978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 144
               

               
Conread position:
               
142-601
               

               
Cow position:
               
chr20:28296076-28296537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 131
               

               
Conread position:
               
142-614
               

               
Cow position:
               
chr20:14879572-14880035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
143-380
               

               
Cow position:
               
chr20:8020682-8020917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
143-614
               

               
Cow position:
               
chr20:38873225-38872747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 152
               

               
Conread position:
               
144-403
               

               
Cow position:
               
chr20:6848410-6848669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
144-544
               

               
Cow position:
               
chr20:38578966-38578591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
145-421
               

               
Cow position:
               
chr20:32069069-32068795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 142
               

               
Conread position:
               
145-524
               

               
Cow position:
               
chr20:35907257-35906891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 24
               

               
Conread position:
               
146-358
               

               
Cow position:
               
chr20:35760461-35760668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
146-538
               

               
Cow position:
               
chr20:9923387-9923740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
146-630
               

               
Cow position:
               
chr20:34251888-34251403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 84
               

               
Conread position:
               
147-435
               

               
Cow position:
               
chr20:10348540-10348821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
147-512
               

               
Cow position:
               
chr20:15593087-15593433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
148-347
               

               
Cow position:
               
chr20:38415180-38414982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
149-549
               

               
Cow position:
               
chr20:38551167-38551548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
151-614
               

               
Cow position:
               
chr20:39325180-39325646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 143
               

               
Conread position:
               
151-641
               

               
Cow position:
               
chr20:38486753-38486277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
118, 105
               

               
Conread position:
               
152-320
               

               
Cow position:
               
chr20:5116508-5116341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
152-607
               

               
Cow position:
               
chr20:29754582-29755023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
152-614
               

               
Cow position:
               
chr20:12239885-12239438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
153-539
               

               
Cow position:
               
chr20:15566034-15565655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 162
               

               
Conread position:
               
156-585
               

               
Cow position:
               
chr20:6602841-6603254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
157-606
               

               
Cow position:
               
chr20:32084284-32083855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
159-421
               

               
Cow position:
               
chr20:37272522-37272771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
160-539
               

               
Cow position:
               
chr20:20739485-20739113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 95
               

               
Conread position:
               
160-628
               

               
Cow position:
               
chr20:34098154-34097684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 122
               

               
Conread position:
               
161-521
               

               
Cow position:
               
chr20:31323602-31323943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
161-614
               

               
Cow position:
               
chr20:23846867-23846414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
162-543
               

               
Cow position:
               
chr20:16556354-16556720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
162-603
               

               
Cow position:
               
chr20:27408069-27407654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
163-311
               

               
Cow position:
               
chr20:18423528-18423672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
163-349
               

               
Cow position:
               
chr20:11043689-11043513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
163-513
               

               
Cow position:
               
chr20:11542476-11542139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
163-633
               

               
Cow position:
               
chr20:34107923-34108360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
164-351
               

               
Cow position:
               
chr20:9988391-9988579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
164-524
               

               
Cow position:
               
chr20:28067618-28067265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 115
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr20:41374493-41374681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
165-599
               

               
Cow position:
               
chr20:13994618-13995047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
168-522
               

               
Cow position:
               
chr20:36207614-36207971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr20:37165540-37165852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
258, 109
               

               
Conread position:
               
172-425
               

               
Cow position:
               
chr20:34240340-34240598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 223
               

               
Conread position:
               
172-427
               

               
Cow position:
               
chr20:34364851-34365089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr20:11864320-11864061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
172-603
               

               
Cow position:
               
chr20:14980698-14980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
172-603
               

               
Cow position:
               
chr20:34920231-34919779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
172-624
               

               
Cow position:
               
chr20:3141399-3141840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 83
               

               
Conread position:
               
172-628
               

               
Cow position:
               
chr20:35741569-35742040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
173-602
               

               
Cow position:
               
chr20:11045495-11045914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
174-601
               

               
Cow position:
               
chr20:3740183-3739770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
183-360
               

               
Cow position:
               
chr20:3569233-3569066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
183-531
               

               
Cow position:
               
chr20:5636307-5636647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
183-603
               

               
Cow position:
               
chr20:16935476-16935065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
183-614
               

               
Cow position:
               
chr20:39255137-39254707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
185-475
               

               
Cow position:
               
chr20:7210864-7211149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
186-601
               

               
Cow position:
               
chr20:5814398-5814804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
187-602
               

               
Cow position:
               
chr20:7439018-7438617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 26
               

               
Conread position:
               
188-429
               

               
Cow position:
               
chr20:28831795-28832035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
188-531
               

               
Cow position:
               
chr20:3321306-3320978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 65
               

               
Conread position:
               
189-537
               

               
Cow position:
               
chr20:14100605-14100263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
189-603
               

               
Cow position:
               
chr20:3254881-3255275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
192-370
               

               
Cow position:
               
chr20:41403405-41403587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
193-539
               

               
Cow position:
               
chr20:271586-271249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 62
               

               
Conread position:
               
193-625
               

               
Cow position:
               
chr20:15312496-15312913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr20:35995307-35995504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
194-421
               

               
Cow position:
               
chr20:283091-282869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
196-405
               

               
Cow position:
               
chr20:9701735-9701528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
199-542
               

               
Cow position:
               
chr20:20241943-20242260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
292, 80
               

               
Conread position:
               
199-542
               

               
Cow position:
               
chr20:32988989-32988655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
200-638
               

               
Cow position:
               
chr20:15569106-15568685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
201-435
               

               
Cow position:
               
chr20:7623208-7622994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
202-542
               

               
Cow position:
               
chr20:21761622-21761952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
220, 88
               

               
Conread position:
               
203-404
               

               
Cow position:
               
chr20:41309383-41309579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
203-521
               

               
Cow position:
               
chr20:1575946-1576253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
173, 76
               

               
Conread position:
               
203-556
               

               
Cow position:
               
chr20:13025761-13025425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
228, 18
               

               
Conread position:
               
204-601
               

               
Cow position:
               
chr20:28441174-28441558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
205-428
               

               
Cow position:
               
chr20:39247758-39247976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
205-590
               

               
Cow position:
               
chr20:36010638-36011016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
208-614
               

               
Cow position:
               
chr20:34221326-34221734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
209-601
               

               
Cow position:
               
chr20:41089941-41089553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
209-629
               

               
Cow position:
               
chr20:4334667-4334271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 46
               

               
Conread position:
               
212-351
               

               
Cow position:
               
chr20:14917156-14917293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
212-603
               

               
Cow position:
               
chr20:30710794-30710402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
214-609
               

               
Cow position:
               
chr20:20934905-20934487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
71, 197
               

               
Conread position:
               
214-639
               

               
Cow position:
               
chr20:14433570-14433146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 68
               

               
Conread position:
               
215-603
               

               
Cow position:
               
chr20:18379241-18379618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
286, 67
               

               
Conread position:
               
216-603
               

               
Cow position:
               
chr20:32583170-32583562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr20:40446191-40446507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
219-593
               

               
Cow position:
               
chr20:8546931-8547291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
262, 21
               

               
Conread position:
               
220-539
               

               
Cow position:
               
chr20:20099725-20099427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
220-563
               

               
Cow position:
               
chr20:22484724-22485063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 70
               

               
Conread position:
               
220-601
               

               
Cow position:
               
chr20:32523329-32523702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
288, 39
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr20:4332004-4332293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
255, 50
               

               
Conread position:
               
222-608
               

               
Cow position:
               
chr20:2298911-2298552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
110, 60
               

               
Conread position:
               
222-625
               

               
Cow position:
               
chr20:29990570-29990188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
230, 52
               

               
Conread position:
               
223-366
               

               
Cow position:
               
chr20:22721887-22722030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
223-530
               

               
Cow position:
               
chr20:8098148-8098451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
223-591
               

               
Cow position:
               
chr20:22978185-22978555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
225-539
               

               
Cow position:
               
chr20:7362835-7363137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr20:4892952-4892594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
227-614
               

               
Cow position:
               
chr20:38847368-38846976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
232-614
               

               
Cow position:
               
chr20:31289374-31289754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
233-526
               

               
Cow position:
               
chr20:5385864-5385583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
234-428
               

               
Cow position:
               
chr20:30992017-30992205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
235-458
               

               
Cow position:
               
chr20:27003854-27003632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
236-564
               

               
Cow position:
               
chr20:32463641-32463323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
290, 46
               

               
Conread position:
               
239-589
               

               
Cow position:
               
chr20:33067490-33067132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
240-627
               

               
Cow position:
               
chr20:11611565-11611947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
279, 50
               

               
Conread position:
               
241-514
               

               
Cow position:
               
chr20:36040357-36040624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
211, 10
               

               
Conread position:
               
241-538
               

               
Cow position:
               
chr20:36633702-36633985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
241-566
               

               
Cow position:
               
chr20:11188920-11188610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 136
               

               
Conread position:
               
241-607
               

               
Cow position:
               
chr20:28249068-28249428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
281, 49
               

               
Conread position:
               
242-520
               

               
Cow position:
               
chr20:40691942-40692219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
243-435
               

               
Cow position:
               
chr20:34901459-34901642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
243-495
               

               
Cow position:
               
chr20:24000911-24000666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
230, 10
               

               
Conread position:
               
244-534
               

               
Cow position:
               
chr20:39267071-39266789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
250-603
               

               
Cow position:
               
chr20:28594177-28594533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
210, 33
               

               
Conread position:
               
251-506
               

               
Cow position:
               
chr20:19616381-19616633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
257-592
               

               
Cow position:
               
chr20:10188176-10188505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
257-628
               

               
Cow position:
               
chr20:15118177-15118541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
258, 33
               

               
Conread position:
               
258-595
               

               
Cow position:
               
chr20:34787041-34786709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
259, 24
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr20:23103123-23103335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
259-539
               

               
Cow position:
               
chr20:33439079-33438806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
260-623
               

               
Cow position:
               
chr20:24711739-24712104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
264-592
               

               
Cow position:
               
chr20:33976385-33976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
266-496
               

               
Cow position:
               
chr20:23506564-23506339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
267-607
               

               
Cow position:
               
chr20:23541246-23540926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
272-497
               

               
Cow position:
               
chr20:17765417-17765199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
275-576
               

               
Cow position:
               
chr20:12064841-12065130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
177, 84
               

               
Conread position:
               
280-486
               

               
Cow position:
               
chr20:40745361-40745577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
280-614
               

               
Cow position:
               
chr20:28819011-28818684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
281-628
               

               
Cow position:
               
chr20:35192699-35193025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
282-630
               

               
Cow position:
               
chr20:11548799-11548461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
283-435
               

               
Cow position:
               
chr20:37357530-37357678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
283-490
               

               
Cow position:
               
chr20:33819143-33819347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
283-567
               

               
Cow position:
               
chr20:17100284-17100564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
277, 98
               

               
Conread position:
               
283-601
               

               
Cow position:
               
chr20:16509420-16509734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
283-616
               

               
Cow position:
               
chr20:5009662-5009987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
248, 53
               

               
Conread position:
               
284-603
               

               
Cow position:
               
chr20:11135832-11135511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 38
               

               
Conread position:
               
284-618
               

               
Cow position:
               
chr20:11008093-11008427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
285-600
               

               
Cow position:
               
chr20:38868569-38868859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
285-602
               

               
Cow position:
               
chr20:32866262-32865963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
241, 23
               

               
Conread position:
               
285-606
               

               
Cow position:
               
chr20:7738301-7737990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
285-606
               

               
Cow position:
               
chr20:36741401-36741706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
285-615
               

               
Cow position:
               
chr20:5078549-5078893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
166, 102
               

               
Conread position:
               
286-603
               

               
Cow position:
               
chr20:22265319-22265022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
297, 75
               

               
Conread position:
               
286-609
               

               
Cow position:
               
chr20:5644713-5645023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
103, 87
               

               
Conread position:
               
286-614
               

               
Cow position:
               
chr20:18622508-18622827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
287-589
               

               
Cow position:
               
chr20:16548350-16548045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
289-602
               

               
Cow position:
               
chr20:21204289-21204573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
289-630
               

               
Cow position:
               
chr20:11359694-11359370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
290-539
               

               
Cow position:
               
chr20:10996039-10996283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
290-539
               

               
Cow position:
               
chr20:14563984-14564225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
186, 71
               

               
Conread position:
               
290-603
               

               
Cow position:
               
chr20:9376398-9376703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
290-611
               

               
Cow position:
               
chr20:6248665-6248349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
254, 32
               

               
Conread position:
               
290-628
               

               
Cow position:
               
chr20:16818347-16818681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
293-528
               

               
Cow position:
               
chr20:16492005-16492236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
293-606
               

               
Cow position:
               
chr20:38089845-38090161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
234, 80
               

               
Conread position:
               
293-628
               

               
Cow position:
               
chr20:27477087-27476749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 76
               

               
Conread position:
               
295-513
               

               
Cow position:
               
chr20:20056549-20056338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 78
               

               
Conread position:
               
295-538
               

               
Cow position:
               
chr20:13983298-13983528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
295-589
               

               
Cow position:
               
chr20:354961-354671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
235, 78
               

               
Conread position:
               
295-603
               

               
Cow position:
               
chr20:21428101-21428399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
295-611
               

               
Cow position:
               
chr20:7624311-7624009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
308, 43
               

               
Conread position:
               
296-633
               

               
Cow position:
               
chr20:25953194-25953538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
297-539
               

               
Cow position:
               
chr20:22030258-22030493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
229, 21
               

               
Conread position:
               
297-613
               

               
Cow position:
               
chr20:16941352-16941031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
298-595
               

               
Cow position:
               
chr20:23850559-23850854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
301-530
               

               
Cow position:
               
chr20:39962517-39962740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
302-627
               

               
Cow position:
               
chr20:38514724-38515052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
226, 58
               

               
Conread position:
               
306-541
               

               
Cow position:
               
chr20:10772150-10772383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
307-614
               

               
Cow position:
               
chr20:5702670-5702974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
309-598
               

               
Cow position:
               
chr20:20898641-20898353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
313-614
               

               
Cow position:
               
chr20:23548699-23549010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
314-601
               

               
Cow position:
               
chr20:39016922-39016630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
314-637
               

               
Cow position:
               
chr20:13068207-13067873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
315-595
               

               
Cow position:
               
chr20:1294075-1293795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
216, 41
               

               
Conread position:
               
323-539
               

               
Cow position:
               
chr20:40157864-40158074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
323-607
               

               
Cow position:
               
chr20:20125067-20124786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
209, 46
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr20:4999163-4998842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
326-539
               

               
Cow position:
               
chr20:7709819-7709608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
328-608
               

               
Cow position:
               
chr20:34083688-34083967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
329-638
               

               
Cow position:
               
chr20:16096810-16097120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
218, 36
               

               
Conread position:
               
330-603
               

               
Cow position:
               
chr20:25351437-25351185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
335-601
               

               
Cow position:
               
chr20:27623986-27624244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
339-614
               

               
Cow position:
               
chr20:14620330-14620054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
339-623
               

               
Cow position:
               
chr20:12126325-12126040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
190, 26
               

               
Conread position:
               
340-601
               

               
Cow position:
               
chr20:5364911-5365167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
186, 14
               

               
Conread position:
               
342-609
               

               
Cow position:
               
chr20:12534759-12534501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
347-601
               

               
Cow position:
               
chr20:36239228-36239489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
348-581
               

               
Cow position:
               
chr20:18831887-18831661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
362-601
               

               
Cow position:
               
chr20:20432734-20432499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
372-614
               

               
Cow position:
               
chr20:23590738-23590496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
375-628
               

               
Cow position:
               
chr20:23384309-23384562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
376-614
               

               
Cow position:
               
chr20:33623541-33623307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
194, 103
               

               
Conread position:
               
376-627
               

               
Cow position:
               
chr20:30744711-30744459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 202
               

               
Conread position:
               
388-600
               

               
Cow position:
               
chr20:24097024-24097233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
388-603
               

               
Cow position:
               
chr20:38925828-38925608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
388-614
               

               
Cow position:
               
chr20:3148707-3148933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 117
               

               
Conread position:
               
389-539
               

               
Cow position:
               
chr20:21815585-21815735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
389-603
               

               
Cow position:
               
chr20:20158160-20158372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
103, 116
               

               
Conread position:
               
390-601
               

               
Cow position:
               
chr20:15766135-15766355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr20:3564185-3564404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr20:35445078-35444853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 184
               

               
Conread position:
               
391-575
               

               
Cow position:
               
chr20:2743111-2742921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
391-601
               

               
Cow position:
               
chr20:14282946-14283162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
391-603
               

               
Cow position:
               
chr20:7417141-7416919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
391-603
               

               
Cow position:
               
chr20:8679641-8679419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
391-604
               

               
Cow position:
               
chr20:5703497-5703714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
391-608
               

               
Cow position:
               
chr20:10246027-10245817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
391-610
               

               
Cow position:
               
chr20:31148189-31148399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
391-614
               

               
Cow position:
               
chr20:36806547-36806769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 193
               

               
Conread position:
               
391-630
               

               
Cow position:
               
chr20:14490276-14490510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
391-638
               

               
Cow position:
               
chr20:14917311-14917549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
214, 124
               

               
Conread position:
               
392-597
               

               
Cow position:
               
chr20:39269058-39268847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
393-614
               

               
Cow position:
               
chr20:36312480-36312261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
396-601
               

               
Cow position:
               
chr20:12782994-12782793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
396-611
               

               
Cow position:
               
chr20:16875534-16875329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
201, 128
               

               
Conread position:
               
396-614
               

               
Cow position:
               
chr20:37919339-37919126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 128
               

               
Conread position:
               
396-628
               

               
Cow position:
               
chr20:25021459-25021694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
398-614
               

               
Cow position:
               
chr20:21291693-21291921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
400-614
               

               
Cow position:
               
chr20:19636141-19635926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
400-614
               

               
Cow position:
               
chr20:37609657-37609877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
401-603
               

               
Cow position:
               
chr20:21325362-21325566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
402-603
               

               
Cow position:
               
chr20:23358454-23358253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr20:34349170-34348967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
407-614
               

               
Cow position:
               
chr20:24883325-24883108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
409-599
               

               
Cow position:
               
chr20:7155225-7155413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
409-604
               

               
Cow position:
               
chr20:33076779-33076580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
410-603
               

               
Cow position:
               
chr20:19834785-19834590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
410-606
               

               
Cow position:
               
chr20:35442237-35442037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
410-607
               

               
Cow position:
               
chr20:3035378-3035584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
411-628
               

               
Cow position:
               
chr20:37273044-37273257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
413-588
               

               
Cow position:
               
chr20:20590253-20590078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-601
               

               
Cow position:
               
chr20:9034165-9033977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
416-603
               

               
Cow position:
               
chr20:2316374-2316186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
417-593
               

               
Cow position:
               
chr20:16291740-16291922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
419-603
               

               
Cow position:
               
chr20:19201585-19201775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
419-614
               

               
Cow position:
               
chr20:4892065-4891866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 88
               

               
Conread position:
               
419-626
               

               
Cow position:
               
chr20:26041044-26040838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 187
               

               
Conread position:
               
420-607
               

               
Cow position:
               
chr20:6473788-6473980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
439-603
               

               
Cow position:
               
chr20:33462301-33462470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
443-630
               

               
Cow position:
               
chr20:11661246-11661058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
449-601
               

               
Cow position:
               
chr20:7934366-7934517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
449-601
               

               
Cow position:
               
chr20:17544708-17544866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
449-611
               

               
Cow position:
               
chr20:34847990-34848152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
449-614
               

               
Cow position:
               
chr20:26387545-26387708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 122
               

               
Conread position:
               
449-627
               

               
Cow position:
               
chr20:11822562-11822747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
450-589
               

               
Cow position:
               
chr20:14607826-14607686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
450-590
               

               
Cow position:
               
chr20:6848980-6849123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
450-594
               

               
Cow position:
               
chr20:36097605-36097755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
450-595
               

               
Cow position:
               
chr20:20459677-20459825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
450-599
               

               
Cow position:
               
chr20:11499093-11499240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
450-601
               

               
Cow position:
               
chr20:1824543-1824392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
450-601
               

               
Cow position:
               
chr20:23880022-23879867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
450-601
               

               
Cow position:
               
chr20:25464960-25464807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
450-601
               

               
Cow position:
               
chr20:37357941-37358098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
450-603
               

               
Cow position:
               
chr20:19919731-19919577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
450-607
               

               
Cow position:
               
chr20:2798906-2798750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
450-608
               

               
Cow position:
               
chr20:31845200-31845042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
450-613
               

               
Cow position:
               
chr20:27323351-27323522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
450-614
               

               
Cow position:
               
chr20:297923-297750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
450-614
               

               
Cow position:
               
chr20:8442370-8442202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
450-614
               

               
Cow position:
               
chr20:35310410-35310584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
450-628
               

               
Cow position:
               
chr20:27315063-27315238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
450-631
               

               
Cow position:
               
chr20:30639698-30639512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 163
               

               
Conread position:
               
450-635
               

               
Cow position:
               
chr20:5078357-5078556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
451-598
               

               
Cow position:
               
chr20:37242354-37242507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
451-603
               

               
Cow position:
               
chr20:21279472-21279622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
451-603
               

               
Cow position:
               
chr20:23428456-23428311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
451-603
               

               
Cow position:
               
chr20:34271413-34271571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
451-607
               

               
Cow position:
               
chr20:7132712-7132871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
451-612
               

               
Cow position:
               
chr20:15432801-15432636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 159
               

               
Conread position:
               
451-614
               

               
Cow position:
               
chr20:8409371-8409207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
451-614
               

               
Cow position:
               
chr20:11002487-11002657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
451-614
               

               
Cow position:
               
chr20:21344553-21344723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
451-614
               

               
Cow position:
               
chr20:35589598-35589430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
451-617
               

               
Cow position:
               
chr20:41313473-41313637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
451-623
               

               
Cow position:
               
chr20:23966844-23967022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
451-625
               

               
Cow position:
               
chr20:17840831-17841005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
451-627
               

               
Cow position:
               
chr20:21018510-21018688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
451-631
               

               
Cow position:
               
chr20:35604269-35604454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
451-639
               

               
Cow position:
               
chr20:33359387-33359193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 112
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr20:16977757-16977596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr20:20202306-20202461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr20:24491942-24491786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
452-603
               

               
Cow position:
               
chr20:38061679-38061532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
452-610
               

               
Cow position:
               
chr20:17606880-17606716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
453-603
               

               
Cow position:
               
chr20:14755752-14755602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
456-599
               

               
Cow position:
               
chr20:17733468-17733319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
456-603
               

               
Cow position:
               
chr20:23506026-23506177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
456-603
               

               
Cow position:
               
chr20:34881306-34881162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
456-607
               

               
Cow position:
               
chr20:18500618-18500775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
456-614
               

               
Cow position:
               
chr20:26424497-26424660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
456-627
               

               
Cow position:
               
chr20:32636239-32636066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
456-632
               

               
Cow position:
               
chr20:17530102-17529933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
457-624
               

               
Cow position:
               
chr20:20216782-20216614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
457-630
               

               
Cow position:
               
chr20:5172704-5172876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
458-631
               

               
Cow position:
               
chr20:17524365-17524544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
459-603
               

               
Cow position:
               
chr20:35605301-35605444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
462-603
               

               
Cow position:
               
chr20:21169665-21169528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
462-628
               

               
Cow position:
               
chr20:23062247-23062419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
463-603
               

               
Cow position:
               
chr20:13805419-13805557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
465-603
               

               
Cow position:
               
chr20:4931181-4931320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
466-603
               

               
Cow position:
               
chr20:11368261-11368123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
467-613
               

               
Cow position:
               
chr20:7926938-7927085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
476-623
               

               
Cow position:
               
chr20:3502620-3502763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
507-641
               

               
Cow position:
               
chr20:2827919-2828059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.