Cow genome map

Conread name: Spl1-SPL010026C06

Conread position: 1-288
Cow position: chr3:42993014-42992743 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 31

Conread position: 1-349
Cow position: chr3:63703777-63704108 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 25, 139

Conread position: 1-514
Cow position: chr3:33327271-33327791 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 333
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 184

Conread position: 1-537
Cow position: chr3:12712351-12711810 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 292

Conread position: 2-347
Cow position: chr3:42461272-42461622 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 311

Conread position: 6-207
Cow position: chr3:49132668-49132470 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 94

Conread position: 6-382
Cow position: chr3:68342674-68342299 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 205

Conread position: 6-405
Cow position: chr3:67161517-67161917 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 105

Conread position: 6-422
Cow position: chr3:1133509-1133087 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 120

Conread position: 14-437
Cow position: chr3:45523855-45524272 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 221

Conread position: 14-522
Cow position: chr3:80581268-80581745 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 14-524
Cow position: chr3:42423746-42423236 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 247

Conread position: 14-593
Cow position: chr3:53593110-53592522 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 14-601
Cow position: chr3:68586632-68587191 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 111

Conread position: 14-625
Cow position: chr3:74233801-74234381 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 114

Conread position: 18-317
Cow position: chr3:22908237-22907940 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 108

Conread position: 22-615
Cow position: chr3:68302927-68303506 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 264

Conread position: 23-290
Cow position: chr3:68291169-68291438 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 100, 38

Conread position: 24-150
Cow position: chr3:67930989-67931116 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 24-182
Cow position: chr3:68156082-68156237 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 24-286
Cow position: chr3:41818487-41818228 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 119

Conread position: 24-367
Cow position: chr3:2483058-2483387 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 24-470
Cow position: chr3:33698326-33698769 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 100

Conread position: 24-551
Cow position: chr3:82460773-82461298 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 72

Conread position: 24-603
Cow position: chr3:4049804-4050355 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 154

Conread position: 24-603
Cow position: chr3:16752646-16752080 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 140

Conread position: 24-627
Cow position: chr3:65236620-65237218 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 201

Conread position: 25-153
Cow position: chr3:495682-495553 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 25-155
Cow position: chr3:25090498-25090628 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 98, 69

Conread position: 25-186
Cow position: chr3:59208348-59208510 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 141

Conread position: 25-247
Cow position: chr3:76155318-76155536 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 69

Conread position: 25-288
Cow position: chr3:72603953-72604220 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 98, 21

Conread position: 25-289
Cow position: chr3:3776636-3776905 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 25-290
Cow position: chr3:2901524-2901260 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 36

Conread position: 25-293
Cow position: chr3:24823577-24823849 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 83

Conread position: 25-320
Cow position: chr3:24639192-24639487 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 144

Conread position: 25-320
Cow position: chr3:61262423-61262698 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 284, 86

Conread position: 25-326
Cow position: chr3:9116512-9116801 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 0

Conread position: 25-332
Cow position: chr3:14717416-14717716 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 140

Conread position: 25-334
Cow position: chr3:76411455-76411137 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 190

Conread position: 25-354
Cow position: chr3:21178486-21178156 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 49

Conread position: 25-357
Cow position: chr3:76188299-76188617 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 99, 21

Conread position: 25-358
Cow position: chr3:23277941-23277611 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 116

Conread position: 25-358
Cow position: chr3:58951223-58951547 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 257

Conread position: 25-360
Cow position: chr3:58350181-58350522 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 59

Conread position: 25-360
Cow position: chr3:74561794-74561476 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 117

Conread position: 25-362
Cow position: chr3:79208387-79208062 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 42

Conread position: 25-364
Cow position: chr3:18557796-18558109 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 108

Conread position: 25-367
Cow position: chr3:15058008-15057668 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 101, 238

Conread position: 25-367
Cow position: chr3:69962108-69961775 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 104

Conread position: 25-372
Cow position: chr3:6853901-6853559 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 148

Conread position: 25-380
Cow position: chr3:38497546-38497897 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 101, 153

Conread position: 25-382
Cow position: chr3:2630397-2630749 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 106

Conread position: 25-390
Cow position: chr3:26894273-26894627 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 100

Conread position: 25-402
Cow position: chr3:16004382-16004014 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 84

Conread position: 25-404
Cow position: chr3:49454834-49455216 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 263

Conread position: 25-421
Cow position: chr3:28675591-28675976 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 265

Conread position: 25-422
Cow position: chr3:61678291-61678695 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 233

Conread position: 25-427
Cow position: chr3:21341361-21340965 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 131

Conread position: 25-428
Cow position: chr3:364606-364216 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 56

Conread position: 25-435
Cow position: chr3:5851325-5850926 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 25-435
Cow position: chr3:8148060-8147664 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 25-438
Cow position: chr3:9843180-9843593 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 151

Conread position: 25-465
Cow position: chr3:43528635-43528199 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 255

Conread position: 25-490
Cow position: chr3:75727987-75727524 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 262

Conread position: 25-497
Cow position: chr3:6442837-6443303 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 262

Conread position: 25-501
Cow position: chr3:46506542-46507019 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 314
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 56, 49

Conread position: 25-505
Cow position: chr3:75710915-75711380 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 151

Conread position: 25-513
Cow position: chr3:59798856-59799329 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 203

Conread position: 25-521
Cow position: chr3:24352488-24352949 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 327
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 110

Conread position: 25-524
Cow position: chr3:26219459-26218961 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 149

Conread position: 25-524
Cow position: chr3:34270536-34271006 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 25-524
Cow position: chr3:37599814-37599336 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 242

Conread position: 25-524
Cow position: chr3:49649983-49650480 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 25-531
Cow position: chr3:115823-116289 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 133

Conread position: 25-539
Cow position: chr3:35299277-35299772 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 21

Conread position: 25-539
Cow position: chr3:50762722-50763228 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 87

Conread position: 25-567
Cow position: chr3:59588121-59588645 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 271

Conread position: 25-574
Cow position: chr3:15387807-15388367 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 265

Conread position: 25-578
Cow position: chr3:54959801-54960316 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 10

Conread position: 25-580
Cow position: chr3:72390685-72391238 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 137

Conread position: 25-592
Cow position: chr3:2035901-2036467 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 21

Conread position: 25-592
Cow position: chr3:53047039-53046495 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 100

Conread position: 25-598
Cow position: chr3:29891808-29891237 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 40

Conread position: 25-598
Cow position: chr3:58540937-58540348 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 155

Conread position: 25-599
Cow position: chr3:7338175-7337617 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 79

Conread position: 25-599
Cow position: chr3:30179686-30180253 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 110

Conread position: 25-600
Cow position: chr3:74088559-74088006 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 127

Conread position: 25-601
Cow position: chr3:23169468-23168896 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 258

Conread position: 25-601
Cow position: chr3:49119429-49118858 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 10

Conread position: 25-601
Cow position: chr3:62999394-62998823 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 50

Conread position: 25-602
Cow position: chr3:77188051-77188613 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 95

Conread position: 25-603
Cow position: chr3:4461886-4461316 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 81

Conread position: 25-603
Cow position: chr3:17937249-17936673 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 274

Conread position: 25-603
Cow position: chr3:24939617-24939048 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 33

Conread position: 25-603
Cow position: chr3:49327549-49328108 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 53

Conread position: 25-603
Cow position: chr3:55733545-55734132 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 25-603
Cow position: chr3:69751099-69750561 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 206

Conread position: 25-603
Cow position: chr3:75051027-75050449 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 68

Conread position: 25-603
Cow position: chr3:80740193-80740727 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 85

Conread position: 25-605
Cow position: chr3:75479621-75480175 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 11

Conread position: 25-607
Cow position: chr3:14724900-14725494 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 71

Conread position: 25-614
Cow position: chr3:14552482-14553057 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 47

Conread position: 25-614
Cow position: chr3:17695401-17694814 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 100

Conread position: 25-614
Cow position: chr3:20803025-20802457 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 26

Conread position: 25-614
Cow position: chr3:46341065-46341667 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 119

Conread position: 25-622
Cow position: chr3:37041042-37041609 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 83

Conread position: 25-623
Cow position: chr3:2537859-2538431 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 106

Conread position: 25-625
Cow position: chr3:50768277-50768877 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 149

Conread position: 25-625
Cow position: chr3:61539399-61539993 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 251

Conread position: 25-627
Cow position: chr3:15954474-15953887 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 64

Conread position: 25-630
Cow position: chr3:29887822-29887244 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 200

Conread position: 25-630
Cow position: chr3:79902105-79902697 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 266

Conread position: 25-639
Cow position: chr3:70566136-70565521 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 258

Conread position: 26-152
Cow position: chr3:73394477-73394604 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 26-166
Cow position: chr3:50347602-50347738 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 82

Conread position: 26-167
Cow position: chr3:17058789-17058645 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 97, 124

Conread position: 26-188
Cow position: chr3:15191956-15192114 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 76

Conread position: 26-207
Cow position: chr3:30355828-30356009 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 138

Conread position: 26-222
Cow position: chr3:83845212-83845411 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 26-234
Cow position: chr3:25673521-25673320 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 72

Conread position: 26-249
Cow position: chr3:55110240-55110017 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-252
Cow position: chr3:29171987-29172213 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 26-264
Cow position: chr3:34086455-34086221 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 26-318
Cow position: chr3:14280447-14280739 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 203

Conread position: 26-320
Cow position: chr3:36657170-36656875 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 260

Conread position: 26-332
Cow position: chr3:53223045-53222733 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 260

Conread position: 26-335
Cow position: chr3:51012935-51012623 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 26-348
Cow position: chr3:80818338-80818650 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 112

Conread position: 26-354
Cow position: chr3:58383565-58383894 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 263

Conread position: 26-354
Cow position: chr3:70130217-70129883 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 186

Conread position: 26-354
Cow position: chr3:80655065-80655378 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 101

Conread position: 26-358
Cow position: chr3:27285832-27286164 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 90

Conread position: 26-363
Cow position: chr3:40345003-40345343 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 97, 200

Conread position: 26-367
Cow position: chr3:42177759-42178099 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 26-369
Cow position: chr3:16157288-16157622 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 94

Conread position: 26-371
Cow position: chr3:77226925-77227267 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 85

Conread position: 26-372
Cow position: chr3:47284443-47284781 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 110

Conread position: 26-404
Cow position: chr3:29807066-29807438 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 107

Conread position: 26-421
Cow position: chr3:41367379-41366991 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 26-422
Cow position: chr3:80082214-80081823 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 157

Conread position: 26-426
Cow position: chr3:2903693-2903300 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 26-434
Cow position: chr3:27544729-27544333 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 13

Conread position: 26-435
Cow position: chr3:19708494-19708101 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 26-435
Cow position: chr3:39328015-39328403 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 146

Conread position: 26-436
Cow position: chr3:49793016-49793400 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 141

Conread position: 26-439
Cow position: chr3:66374932-66375327 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 26-449
Cow position: chr3:59514726-59515121 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 26-485
Cow position: chr3:31047339-31046899 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 159

Conread position: 26-489
Cow position: chr3:66610235-66609787 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 210

Conread position: 26-496
Cow position: chr3:53588789-53588320 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 202

Conread position: 26-497
Cow position: chr3:26554111-26553650 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 101

Conread position: 26-509
Cow position: chr3:49218704-49218225 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-509
Cow position: chr3:61839894-61840353 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 108

Conread position: 26-512
Cow position: chr3:72675691-72676171 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 63

Conread position: 26-513
Cow position: chr3:26920502-26920991 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 63

Conread position: 26-518
Cow position: chr3:38346806-38347276 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 107

Conread position: 26-522
Cow position: chr3:55085586-55085079 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 25

Conread position: 26-522
Cow position: chr3:58766895-58767353 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 59

Conread position: 26-524
Cow position: chr3:55272429-55271953 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 50

Conread position: 26-526
Cow position: chr3:62827010-62826525 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 84

Conread position: 26-534
Cow position: chr3:79292431-79292929 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 116

Conread position: 26-536
Cow position: chr3:80053930-80053440 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 45

Conread position: 26-537
Cow position: chr3:59691508-59691993 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 26-538
Cow position: chr3:59630897-59630407 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 231

Conread position: 26-539
Cow position: chr3:14262998-14263499 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 99

Conread position: 26-544
Cow position: chr3:48296314-48296812 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 146

Conread position: 26-558
Cow position: chr3:73708663-73709176 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 13

Conread position: 26-586
Cow position: chr3:55117365-55116820 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 32

Conread position: 26-588
Cow position: chr3:16656863-16656326 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 26-591
Cow position: chr3:7566811-7566259 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 57

Conread position: 26-593
Cow position: chr3:59001137-59000599 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 26-599
Cow position: chr3:60933035-60933588 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 99

Conread position: 26-600
Cow position: chr3:26903720-26904270 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 109

Conread position: 26-600
Cow position: chr3:54434576-54435139 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 26-600
Cow position: chr3:64011211-64010637 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 56

Conread position: 26-601
Cow position: chr3:48241225-48241778 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 10

Conread position: 26-601
Cow position: chr3:67929668-67929087 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 174

Conread position: 26-602
Cow position: chr3:79094463-79093888 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 106

Conread position: 26-603
Cow position: chr3:45881508-45882073 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 261

Conread position: 26-603
Cow position: chr3:48252498-48253053 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 26-603
Cow position: chr3:48362686-48363243 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 173

Conread position: 26-603
Cow position: chr3:59473719-59474294 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 130

Conread position: 26-603
Cow position: chr3:65413684-65413092 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 156

Conread position: 26-603
Cow position: chr3:65968764-65969348 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 50

Conread position: 26-606
Cow position: chr3:71231009-71231575 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 207

Conread position: 26-607
Cow position: chr3:79220453-79221031 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 45

Conread position: 26-610
Cow position: chr3:18393779-18393219 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 40

Conread position: 26-612
Cow position: chr3:2506876-2506291 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 132

Conread position: 26-612
Cow position: chr3:35884350-35883749 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 189

Conread position: 26-613
Cow position: chr3:39065936-39066513 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 267

Conread position: 26-614
Cow position: chr3:14466101-14465531 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 181

Conread position: 26-614
Cow position: chr3:18459917-18459351 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 225

Conread position: 26-614
Cow position: chr3:31225058-31225608 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 37

Conread position: 26-614
Cow position: chr3:57577303-57577879 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 26-615
Cow position: chr3:45184237-45183635 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 40

Conread position: 26-616
Cow position: chr3:18184677-18185271 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 26-627
Cow position: chr3:20129551-20130136 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 26-627
Cow position: chr3:77271674-77271090 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 52

Conread position: 26-627
Cow position: chr3:80564564-80565159 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 77

Conread position: 26-628
Cow position: chr3:4457471-4456897 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 26-631
Cow position: chr3:1830962-1830369 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 174

Conread position: 26-633
Cow position: chr3:53384681-53384077 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 207

Conread position: 26-634
Cow position: chr3:23735499-23734883 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 26-635
Cow position: chr3:9663584-9662963 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 278

Conread position: 26-638
Cow position: chr3:51032948-51033581 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 26-640
Cow position: chr3:2674632-2675244 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 27-258
Cow position: chr3:20997367-20997144 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 27-310
Cow position: chr3:68705016-68704729 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 27-322
Cow position: chr3:75143427-75143135 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 12

Conread position: 27-349
Cow position: chr3:53903793-53904102 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 98

Conread position: 27-354
Cow position: chr3:31422342-31422025 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 47

Conread position: 27-360
Cow position: chr3:43658111-43657774 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 23

Conread position: 27-367
Cow position: chr3:7408088-7408430 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 40

Conread position: 27-370
Cow position: chr3:15662094-15661756 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 98

Conread position: 27-372
Cow position: chr3:7857957-7858314 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 34

Conread position: 27-419
Cow position: chr3:45312655-45313037 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 146

Conread position: 27-422
Cow position: chr3:57554241-57553858 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 85

Conread position: 27-428
Cow position: chr3:48269466-48269861 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 260

Conread position: 27-511
Cow position: chr3:50069391-50069842 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 39

Conread position: 27-530
Cow position: chr3:14626546-14626052 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 144

Conread position: 27-531
Cow position: chr3:61278518-61279007 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 27-537
Cow position: chr3:52017363-52017876 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 136

Conread position: 27-539
Cow position: chr3:46900790-46901301 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 27-557
Cow position: chr3:6689598-6690131 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 58

Conread position: 27-592
Cow position: chr3:82056504-82055965 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 71

Conread position: 27-602
Cow position: chr3:3032005-3032582 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 98

Conread position: 27-603
Cow position: chr3:50614249-50614797 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 127

Conread position: 27-607
Cow position: chr3:11254542-11253986 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 27-608
Cow position: chr3:79592285-79591720 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 268

Conread position: 27-615
Cow position: chr3:13899850-13899268 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 269

Conread position: 27-627
Cow position: chr3:31419300-31419894 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 219

Conread position: 27-655
Cow position: chr3:59648868-59649478 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 20

Conread position: 28-204
Cow position: chr3:17899429-17899602 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 28-304
Cow position: chr3:84152920-84153203 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 98, 264

Conread position: 28-321
Cow position: chr3:39554708-39554417 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 98, 70

Conread position: 28-367
Cow position: chr3:22872447-22872106 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 28-382
Cow position: chr3:36174471-36174113 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 98, 258

Conread position: 28-421
Cow position: chr3:3164887-3164506 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 28-601
Cow position: chr3:2024773-2025375 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 246

Conread position: 28-607
Cow position: chr3:76173057-76172504 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 171

Conread position: 29-542
Cow position: chr3:49382558-49383058 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 226

Conread position: 29-603
Cow position: chr3:5365291-5365839 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 200

Conread position: 30-321
Cow position: chr3:73962072-73961785 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 206

Conread position: 30-360
Cow position: chr3:8716854-8717186 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 140

Conread position: 30-372
Cow position: chr3:44535153-44534814 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 131

Conread position: 30-601
Cow position: chr3:25690400-25690972 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 81

Conread position: 31-350
Cow position: chr3:48530246-48530569 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 117

Conread position: 31-430
Cow position: chr3:31500963-31501346 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 80

Conread position: 35-637
Cow position: chr3:31298545-31297951 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 91

Conread position: 38-619
Cow position: chr3:53221643-53222203 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 73

Conread position: 40-326
Cow position: chr3:58158835-58158563 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 203, 72

Conread position: 40-435
Cow position: chr3:69849885-69849504 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 194

Conread position: 40-493
Cow position: chr3:46350264-46350732 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 357

Conread position: 40-603
Cow position: chr3:56582464-56583022 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 49

Conread position: 41-403
Cow position: chr3:35283466-35283118 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 5

Conread position: 41-589
Cow position: chr3:11986949-11987488 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 92

Conread position: 41-613
Cow position: chr3:68146206-68145668 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 41-613
Cow position: chr3:74499858-74500438 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 73

Conread position: 42-537
Cow position: chr3:53573127-53572647 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 6

Conread position: 42-614
Cow position: chr3:54782392-54781808 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 149

Conread position: 43-614
Cow position: chr3:7763289-7763843 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 43-615
Cow position: chr3:18066754-18067316 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 241

Conread position: 45-302
Cow position: chr3:54789598-54789848 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 46-413
Cow position: chr3:49230638-49230999 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 110

Conread position: 46-591
Cow position: chr3:49461314-49460764 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 249

Conread position: 46-603
Cow position: chr3:13352983-13353538 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 125

Conread position: 46-614
Cow position: chr3:10958602-10958061 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 79

Conread position: 49-306
Cow position: chr3:34603610-34603870 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 112

Conread position: 49-359
Cow position: chr3:20471740-20471433 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 128

Conread position: 49-536
Cow position: chr3:24934985-24935468 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 25

Conread position: 49-539
Cow position: chr3:31206499-31206983 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 40

Conread position: 50-524
Cow position: chr3:36672377-36671903 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 58-320
Cow position: chr3:79905277-79905024 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 113

Conread position: 58-353
Cow position: chr3:56697574-56697871 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 229

Conread position: 58-364
Cow position: chr3:58286262-58285961 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 61

Conread position: 58-518
Cow position: chr3:59101475-59101913 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 31

Conread position: 58-527
Cow position: chr3:10346982-10347450 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 233

Conread position: 58-531
Cow position: chr3:5101125-5100671 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 121

Conread position: 58-600
Cow position: chr3:60597189-60597708 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 34

Conread position: 58-603
Cow position: chr3:79884851-79884306 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 113

Conread position: 58-628
Cow position: chr3:61225099-61224551 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 173

Conread position: 59-511
Cow position: chr3:58969252-58968824 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 59-614
Cow position: chr3:28908567-28908030 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 186

Conread position: 59-620
Cow position: chr3:22676443-22675916 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 66

Conread position: 59-637
Cow position: chr3:55190109-55189542 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 23

Conread position: 61-506
Cow position: chr3:51604969-51604541 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 234

Conread position: 63-614
Cow position: chr3:68647800-68648361 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 224

Conread position: 65-249
Cow position: chr3:76927216-76927392 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 38

Conread position: 65-335
Cow position: chr3:65019974-65020245 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 221

Conread position: 66-520
Cow position: chr3:83816158-83815700 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 223

Conread position: 66-542
Cow position: chr3:57760126-57760608 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 233

Conread position: 66-626
Cow position: chr3:53270463-53271032 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 225

Conread position: 67-600
Cow position: chr3:53149970-53150504 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 207

Conread position: 69-360
Cow position: chr3:12323714-12324008 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 86

Conread position: 70-373
Cow position: chr3:61361064-61361351 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 70-630
Cow position: chr3:59604518-59605042 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 103

Conread position: 71-413
Cow position: chr3:17952304-17952639 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 186

Conread position: 71-538
Cow position: chr3:67544226-67543764 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 310
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 5

Conread position: 73-631
Cow position: chr3:71497496-71496925 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 186

Conread position: 76-271
Cow position: chr3:56160958-56161156 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 84, 41

Conread position: 76-286
Cow position: chr3:72927104-72926894 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 84

Conread position: 76-353
Cow position: chr3:11640090-11640360 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 76-372
Cow position: chr3:31903455-31903168 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 93

Conread position: 76-485
Cow position: chr3:72018776-72019169 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 76-600
Cow position: chr3:70895700-70896210 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 20

Conread position: 78-625
Cow position: chr3:80071772-80072341 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 92

Conread position: 79-607
Cow position: chr3:48852305-48851788 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 38

Conread position: 80-310
Cow position: chr3:29311192-29310963 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 204

Conread position: 80-601
Cow position: chr3:16547333-16547842 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 214

Conread position: 80-603
Cow position: chr3:83474406-83474928 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 83

Conread position: 80-626
Cow position: chr3:17222494-17221936 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 67

Conread position: 80-639
Cow position: chr3:49678778-49679345 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 218

Conread position: 81-599
Cow position: chr3:209980-210492 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 155

Conread position: 81-603
Cow position: chr3:2393314-2392795 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 219

Conread position: 82-472
Cow position: chr3:61171843-61171467 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 83-360
Cow position: chr3:4222979-4223247 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 94, 34

Conread position: 83-632
Cow position: chr3:61857156-61857710 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 212

Conread position: 84-528
Cow position: chr3:64172107-64172536 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 279
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 13

Conread position: 84-539
Cow position: chr3:81471436-81470987 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 41

Conread position: 86-600
Cow position: chr3:15052279-15051781 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 95

Conread position: 88-379
Cow position: chr3:2015440-2015724 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 37

Conread position: 88-603
Cow position: chr3:78076857-78077364 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 37

Conread position: 89-297
Cow position: chr3:48900836-48900630 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 110

Conread position: 89-614
Cow position: chr3:80973019-80973537 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 198

Conread position: 89-631
Cow position: chr3:65058368-65058901 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 91-602
Cow position: chr3:59596873-59597346 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 92-421
Cow position: chr3:59271228-59271532 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 77

Conread position: 93-382
Cow position: chr3:77224784-77225071 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 33, 167

Conread position: 93-577
Cow position: chr3:53739519-53739049 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 93-599
Cow position: chr3:54903244-54903737 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 5

Conread position: 94-282
Cow position: chr3:13350587-13350776 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 32

Conread position: 94-367
Cow position: chr3:82657414-82657144 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 157

Conread position: 94-603
Cow position: chr3:71246706-71247188 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 343
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 78

Conread position: 94-627
Cow position: chr3:55970178-55970715 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 95-370
Cow position: chr3:81939926-81940200 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 95-507
Cow position: chr3:27546158-27545744 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 277
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 163, 21

Conread position: 95-558
Cow position: chr3:28898556-28898090 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 98-367
Cow position: chr3:83920876-83921138 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 27

Conread position: 98-606
Cow position: chr3:83490751-83491257 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 203

Conread position: 100-577
Cow position: chr3:74600796-74601260 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 103-537
Cow position: chr3:67704216-67704651 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 183

Conread position: 103-603
Cow position: chr3:20256873-20257394 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 191

Conread position: 103-606
Cow position: chr3:57754800-57754298 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 104-421
Cow position: chr3:78200948-78201257 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 183

Conread position: 106-528
Cow position: chr3:53112851-53113271 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 179

Conread position: 106-590
Cow position: chr3:24549149-24548673 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 135

Conread position: 109-531
Cow position: chr3:75046181-75045777 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 374, 18

Conread position: 112-611
Cow position: chr3:53790855-53790360 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 114-316
Cow position: chr3:23417174-23416978 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 61

Conread position: 114-484
Cow position: chr3:65800286-65800637 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 47

Conread position: 115-398
Cow position: chr3:35975413-35975136 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 11, 126

Conread position: 115-601
Cow position: chr3:59611024-59610547 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 61

Conread position: 117-492
Cow position: chr3:23092292-23091916 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 15

Conread position: 117-623
Cow position: chr3:27274233-27274720 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 68

Conread position: 119-350
Cow position: chr3:18763591-18763820 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 176, 113

Conread position: 119-420
Cow position: chr3:83934211-83934496 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 45, 70

Conread position: 119-531
Cow position: chr3:70401600-70401995 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 119-623
Cow position: chr3:53909811-53910299 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 119-626
Cow position: chr3:2518840-2518341 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 174

Conread position: 120-421
Cow position: chr3:24305207-24304926 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 120-650
Cow position: chr3:30463468-30462954 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 159

Conread position: 121-404
Cow position: chr3:13478218-13478485 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 21

Conread position: 121-475
Cow position: chr3:31037291-31036954 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 333, 119

Conread position: 121-539
Cow position: chr3:52863482-52863076 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 121-605
Cow position: chr3:82020150-82019667 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 122-371
Cow position: chr3:7678373-7678613 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 122-371
Cow position: chr3:49787110-49787358 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 118, 33

Conread position: 122-521
Cow position: chr3:45647835-45648219 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 129

Conread position: 122-528
Cow position: chr3:2216060-2216464 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 47

Conread position: 122-628
Cow position: chr3:72473607-72474118 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 170

Conread position: 125-367
Cow position: chr3:13577479-13577248 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 6, 0

Conread position: 125-413
Cow position: chr3:30055744-30055462 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 8

Conread position: 125-430
Cow position: chr3:11019821-11020116 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 128, 91

Conread position: 126-370
Cow position: chr3:25691452-25691698 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 160

Conread position: 126-374
Cow position: chr3:66116409-66116163 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 5, 180

Conread position: 126-421
Cow position: chr3:70333769-70333492 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 44

Conread position: 128-336
Cow position: chr3:19198387-19198585 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 154, 0

Conread position: 128-350
Cow position: chr3:79148570-79148345 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 166

Conread position: 128-382
Cow position: chr3:28939210-28938952 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 9

Conread position: 128-481
Cow position: chr3:71430507-71430155 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 128-616
Cow position: chr3:72121-72603 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 103

Conread position: 131-274
Cow position: chr3:49784020-49784163 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 131-344
Cow position: chr3:44861599-44861385 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 109, 178

Conread position: 131-409
Cow position: chr3:74699686-74699412 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 69

Conread position: 131-411
Cow position: chr3:4031677-4031953 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 153

Conread position: 131-492
Cow position: chr3:20437936-20437596 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 131-507
Cow position: chr3:68583293-68582925 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 38

Conread position: 131-511
Cow position: chr3:56660-56298 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 40

Conread position: 131-513
Cow position: chr3:5096912-5097288 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 114

Conread position: 131-535
Cow position: chr3:17895563-17895950 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 87

Conread position: 131-537
Cow position: chr3:78894605-78894236 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 390, 97

Conread position: 131-539
Cow position: chr3:78946130-78945732 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 131-599
Cow position: chr3:45647386-45647836 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 131-599
Cow position: chr3:63179577-63180034 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 109

Conread position: 131-600
Cow position: chr3:23471759-23471292 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 166

Conread position: 131-600
Cow position: chr3:54740162-54739729 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 131-601
Cow position: chr3:54050310-54049857 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 90

Conread position: 131-602
Cow position: chr3:64281227-64280765 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 152

Conread position: 131-603
Cow position: chr3:29360426-29359990 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 40

Conread position: 131-603
Cow position: chr3:29812953-29813400 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 38

Conread position: 131-603
Cow position: chr3:67744919-67744466 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 153

Conread position: 131-603
Cow position: chr3:68708292-68707848 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 39

Conread position: 131-608
Cow position: chr3:39970163-39969684 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 155

Conread position: 131-614
Cow position: chr3:7331413-7330953 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 334
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 160

Conread position: 131-614
Cow position: chr3:15158750-15159217 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 151

Conread position: 132-330
Cow position: chr3:73956736-73956932 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 181, 118

Conread position: 132-349
Cow position: chr3:55815054-55815261 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 132-360
Cow position: chr3:11949643-11949422 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 173, 0

Conread position: 132-508
Cow position: chr3:45534589-45534219 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 38

Conread position: 132-513
Cow position: chr3:19006377-19006738 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 108

Conread position: 132-514
Cow position: chr3:54862714-54862337 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 247
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 156

Conread position: 132-539
Cow position: chr3:62789494-62789068 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 257

Conread position: 132-601
Cow position: chr3:17957177-17957633 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 132-603
Cow position: chr3:3985040-3985491 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 122

Conread position: 132-603
Cow position: chr3:9641274-9641729 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 151

Conread position: 132-603
Cow position: chr3:68881399-68880957 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 38

Conread position: 132-614
Cow position: chr3:31309644-31309169 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 15

Conread position: 132-614
Cow position: chr3:76138200-76138647 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 470, 9

Conread position: 132-625
Cow position: chr3:15229109-15228645 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 108

Conread position: 133-601
Cow position: chr3:29596106-29596567 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 134-351
Cow position: chr3:51609528-51609746 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 152

Conread position: 134-354
Cow position: chr3:18854805-18855023 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 94

Conread position: 134-359
Cow position: chr3:56704825-56704611 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 134-367
Cow position: chr3:34316252-34316017 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 119, 175

Conread position: 134-371
Cow position: chr3:62292404-62292178 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 209, 55

Conread position: 134-382
Cow position: chr3:54770718-54770965 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 15

Conread position: 134-386
Cow position: chr3:23111792-23111545 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 134-485
Cow position: chr3:73759807-73759464 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 134-496
Cow position: chr3:48629874-48629525 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 120

Conread position: 134-539
Cow position: chr3:56059519-56059918 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 97

Conread position: 134-544
Cow position: chr3:8393651-8394056 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 119

Conread position: 134-599
Cow position: chr3:55124566-55124115 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 145

Conread position: 134-603
Cow position: chr3:14602001-14601538 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 35

Conread position: 134-614
Cow position: chr3:23876710-23877181 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 105

Conread position: 134-626
Cow position: chr3:66885328-66884832 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 154

Conread position: 135-492
Cow position: chr3:36100541-36100897 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 235
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 107, 159

Conread position: 135-523
Cow position: chr3:66292465-66292085 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 35

Conread position: 135-542
Cow position: chr3:73443374-73442986 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 135-614
Cow position: chr3:73467332-73467811 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 74

Conread position: 136-520
Cow position: chr3:38691692-38691318 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 34

Conread position: 136-539
Cow position: chr3:17935209-17934828 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 98

Conread position: 136-600
Cow position: chr3:71161508-71161959 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 123

Conread position: 136-611
Cow position: chr3:8393060-8393521 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 150

Conread position: 136-614
Cow position: chr3:33253164-33252707 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 137-421
Cow position: chr3:19789404-19789125 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 134

Conread position: 137-603
Cow position: chr3:5374051-5374483 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 5

Conread position: 138-318
Cow position: chr3:16077614-16077791 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 138-334
Cow position: chr3:29507312-29507498 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 0

Conread position: 138-380
Cow position: chr3:81401584-81401353 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 115, 21

Conread position: 138-382
Cow position: chr3:49140331-49140086 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 25

Conread position: 138-524
Cow position: chr3:59208530-59208886 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 138-600
Cow position: chr3:73764477-73764044 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 41

Conread position: 139-356
Cow position: chr3:51227872-51228100 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 127

Conread position: 139-371
Cow position: chr3:39171767-39171538 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 143

Conread position: 139-427
Cow position: chr3:5416514-5416225 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 154

Conread position: 140-380
Cow position: chr3:81473722-81473963 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 128

Conread position: 140-542
Cow position: chr3:3738209-3738591 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 101, 28

Conread position: 140-592
Cow position: chr3:66901024-66900564 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 196

Conread position: 140-614
Cow position: chr3:20675161-20674694 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 140-628
Cow position: chr3:14801469-14801943 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 84

Conread position: 141-334
Cow position: chr3:55460782-55460580 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 141-360
Cow position: chr3:22170908-22171121 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 100

Conread position: 141-360
Cow position: chr3:32597209-32596993 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 164, 0

Conread position: 141-603
Cow position: chr3:77365575-77365118 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 78

Conread position: 141-607
Cow position: chr3:17456550-17456089 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 155

Conread position: 142-293
Cow position: chr3:23477955-23478107 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 142-342
Cow position: chr3:34392376-34392181 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 27

Conread position: 142-381
Cow position: chr3:49337454-49337677 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 142-421
Cow position: chr3:63861181-63860900 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 200

Conread position: 142-435
Cow position: chr3:75057394-75057127 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 142-600
Cow position: chr3:49482984-49482543 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 28

Conread position: 142-603
Cow position: chr3:26065721-26066161 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 142

Conread position: 142-603
Cow position: chr3:75570721-75570272 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 299, 30

Conread position: 142-616
Cow position: chr3:57763943-57764402 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 144

Conread position: 142-625
Cow position: chr3:38863833-38864317 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 142-630
Cow position: chr3:75158085-75158552 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 94

Conread position: 143-378
Cow position: chr3:42588070-42588309 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 143-420
Cow position: chr3:49731916-49731651 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 143-495
Cow position: chr3:50259147-50258797 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 26

Conread position: 143-531
Cow position: chr3:57624184-57624563 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 101

Conread position: 143-593
Cow position: chr3:78443842-78443403 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 143

Conread position: 143-612
Cow position: chr3:44101702-44102152 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 72

Conread position: 143-641
Cow position: chr3:42483621-42484139 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 136

Conread position: 144-363
Cow position: chr3:42367767-42367565 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 144-588
Cow position: chr3:68627953-68627528 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 89

Conread position: 144-617
Cow position: chr3:32584880-32585340 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 96

Conread position: 145-613
Cow position: chr3:23408619-23408180 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 146-398
Cow position: chr3:5899550-5899797 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 191, 26

Conread position: 146-539
Cow position: chr3:13507190-13507575 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 13

Conread position: 146-600
Cow position: chr3:6873521-6873100 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 137

Conread position: 148-590
Cow position: chr3:70334977-70334531 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 148-597
Cow position: chr3:54945851-54946289 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 29

Conread position: 149-603
Cow position: chr3:525081-525500 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 84

Conread position: 150-592
Cow position: chr3:69417061-69416615 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 147

Conread position: 150-601
Cow position: chr3:45279185-45279641 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 151-429
Cow position: chr3:84000341-84000610 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 152-280
Cow position: chr3:9638863-9638736 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 152-318
Cow position: chr3:1299963-1300130 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 102

Conread position: 152-598
Cow position: chr3:13302126-13301680 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 103

Conread position: 152-614
Cow position: chr3:51578591-51578139 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 131

Conread position: 153-422
Cow position: chr3:17451203-17450949 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 133

Conread position: 155-328
Cow position: chr3:22716548-22716379 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 128

Conread position: 155-409
Cow position: chr3:59701746-59701986 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 156-528
Cow position: chr3:15192297-15192676 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 191

Conread position: 157-354
Cow position: chr3:55970960-55971154 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 127

Conread position: 157-405
Cow position: chr3:4087431-4087186 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 157-603
Cow position: chr3:73394851-73395289 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 136

Conread position: 158-591
Cow position: chr3:74119706-74119268 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 304
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 95, 16

Conread position: 159-429
Cow position: chr3:28692692-28692432 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 159-542
Cow position: chr3:2680249-2680623 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 10

Conread position: 160-543
Cow position: chr3:73460717-73461079 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 330, 18

Conread position: 160-603
Cow position: chr3:75080504-75080926 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 126

Conread position: 161-386
Cow position: chr3:73590259-73590038 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 215, 27

Conread position: 161-597
Cow position: chr3:51234357-51233936 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 161-628
Cow position: chr3:39661709-39661255 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 19

Conread position: 163-385
Cow position: chr3:45307675-45307891 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 73, 119

Conread position: 163-443
Cow position: chr3:16362998-16362724 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 121

Conread position: 163-580
Cow position: chr3:52607924-52608332 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 123

Conread position: 163-603
Cow position: chr3:16333547-16333979 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 87

Conread position: 164-366
Cow position: chr3:8604272-8604074 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 114, 0

Conread position: 164-540
Cow position: chr3:8733591-8733249 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 18

Conread position: 164-555
Cow position: chr3:61143835-61144216 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 189

Conread position: 164-600
Cow position: chr3:8060874-8061291 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 66

Conread position: 164-602
Cow position: chr3:71237899-71238322 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 164-630
Cow position: chr3:30009168-30008706 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 126

Conread position: 165-474
Cow position: chr3:22820312-22820613 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 203, 65

Conread position: 165-485
Cow position: chr3:14633244-14632930 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 66

Conread position: 165-611
Cow position: chr3:56476425-56476856 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 165-626
Cow position: chr3:3556287-3556745 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 17

Conread position: 166-359
Cow position: chr3:23269846-23270031 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 166-603
Cow position: chr3:18686660-18687075 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 64

Conread position: 167-405
Cow position: chr3:48578586-48578814 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 201, 45

Conread position: 167-429
Cow position: chr3:52650788-52650529 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 114

Conread position: 167-600
Cow position: chr3:26970570-26970982 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 117

Conread position: 168-439
Cow position: chr3:41328201-41328448 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 169-628
Cow position: chr3:5045063-5044603 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 171-484
Cow position: chr3:11711702-11712017 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 69, 29

Conread position: 171-603
Cow position: chr3:52652325-52651906 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 82

Conread position: 172-535
Cow position: chr3:15752878-15752533 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 286, 59

Conread position: 174-469
Cow position: chr3:63332562-63332855 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 193

Conread position: 174-542
Cow position: chr3:43571492-43571858 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 258, 108

Conread position: 174-603
Cow position: chr3:44932260-44932686 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 112

Conread position: 174-617
Cow position: chr3:43233255-43233690 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 112

Conread position: 176-498
Cow position: chr3:23445136-23444822 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 63

Conread position: 176-544
Cow position: chr3:55836075-55835710 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 110

Conread position: 178-381
Cow position: chr3:77006261-77006446 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 178-382
Cow position: chr3:35074437-35074637 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 39

Conread position: 180-628
Cow position: chr3:12705801-12705349 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 115

Conread position: 182-434
Cow position: chr3:83201768-83201523 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 61, 104

Conread position: 183-371
Cow position: chr3:80922329-80922522 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 58

Conread position: 183-635
Cow position: chr3:22232882-22232465 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 184-539
Cow position: chr3:17447847-17447508 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 84

Conread position: 187-363
Cow position: chr3:23215819-23215635 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 187-603
Cow position: chr3:68156495-68156901 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 50, 81

Conread position: 188-347
Cow position: chr3:4861455-4861608 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 188-356
Cow position: chr3:29334748-29334581 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 97

Conread position: 188-490
Cow position: chr3:34937606-34937902 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 51

Conread position: 189-435
Cow position: chr3:55106676-55106436 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 51, 97

Conread position: 189-565
Cow position: chr3:67930411-67930055 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 38

Conread position: 189-614
Cow position: chr3:17134106-17134516 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 67

Conread position: 190-628
Cow position: chr3:81087842-81087441 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 50

Conread position: 191-627
Cow position: chr3:78092740-78092313 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 9

Conread position: 192-628
Cow position: chr3:188629-189074 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 99

Conread position: 193-498
Cow position: chr3:76015070-76015358 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 193-539
Cow position: chr3:59621865-59621541 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 194-354
Cow position: chr3:53836913-53836757 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 195-542
Cow position: chr3:15506220-15506557 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 48, 91

Conread position: 196-423
Cow position: chr3:66866626-66866405 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 222, 94

Conread position: 196-523
Cow position: chr3:26960821-26960497 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 44, 90

Conread position: 197-577
Cow position: chr3:74134480-74134855 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 85

Conread position: 197-603
Cow position: chr3:63315906-63316301 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 96

Conread position: 198-590
Cow position: chr3:56612132-56612523 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 18

Conread position: 198-631
Cow position: chr3:74754105-74754514 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 280
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 200-370
Cow position: chr3:2198660-2198827 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 79

Conread position: 200-600
Cow position: chr3:83215031-83215440 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 178

Conread position: 202-438
Cow position: chr3:15859891-15859660 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 84

Conread position: 203-371
Cow position: chr3:55063087-55062924 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 204-497
Cow position: chr3:78896430-78896712 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 69

Conread position: 205-465
Cow position: chr3:35005560-35005809 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 51

Conread position: 206-362
Cow position: chr3:23265511-23265358 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 206-524
Cow position: chr3:63269013-63269314 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 295, 11

Conread position: 206-598
Cow position: chr3:25944861-25945264 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 206-601
Cow position: chr3:45211079-45211476 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 206-614
Cow position: chr3:23105582-23105180 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 76

Conread position: 206-626
Cow position: chr3:4319494-4319916 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 80

Conread position: 206-626
Cow position: chr3:46006247-46005818 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 297
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 80

Conread position: 207-603
Cow position: chr3:70609407-70609799 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 79

Conread position: 207-603
Cow position: chr3:76713537-76713138 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 283
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 279, 33

Conread position: 208-419
Cow position: chr3:3062348-3062555 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 57

Conread position: 208-422
Cow position: chr3:25059859-25060070 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 85

Conread position: 208-429
Cow position: chr3:62790234-62790009 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 105

Conread position: 208-486
Cow position: chr3:74878804-74878535 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 208-600
Cow position: chr3:83845690-83846073 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 274
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 74

Conread position: 209-436
Cow position: chr3:21693728-21693955 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 89

Conread position: 210-637
Cow position: chr3:79825127-79824712 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 270
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 338, 18

Conread position: 212-426
Cow position: chr3:1534831-1534622 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 27

Conread position: 212-599
Cow position: chr3:36375758-36375368 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 214-350
Cow position: chr3:30357457-30357325 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 214-509
Cow position: chr3:15904179-15903884 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 194
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 89

Conread position: 214-634
Cow position: chr3:55319106-55318695 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 20

Conread position: 216-505
Cow position: chr3:27697189-27696906 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 70

Conread position: 217-630
Cow position: chr3:55712220-55712635 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 69

Conread position: 218-419
Cow position: chr3:59885180-59885380 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 219-601
Cow position: chr3:83798043-83797651 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 138

Conread position: 219-603
Cow position: chr3:67520379-67520002 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 36

Conread position: 219-628
Cow position: chr3:67698076-67698475 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 297, 63

Conread position: 220-495
Cow position: chr3:7940758-7940494 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 221-613
Cow position: chr3:14598745-14599103 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 62

Conread position: 223-497
Cow position: chr3:3637988-3638243 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 223-627
Cow position: chr3:38828568-38828949 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 5

Conread position: 224-539
Cow position: chr3:49791011-49790707 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 11

Conread position: 224-614
Cow position: chr3:38035790-38035403 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 65

Conread position: 228-421
Cow position: chr3:61024498-61024312 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 228-423
Cow position: chr3:70631824-70632009 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 228-536
Cow position: chr3:66884135-66883841 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 228-588
Cow position: chr3:53095130-53094769 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 320, 55

Conread position: 228-592
Cow position: chr3:74079833-74079475 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 298, 51

Conread position: 228-595
Cow position: chr3:57273872-57274224 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 235, 54

Conread position: 228-614
Cow position: chr3:53875953-53875577 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 310, 44

Conread position: 229-607
Cow position: chr3:13890274-13890662 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 140

Conread position: 231-602
Cow position: chr3:54506520-54506879 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 14

Conread position: 231-634
Cow position: chr3:1453313-1452932 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 252
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 232-405
Cow position: chr3:27212172-27212337 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 232-518
Cow position: chr3:34669918-34669647 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 233-606
Cow position: chr3:55819558-55819926 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 57

Conread position: 233-608
Cow position: chr3:44837569-44837187 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 12

Conread position: 235-601
Cow position: chr3:19198800-19199159 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 47

Conread position: 236-370
Cow position: chr3:16891112-16891242 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 236-614
Cow position: chr3:75687625-75687251 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 46

Conread position: 237-630
Cow position: chr3:26739603-26739224 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 269, 10

Conread position: 240-602
Cow position: chr3:76922847-76922500 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 241-506
Cow position: chr3:79092576-79092318 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 179, 49

Conread position: 241-514
Cow position: chr3:74502503-74502243 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 241-554
Cow position: chr3:20678016-20677724 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 241-566
Cow position: chr3:15751903-15751577 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 128, 41

Conread position: 241-603
Cow position: chr3:26981883-26982223 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 268, 38

Conread position: 241-603
Cow position: chr3:76268161-76267799 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 16

Conread position: 241-614
Cow position: chr3:54374042-54373673 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 21, 42

Conread position: 241-614
Cow position: chr3:59718661-59719035 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 184, 41

Conread position: 241-625
Cow position: chr3:35153440-35153800 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 241-638
Cow position: chr3:53318222-53318619 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 206, 48

Conread position: 242-608
Cow position: chr3:75853511-75853156 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 243-484
Cow position: chr3:81359292-81359055 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 111

Conread position: 243-614
Cow position: chr3:70762302-70761935 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 39

Conread position: 244-603
Cow position: chr3:36418644-36418313 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 244-629
Cow position: chr3:3913629-3913242 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 255
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 46

Conread position: 245-606
Cow position: chr3:62046485-62046848 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 172, 37

Conread position: 246-625
Cow position: chr3:19792716-19793093 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 36

Conread position: 248-601
Cow position: chr3:58960763-58960421 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 251-611
Cow position: chr3:23920601-23920244 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 28

Conread position: 251-628
Cow position: chr3:32787289-32787659 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 265, 39

Conread position: 256-513
Cow position: chr3:55109781-55109532 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 256-522
Cow position: chr3:30222019-30222281 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 179, 34

Conread position: 256-539
Cow position: chr3:26874424-26874698 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 11

Conread position: 256-600
Cow position: chr3:54100889-54100542 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 272, 16

Conread position: 256-602
Cow position: chr3:48810803-48810465 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 269, 26

Conread position: 256-614
Cow position: chr3:68616491-68616153 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 134, 26

Conread position: 256-630
Cow position: chr3:26489251-26488878 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 34

Conread position: 257-603
Cow position: chr3:48073039-48072712 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 269, 25

Conread position: 258-538
Cow position: chr3:59884237-59883964 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 259-614
Cow position: chr3:45667519-45667158 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 117

Conread position: 260-610
Cow position: chr3:2648678-2648327 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 24

Conread position: 261-524
Cow position: chr3:53508460-53508703 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 240, 21

Conread position: 263-601
Cow position: chr3:21015125-21014784 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 119

Conread position: 263-654
Cow position: chr3:59034874-59035274 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 98

Conread position: 264-615
Cow position: chr3:15153534-15153876 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 18

Conread position: 264-643
Cow position: chr3:77581950-77582322 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 230, 19

Conread position: 265-619
Cow position: chr3:71478434-71478782 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 167, 24

Conread position: 272-594
Cow position: chr3:55434177-55434496 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 236, 18

Conread position: 272-614
Cow position: chr3:81039896-81039560 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 183, 10

Conread position: 273-614
Cow position: chr3:50615418-50615079 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 135, 16

Conread position: 276-625
Cow position: chr3:73237044-73237379 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 276-626
Cow position: chr3:6299321-6299654 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 177, 25

Conread position: 277-592
Cow position: chr3:38783466-38783769 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 12, 109

Conread position: 277-626
Cow position: chr3:59040418-59040765 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 99

Conread position: 279-614
Cow position: chr3:4548868-4549203 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 21, 36

Conread position: 280-603
Cow position: chr3:70334109-70333795 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 166, 10

Conread position: 280-611
Cow position: chr3:15443875-15443544 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 15

Conread position: 281-601
Cow position: chr3:34871424-34871740 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 245, 9

Conread position: 282-592
Cow position: chr3:19793735-19793427 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 48, 73

Conread position: 282-614
Cow position: chr3:24468523-24468199 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 171, 87

Conread position: 282-614
Cow position: chr3:55177895-55177567 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 283-574
Cow position: chr3:73820513-73820217 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 228, 57

Conread position: 283-593
Cow position: chr3:1517657-1517349 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 70

Conread position: 283-601
Cow position: chr3:11200124-11199804 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 258, 86

Conread position: 283-601
Cow position: chr3:54551867-54551538 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 114

Conread position: 283-629
Cow position: chr3:79271866-79271513 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 227

Conread position: 284-471
Cow position: chr3:32184162-32183979 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 284-538
Cow position: chr3:84243910-84243664 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 167, 88

Conread position: 284-539
Cow position: chr3:43726935-43727178 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 221, 29

Conread position: 284-595
Cow position: chr3:47417708-47417405 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 235, 92

Conread position: 284-597
Cow position: chr3:12978758-12978447 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 168, 85

Conread position: 284-600
Cow position: chr3:3889709-3889406 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 129, 55

Conread position: 284-603
Cow position: chr3:48900480-48900156 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 108, 34

Conread position: 285-537
Cow position: chr3:1785383-1785139 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 235, 51

Conread position: 285-603
Cow position: chr3:3883960-3883646 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 285-603
Cow position: chr3:17331585-17331893 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 236, 102

Conread position: 285-611
Cow position: chr3:19585720-19586046 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 100

Conread position: 285-624
Cow position: chr3:46541969-46541655 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 318, 66

Conread position: 285-624
Cow position: chr3:76155846-76156181 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 250, 72

Conread position: 286-603
Cow position: chr3:22221180-22221500 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 286-614
Cow position: chr3:60264856-60264534 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 318, 37

Conread position: 286-616
Cow position: chr3:78093524-78093207 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 233, 77

Conread position: 287-593
Cow position: chr3:79196620-79196927 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 83, 61

Conread position: 287-602
Cow position: chr3:10372140-10372429 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 75

Conread position: 287-603
Cow position: chr3:17235348-17235030 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 241, 26

Conread position: 287-615
Cow position: chr3:48459478-48459142 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 105

Conread position: 287-628
Cow position: chr3:42434472-42434129 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 121, 75

Conread position: 288-519
Cow position: chr3:63177339-63177571 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 86

Conread position: 288-642
Cow position: chr3:74846849-74846513 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 51

Conread position: 289-614
Cow position: chr3:30266834-30266508 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 85

Conread position: 290-538
Cow position: chr3:72504036-72503790 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 20, 85

Conread position: 290-600
Cow position: chr3:17058676-17058376 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 251, 10

Conread position: 290-603
Cow position: chr3:58765215-58764912 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 100

Conread position: 293-539
Cow position: chr3:84175959-84175717 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 206, 81

Conread position: 293-602
Cow position: chr3:13380420-13380105 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 0

Conread position: 294-539
Cow position: chr3:5366638-5366875 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 294-542
Cow position: chr3:22509894-22510133 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 158, 67

Conread position: 294-608
Cow position: chr3:72342112-72342427 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 78

Conread position: 294-614
Cow position: chr3:5696862-5696543 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 231, 67

Conread position: 294-614
Cow position: chr3:18179813-18180150 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 99, 223

Conread position: 295-599
Cow position: chr3:7661721-7662027 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 71

Conread position: 295-628
Cow position: chr3:64526716-64527044 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 220, 66

Conread position: 296-523
Cow position: chr3:83822713-83822496 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 297-601
Cow position: chr3:18144251-18143943 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 76

Conread position: 297-607
Cow position: chr3:35056108-35055798 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 129, 72

Conread position: 297-607
Cow position: chr3:83787307-83787620 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 113, 68

Conread position: 297-626
Cow position: chr3:42796638-42796321 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 53

Conread position: 298-598
Cow position: chr3:73298958-73299234 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 298-608
Cow position: chr3:14194307-14194011 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 196, 9

Conread position: 299-539
Cow position: chr3:53210148-53209913 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 70

Conread position: 299-592
Cow position: chr3:5889573-5889282 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 150, 70

Conread position: 299-614
Cow position: chr3:46146859-46146544 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 128, 34

Conread position: 299-638
Cow position: chr3:56678481-56678144 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 130, 66

Conread position: 300-541
Cow position: chr3:35621176-35621409 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 300-626
Cow position: chr3:58134814-58134487 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 216, 65

Conread position: 303-539
Cow position: chr3:10103924-10104147 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 303-627
Cow position: chr3:48468059-48468371 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 227, 59

Conread position: 304-603
Cow position: chr3:45700684-45700976 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 225, 61

Conread position: 305-601
Cow position: chr3:6403300-6403593 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 243, 71

Conread position: 305-627
Cow position: chr3:22668293-22668610 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 231, 56

Conread position: 306-601
Cow position: chr3:26992446-26992745 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 220, 59

Conread position: 306-607
Cow position: chr3:58527277-58527555 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 307-619
Cow position: chr3:15951031-15950727 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 263, 69

Conread position: 309-603
Cow position: chr3:58318071-58317769 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 214, 0

Conread position: 309-627
Cow position: chr3:3656393-3656712 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 15, 65

Conread position: 311-601
Cow position: chr3:55094350-55094059 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 29, 54

Conread position: 315-599
Cow position: chr3:18059590-18059874 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 125, 37

Conread position: 316-614
Cow position: chr3:33329703-33330019 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 201, 73

Conread position: 316-625
Cow position: chr3:20034256-20033950 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 199, 45

Conread position: 317-598
Cow position: chr3:75238348-75238630 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 224, 52

Conread position: 317-599
Cow position: chr3:73837826-73837548 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 60

Conread position: 318-627
Cow position: chr3:57704214-57704531 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 71

Conread position: 323-598
Cow position: chr3:9116924-9117203 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 191, 37

Conread position: 323-603
Cow position: chr3:3316916-3316634 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 189, 41

Conread position: 323-625
Cow position: chr3:22165521-22165220 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 220, 42

Conread position: 326-537
Cow position: chr3:55983994-55984203 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 63

Conread position: 326-601
Cow position: chr3:59945025-59945299 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 193, 24

Conread position: 326-614
Cow position: chr3:10841713-10842001 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 23

Conread position: 327-600
Cow position: chr3:31361318-31361594 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 43

Conread position: 329-614
Cow position: chr3:4268680-4268388 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 36

Conread position: 330-511
Cow position: chr3:3471941-3472119 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 330-628
Cow position: chr3:79813509-79813814 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 59

Conread position: 331-608
Cow position: chr3:75778157-75777890 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 34

Conread position: 331-624
Cow position: chr3:83988435-83988726 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 121, 45

Conread position: 332-595
Cow position: chr3:5707309-5707044 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 209, 33

Conread position: 336-608
Cow position: chr3:71474499-71474229 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 54

Conread position: 337-606
Cow position: chr3:66631440-66631166 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 167, 25

Conread position: 339-510
Cow position: chr3:81277558-81277390 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 42

Conread position: 339-585
Cow position: chr3:84250632-84250393 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 82, 42

Conread position: 339-600
Cow position: chr3:31350193-31349938 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 339-603
Cow position: chr3:39873785-39873534 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 35

Conread position: 339-614
Cow position: chr3:21867124-21866853 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 13

Conread position: 339-615
Cow position: chr3:75608409-75608674 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 157, 50

Conread position: 339-628
Cow position: chr3:15672248-15671955 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 53

Conread position: 340-593
Cow position: chr3:51609273-51609020 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 182, 29

Conread position: 340-599
Cow position: chr3:23203322-23203059 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 187, 48

Conread position: 340-611
Cow position: chr3:11640641-11640913 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 55

Conread position: 341-521
Cow position: chr3:83928162-83928335 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 21

Conread position: 341-601
Cow position: chr3:64196738-64196997 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 172, 43

Conread position: 341-608
Cow position: chr3:84174215-84174483 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 190, 9

Conread position: 341-628
Cow position: chr3:10591604-10591314 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 43

Conread position: 341-628
Cow position: chr3:54481889-54481604 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 342-625
Cow position: chr3:18001116-18001384 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 21

Conread position: 345-595
Cow position: chr3:1890194-1889940 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 45

Conread position: 345-611
Cow position: chr3:48478114-48477862 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 345-617
Cow position: chr3:63844847-63845131 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 20

Conread position: 346-555
Cow position: chr3:36160276-36160066 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 16

Conread position: 346-599
Cow position: chr3:47316461-47316208 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 160, 23

Conread position: 347-581
Cow position: chr3:27976606-27976370 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 185, 27

Conread position: 347-603
Cow position: chr3:76269817-76270062 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 348-599
Cow position: chr3:10668958-10668709 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 149, 15

Conread position: 350-600
Cow position: chr3:14546924-14547170 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 178, 26

Conread position: 360-614
Cow position: chr3:8182021-8181764 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 10

Conread position: 360-614
Cow position: chr3:33002324-33002570 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 14

Conread position: 364-624
Cow position: chr3:79272639-79272380 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 20

Conread position: 366-628
Cow position: chr3:53428983-53428717 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 7

Conread position: 367-574
Cow position: chr3:68004765-68004559 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 164, 22

Conread position: 369-600
Cow position: chr3:46792325-46792554 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 7

Conread position: 369-603
Cow position: chr3:20841936-20841705 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 219, 154

Conread position: 369-614
Cow position: chr3:35074820-35075057 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 369-628
Cow position: chr3:56949149-56948899 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 372-614
Cow position: chr3:29946327-29946570 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 139

Conread position: 373-603
Cow position: chr3:6182281-6182059 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 69

Conread position: 375-521
Cow position: chr3:41652321-41652465 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 375-607
Cow position: chr3:75173637-75173422 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 76

Conread position: 375-615
Cow position: chr3:9120790-9121027 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 162, 12

Conread position: 376-566
Cow position: chr3:24596478-24596287 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 165, 8

Conread position: 376-601
Cow position: chr3:7581773-7581546 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 160, 109

Conread position: 376-603
Cow position: chr3:31804821-31804596 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 10

Conread position: 376-603
Cow position: chr3:69650943-69650724 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 148, 14

Conread position: 376-607
Cow position: chr3:12090617-12090855 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 149, 97

Conread position: 376-614
Cow position: chr3:67626397-67626172 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 13

Conread position: 376-630
Cow position: chr3:15160463-15160719 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 377-601
Cow position: chr3:40213086-40212863 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 151, 13

Conread position: 377-638
Cow position: chr3:27083104-27082833 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 239

Conread position: 378-603
Cow position: chr3:52845502-52845729 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 36

Conread position: 378-607
Cow position: chr3:69785679-69785442 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 72

Conread position: 388-522
Cow position: chr3:51349779-51349913 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 388-582
Cow position: chr3:33048438-33048239 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 55

Conread position: 388-589
Cow position: chr3:16505519-16505322 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 194, 59

Conread position: 388-594
Cow position: chr3:28903967-28903753 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 38

Conread position: 388-598
Cow position: chr3:1028690-1028477 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 146, 28

Conread position: 388-607
Cow position: chr3:25905093-25904861 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 61

Conread position: 388-614
Cow position: chr3:23132213-23131983 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 135, 0

Conread position: 388-635
Cow position: chr3:38248607-38248864 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 39

Conread position: 388-658
Cow position: chr3:26338071-26337788 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 62

Conread position: 389-595
Cow position: chr3:26603598-26603380 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 389-596
Cow position: chr3:59299531-59299740 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 390-601
Cow position: chr3:7860295-7860078 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 151, 0

Conread position: 390-603
Cow position: chr3:84928061-84928281 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 390-621
Cow position: chr3:73335242-73335470 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 116, 107

Conread position: 390-623
Cow position: chr3:80709909-80709668 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 391-600
Cow position: chr3:52456877-52457080 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 178, 45

Conread position: 391-600
Cow position: chr3:81234348-81234559 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 391-601
Cow position: chr3:54905577-54905778 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 391-603
Cow position: chr3:8349605-8349397 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 5

Conread position: 391-603
Cow position: chr3:15973525-15973744 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 60, 50

Conread position: 391-611
Cow position: chr3:49996764-49996536 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 54

Conread position: 391-611
Cow position: chr3:74644516-74644744 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 36

Conread position: 391-614
Cow position: chr3:2637885-2638118 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 135, 0

Conread position: 391-614
Cow position: chr3:11281725-11281953 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 134, 220

Conread position: 391-615
Cow position: chr3:39912730-39912500 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 107

Conread position: 391-622
Cow position: chr3:39996932-39996701 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 391-622
Cow position: chr3:81923840-81923600 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 148, 48

Conread position: 391-624
Cow position: chr3:82366088-82366323 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 88, 24

Conread position: 392-557
Cow position: chr3:82123588-82123422 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 392-600
Cow position: chr3:44959902-44960116 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 0

Conread position: 392-601
Cow position: chr3:6728370-6728149 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 392-626
Cow position: chr3:4120406-4120175 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 392-634
Cow position: chr3:29334456-29334203 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 393-600
Cow position: chr3:54067758-54067965 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 32

Conread position: 393-611
Cow position: chr3:44961043-44960836 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 393-614
Cow position: chr3:1011447-1011677 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 47

Conread position: 396-537
Cow position: chr3:64373192-64373051 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 396-588
Cow position: chr3:2483968-2484161 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 165, 0

Conread position: 396-600
Cow position: chr3:13241112-13240902 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 37

Conread position: 396-600
Cow position: chr3:41863588-41863793 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 396-601
Cow position: chr3:14770918-14770714 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 140, 0

Conread position: 396-601
Cow position: chr3:83770695-83770906 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 396-603
Cow position: chr3:11229401-11229196 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 205, 175

Conread position: 396-606
Cow position: chr3:14518115-14517904 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 40

Conread position: 396-614
Cow position: chr3:22889053-22888828 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 396-614
Cow position: chr3:53084024-53083798 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 206

Conread position: 396-625
Cow position: chr3:35624581-35624348 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 101

Conread position: 397-601
Cow position: chr3:18248917-18249127 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 397-603
Cow position: chr3:28902794-28902588 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 113

Conread position: 397-603
Cow position: chr3:30357487-30357683 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 164, 64

Conread position: 397-628
Cow position: chr3:18831386-18831620 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 128

Conread position: 398-601
Cow position: chr3:46559749-46559544 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 398-629
Cow position: chr3:22924409-22924181 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 399-628
Cow position: chr3:75107741-75107972 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 48

Conread position: 400-606
Cow position: chr3:5703146-5703353 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 77

Conread position: 401-604
Cow position: chr3:20021238-20021443 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 401-642
Cow position: chr3:49363078-49363318 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 201

Conread position: 403-603
Cow position: chr3:78071821-78071618 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 403-614
Cow position: chr3:59702142-59702359 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 38

Conread position: 404-614
Cow position: chr3:67407394-67407181 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 103

Conread position: 404-615
Cow position: chr3:11027249-11027463 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 19

Conread position: 405-592
Cow position: chr3:40145436-40145630 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 405-601
Cow position: chr3:47199154-47198954 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 154

Conread position: 405-603
Cow position: chr3:81666772-81666971 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 126, 143

Conread position: 409-553
Cow position: chr3:58432468-58432323 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 409-575
Cow position: chr3:19788853-19788685 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 98

Conread position: 409-611
Cow position: chr3:44724838-44725050 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 25

Conread position: 409-628
Cow position: chr3:82195463-82195685 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 129, 77

Conread position: 410-589
Cow position: chr3:84807350-84807166 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 168

Conread position: 410-601
Cow position: chr3:79339601-79339404 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 33

Conread position: 410-603
Cow position: chr3:12669114-12669313 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 33

Conread position: 410-633
Cow position: chr3:76056307-76056087 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 195, 0

Conread position: 410-648
Cow position: chr3:51150106-51150347 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 33

Conread position: 411-611
Cow position: chr3:80023330-80023132 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 114, 32

Conread position: 411-614
Cow position: chr3:985993-986200 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 42, 31

Conread position: 411-614
Cow position: chr3:58101658-58101860 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 66

Conread position: 411-616
Cow position: chr3:61024044-61023832 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 0

Conread position: 413-600
Cow position: chr3:54557655-54557837 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 416-595
Cow position: chr3:62312780-62312964 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 42

Conread position: 416-595
Cow position: chr3:62370039-62370223 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 42

Conread position: 416-601
Cow position: chr3:84137831-84137642 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 416-603
Cow position: chr3:75966797-75966608 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 31

Conread position: 416-604
Cow position: chr3:31793900-31793706 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 27

Conread position: 416-606
Cow position: chr3:4271356-4271542 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 416-614
Cow position: chr3:48483162-48483362 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 161

Conread position: 416-614
Cow position: chr3:53604762-53604559 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 416-623
Cow position: chr3:25735922-25735710 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 195

Conread position: 417-598
Cow position: chr3:77171300-77171487 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 26

Conread position: 417-614
Cow position: chr3:43389143-43388940 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 417-614
Cow position: chr3:84154400-84154590 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 27

Conread position: 417-628
Cow position: chr3:27286503-27286716 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 191, 0

Conread position: 417-633
Cow position: chr3:12178041-12178268 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 417-639
Cow position: chr3:59317687-59317908 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 103, 69

Conread position: 419-599
Cow position: chr3:63860624-63860440 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 419-611
Cow position: chr3:70431418-70431611 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 7

Conread position: 419-614
Cow position: chr3:59268358-59268562 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 24

Conread position: 421-611
Cow position: chr3:78258766-78258568 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 422-614
Cow position: chr3:77665562-77665366 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 43

Conread position: 427-611
Cow position: chr3:22868725-22868533 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 86

Conread position: 435-611
Cow position: chr3:18471304-18471485 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 438-603
Cow position: chr3:2636954-2637119 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 68

Conread position: 443-595
Cow position: chr3:69205028-69205182 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 132

Conread position: 443-626
Cow position: chr3:69849283-69849100 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 75

Conread position: 446-598
Cow position: chr3:57706743-57706582 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 446-603
Cow position: chr3:48537376-48537540 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 446-603
Cow position: chr3:79105569-79105406 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 446-608
Cow position: chr3:635191-635357 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 131

Conread position: 449-596
Cow position: chr3:53552963-53552817 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 449-601
Cow position: chr3:82175524-82175681 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 31

Conread position: 449-603
Cow position: chr3:23037492-23037334 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 43

Conread position: 449-603
Cow position: chr3:58929518-58929358 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 449-605
Cow position: chr3:77653944-77654096 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 449-609
Cow position: chr3:57790630-57790787 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 449-610
Cow position: chr3:59271848-59272011 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 16

Conread position: 449-614
Cow position: chr3:19044749-19044584 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 22

Conread position: 449-614
Cow position: chr3:77098806-77098639 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 449-615
Cow position: chr3:61680334-61680503 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 18

Conread position: 449-624
Cow position: chr3:42589115-42589294 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 129

Conread position: 449-632
Cow position: chr3:49787575-49787761 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 449-633
Cow position: chr3:76300788-76300976 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 164

Conread position: 449-635
Cow position: chr3:44534519-44534327 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 449-637
Cow position: chr3:24774670-24774852 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 51

Conread position: 450-577
Cow position: chr3:17039630-17039765 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 450-590
Cow position: chr3:5003651-5003793 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 450-592
Cow position: chr3:2903155-2903022 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 450-593
Cow position: chr3:72255401-72255254 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 91, 36

Conread position: 450-595
Cow position: chr3:28884143-28883996 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 37

Conread position: 450-595
Cow position: chr3:83199529-83199679 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 68

Conread position: 450-598
Cow position: chr3:67942518-67942364 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 450-598
Cow position: chr3:70756624-70756470 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 450-599
Cow position: chr3:63069348-63069191 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 450-599
Cow position: chr3:83705520-83705365 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 450-601
Cow position: chr3:32376831-32376984 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 108

Conread position: 450-601
Cow position: chr3:41366692-41366528 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 450-601
Cow position: chr3:46259728-46259884 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 66

Conread position: 450-601
Cow position: chr3:59699633-59699479 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 450-603
Cow position: chr3:23753509-23753658 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 450-603
Cow position: chr3:23804523-23804676 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 124

Conread position: 450-603
Cow position: chr3:62186169-62186332 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 450-603
Cow position: chr3:80910613-80910771 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 450-604
Cow position: chr3:74515320-74515161 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 450-606
Cow position: chr3:59681886-59681730 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 450-607
Cow position: chr3:35802923-35802758 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 450-607
Cow position: chr3:55730451-55730288 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 450-608
Cow position: chr3:3011164-3011324 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 123

Conread position: 450-608
Cow position: chr3:64910078-64909916 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 450-610
Cow position: chr3:55106131-55105965 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 450-611
Cow position: chr3:29234663-29234497 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 135

Conread position: 450-613
Cow position: chr3:8147508-8147339 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 450-614
Cow position: chr3:21694242-21694412 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 107

Conread position: 450-614
Cow position: chr3:72027655-72027823 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 9

Conread position: 450-615
Cow position: chr3:3453597-3453768 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 450-623
Cow position: chr3:2016453-2016625 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 0

Conread position: 450-625
Cow position: chr3:7381815-7381639 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 106

Conread position: 450-627
Cow position: chr3:68624235-68624420 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 450-629
Cow position: chr3:18700093-18699910 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 163

Conread position: 450-631
Cow position: chr3:70402662-70402840 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 450-635
Cow position: chr3:79398160-79398348 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 163

Conread position: 450-637
Cow position: chr3:83934743-83934932 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 450-660
Cow position: chr3:58614474-58614697 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 166

Conread position: 451-603
Cow position: chr3:59947684-59947842 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 451-603
Cow position: chr3:73701526-73701672 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 451-603
Cow position: chr3:80958492-80958335 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 8

Conread position: 451-607
Cow position: chr3:15859360-15859203 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 152, 0

Conread position: 451-607
Cow position: chr3:18479279-18479118 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 32

Conread position: 451-607
Cow position: chr3:83889265-83889427 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 451-608
Cow position: chr3:37641345-37641505 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 451-612
Cow position: chr3:621453-621624 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 451-614
Cow position: chr3:4071752-4071583 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 32

Conread position: 451-614
Cow position: chr3:16362486-16362330 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 451-614
Cow position: chr3:16710781-16710611 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 451-614
Cow position: chr3:24220559-24220393 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 89, 40

Conread position: 451-614
Cow position: chr3:48300442-48300274 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 128

Conread position: 451-614
Cow position: chr3:62789936-62789764 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 451-614
Cow position: chr3:64800531-64800361 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 451-614
Cow position: chr3:79893479-79893309 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 451-615
Cow position: chr3:9718233-9718062 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 451-615
Cow position: chr3:80173018-80173185 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 56

Conread position: 451-617
Cow position: chr3:20911391-20911218 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 126

Conread position: 451-625
Cow position: chr3:32248030-32248209 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 150

Conread position: 451-628
Cow position: chr3:16107348-16107172 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 74

Conread position: 451-633
Cow position: chr3:15955540-15955728 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 452-600
Cow position: chr3:4518163-4518013 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 452-600
Cow position: chr3:40958107-40957957 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 452-603
Cow position: chr3:5737771-5737918 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 23

Conread position: 452-603
Cow position: chr3:8523134-8522980 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 54

Conread position: 452-603
Cow position: chr3:43896040-43895889 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 452-603
Cow position: chr3:82425059-82424907 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 55

Conread position: 452-609
Cow position: chr3:26393280-26393120 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 157

Conread position: 452-614
Cow position: chr3:26977554-26977721 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 130

Conread position: 452-614
Cow position: chr3:31115250-31115090 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 156, 63

Conread position: 452-614
Cow position: chr3:43016431-43016255 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 452-623
Cow position: chr3:74050682-74050509 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 152, 88

Conread position: 452-629
Cow position: chr3:19611332-19611150 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 452-632
Cow position: chr3:81401077-81400906 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 171, 27

Conread position: 453-577
Cow position: chr3:73162370-73162248 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 453-614
Cow position: chr3:18764122-18764290 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 453-628
Cow position: chr3:22078096-22078277 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 454-599
Cow position: chr3:45743932-45744080 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 17

Conread position: 454-614
Cow position: chr3:76168610-76168443 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 456-598
Cow position: chr3:57757431-57757575 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 118

Conread position: 456-600
Cow position: chr3:43527760-43527623 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 456-603
Cow position: chr3:73925014-73924866 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 61

Conread position: 456-614
Cow position: chr3:44218789-44218952 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 155

Conread position: 456-620
Cow position: chr3:20066126-20065955 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 456-630
Cow position: chr3:14211959-14211785 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 457-600
Cow position: chr3:22903728-22903587 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 457-601
Cow position: chr3:59885564-59885703 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 457-603
Cow position: chr3:75907936-75908085 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 457-626
Cow position: chr3:37851522-37851691 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 93

Conread position: 457-633
Cow position: chr3:81616428-81616245 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 458-602
Cow position: chr3:56943900-56943757 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 459-601
Cow position: chr3:11607849-11607989 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 459-601
Cow position: chr3:58010804-58010662 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 119

Conread position: 459-614
Cow position: chr3:54350414-54350249 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 459-631
Cow position: chr3:30682999-30682828 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 146, 0

Conread position: 460-615
Cow position: chr3:60371010-60371170 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 107

Conread position: 461-612
Cow position: chr3:5821424-5821267 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 462-601
Cow position: chr3:78115563-78115418 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 462-663
Cow position: chr3:8540537-8540735 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 49

Conread position: 464-609
Cow position: chr3:29943888-29944040 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 464-620
Cow position: chr3:3275631-3275786 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 465-613
Cow position: chr3:26792495-26792639 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 51

Conread position: 465-614
Cow position: chr3:24370434-24370578 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 62

Conread position: 465-634
Cow position: chr3:53836674-53836504 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 138, 0

Conread position: 467-603
Cow position: chr3:20996962-20996828 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 468-614
Cow position: chr3:3584383-3584527 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 132, 30

Conread position: 471-614
Cow position: chr3:34392182-34392041 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 474-601
Cow position: chr3:55973036-55972911 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 479-614
Cow position: chr3:41826286-41826152 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 481-627
Cow position: chr3:14000502-14000357 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 122, 90

Show alignments to all cow chromosomes.