Cow genome map

Conread name: Spl1-SPL010026C06

Conread position: 1-303
Cow position: chr6:20747310-20747592 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 215, 33

Conread position: 1-490
Cow position: chr6:28811354-28810876 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 269

Conread position: 1-539
Cow position: chr6:54867159-54867688 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 2-371
Cow position: chr6:33852141-33851789 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 124, 170

Conread position: 2-382
Cow position: chr6:16675468-16675820 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 107

Conread position: 3-531
Cow position: chr6:47339715-47339193 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 246

Conread position: 5-603
Cow position: chr6:44078160-44078753 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 55

Conread position: 6-585
Cow position: chr6:28482663-28483237 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 14

Conread position: 7-307
Cow position: chr6:48468446-48468756 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 113

Conread position: 14-305
Cow position: chr6:2088316-2088609 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 27

Conread position: 14-337
Cow position: chr6:9375717-9375394 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 82

Conread position: 14-405
Cow position: chr6:22877500-22877119 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 14-590
Cow position: chr6:51835057-51835623 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 30

Conread position: 15-385
Cow position: chr6:23987081-23986726 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 18

Conread position: 19-591
Cow position: chr6:21587762-21587208 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 268

Conread position: 21-630
Cow position: chr6:18447848-18447250 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 150

Conread position: 22-435
Cow position: chr6:28148506-28148902 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 22-614
Cow position: chr6:26728865-26728294 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 149

Conread position: 23-429
Cow position: chr6:62925330-62924937 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 23-628
Cow position: chr6:10332443-10331834 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 262

Conread position: 24-413
Cow position: chr6:9733167-9732794 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 66

Conread position: 24-437
Cow position: chr6:49411015-49410628 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 99, 63

Conread position: 24-603
Cow position: chr6:29210166-29210715 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 25-147
Cow position: chr6:6459924-6460047 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 25-171
Cow position: chr6:31739210-31739363 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 25-238
Cow position: chr6:50527324-50527534 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 98, 133

Conread position: 25-251
Cow position: chr6:10682408-10682639 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 156

Conread position: 25-252
Cow position: chr6:33509246-33509474 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 101, 56

Conread position: 25-280
Cow position: chr6:11789067-11789322 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 101, 248

Conread position: 25-281
Cow position: chr6:37331629-37331883 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 94

Conread position: 25-314
Cow position: chr6:39998666-39998375 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 49

Conread position: 25-318
Cow position: chr6:12844975-12845267 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 147

Conread position: 25-334
Cow position: chr6:52002035-52002340 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 25-337
Cow position: chr6:46666772-46667086 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 25-345
Cow position: chr6:53345461-53345779 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 254

Conread position: 25-347
Cow position: chr6:21312090-21311764 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 100

Conread position: 25-353
Cow position: chr6:55538458-55538132 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 51

Conread position: 25-354
Cow position: chr6:20451772-20452097 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 51

Conread position: 25-357
Cow position: chr6:13741363-13741697 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 89

Conread position: 25-366
Cow position: chr6:48169610-48169948 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 200

Conread position: 25-366
Cow position: chr6:61575262-61575612 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 25-367
Cow position: chr6:24327470-24327137 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 152

Conread position: 25-367
Cow position: chr6:66431510-66431826 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 183

Conread position: 25-381
Cow position: chr6:46205683-46206032 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 51

Conread position: 25-421
Cow position: chr6:6614100-6614490 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 122

Conread position: 25-421
Cow position: chr6:16737686-16738072 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 146

Conread position: 25-422
Cow position: chr6:66304174-66303786 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 14

Conread position: 25-423
Cow position: chr6:3978996-3978609 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 101

Conread position: 25-434
Cow position: chr6:5672895-5673313 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 64

Conread position: 25-437
Cow position: chr6:34075692-34076099 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 100

Conread position: 25-481
Cow position: chr6:54140484-54140910 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 21

Conread position: 25-495
Cow position: chr6:31636022-31635557 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 111

Conread position: 25-496
Cow position: chr6:16625613-16626077 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 306
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 101, 145

Conread position: 25-496
Cow position: chr6:19427115-19427578 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 181

Conread position: 25-497
Cow position: chr6:34842894-34842427 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 49

Conread position: 25-497
Cow position: chr6:55040552-55040085 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 263

Conread position: 25-512
Cow position: chr6:14958677-14958196 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 41

Conread position: 25-513
Cow position: chr6:12550933-12551415 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 25-539
Cow position: chr6:46570791-46571277 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 14

Conread position: 25-542
Cow position: chr6:66532137-66531646 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 146

Conread position: 25-574
Cow position: chr6:67187362-67187890 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 76

Conread position: 25-587
Cow position: chr6:35842326-35842882 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 131

Conread position: 25-590
Cow position: chr6:54647860-54647274 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 208

Conread position: 25-592
Cow position: chr6:15305254-15305798 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 95

Conread position: 25-598
Cow position: chr6:39358670-39358110 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 36

Conread position: 25-599
Cow position: chr6:29484777-29485317 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 85

Conread position: 25-599
Cow position: chr6:49398952-49398395 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 261

Conread position: 25-600
Cow position: chr6:13366963-13367517 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 25-600
Cow position: chr6:24031040-24031598 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 25-600
Cow position: chr6:61269000-61269552 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 99

Conread position: 25-601
Cow position: chr6:40031858-40032415 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 146

Conread position: 25-603
Cow position: chr6:8636940-8637520 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 267

Conread position: 25-603
Cow position: chr6:16765727-16765160 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 209

Conread position: 25-603
Cow position: chr6:32287285-32287869 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 146

Conread position: 25-603
Cow position: chr6:61631948-61631370 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 25-603
Cow position: chr6:65870690-65871269 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 43

Conread position: 25-608
Cow position: chr6:17557040-17557618 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 25-610
Cow position: chr6:10106335-10105738 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 254

Conread position: 25-611
Cow position: chr6:2607279-2607855 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 260

Conread position: 25-613
Cow position: chr6:6068023-6067460 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 228

Conread position: 25-614
Cow position: chr6:18080850-18080268 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 265

Conread position: 25-614
Cow position: chr6:32867541-32866973 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 255

Conread position: 25-614
Cow position: chr6:45690944-45690370 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 161

Conread position: 25-614
Cow position: chr6:52431368-52430768 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 263

Conread position: 25-615
Cow position: chr6:2546909-2547512 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 25-619
Cow position: chr6:323645-323047 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 267

Conread position: 25-624
Cow position: chr6:10612528-10613088 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 78

Conread position: 25-625
Cow position: chr6:35725757-35726350 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 134

Conread position: 25-625
Cow position: chr6:67430224-67429602 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 397
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 104, 262

Conread position: 25-628
Cow position: chr6:53178304-53178888 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 147

Conread position: 25-633
Cow position: chr6:52478777-52478144 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 262

Conread position: 25-677
Cow position: chr6:17414788-17414135 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 200

Conread position: 26-162
Cow position: chr6:31927716-31927850 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 61

Conread position: 26-183
Cow position: chr6:30159509-30159667 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 97, 146

Conread position: 26-225
Cow position: chr6:42420932-42421127 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 134

Conread position: 26-243
Cow position: chr6:52216089-52215871 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 149

Conread position: 26-245
Cow position: chr6:32854593-32854384 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 26-262
Cow position: chr6:56501978-56502212 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 26-277
Cow position: chr6:7801697-7801447 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 28

Conread position: 26-286
Cow position: chr6:12515822-12516076 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 22

Conread position: 26-334
Cow position: chr6:55608140-55607841 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 230

Conread position: 26-344
Cow position: chr6:6596255-6596562 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 87

Conread position: 26-347
Cow position: chr6:25358743-25359058 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 50

Conread position: 26-358
Cow position: chr6:52556805-52556480 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 99

Conread position: 26-360
Cow position: chr6:1174835-1174488 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 115

Conread position: 26-361
Cow position: chr6:48807322-48806997 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 143, 56

Conread position: 26-366
Cow position: chr6:28476843-28477182 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 208

Conread position: 26-367
Cow position: chr6:54806889-54807232 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 285

Conread position: 26-367
Cow position: chr6:58075894-58076232 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 99

Conread position: 26-368
Cow position: chr6:41824162-41823816 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 260

Conread position: 26-370
Cow position: chr6:10695526-10695874 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 33

Conread position: 26-371
Cow position: chr6:32916254-32915916 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 215

Conread position: 26-378
Cow position: chr6:14839360-14839011 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-382
Cow position: chr6:29077395-29077747 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 70

Conread position: 26-385
Cow position: chr6:8318499-8318141 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 285

Conread position: 26-392
Cow position: chr6:12387654-12387298 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 115

Conread position: 26-405
Cow position: chr6:60456497-60456866 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 215

Conread position: 26-421
Cow position: chr6:5958349-5957975 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 61

Conread position: 26-422
Cow position: chr6:47540191-47540585 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 259

Conread position: 26-429
Cow position: chr6:606928-607322 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 261

Conread position: 26-436
Cow position: chr6:36928319-36928729 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 143

Conread position: 26-468
Cow position: chr6:46292664-46292248 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 133

Conread position: 26-486
Cow position: chr6:456847-457293 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 44

Conread position: 26-490
Cow position: chr6:60673214-60673687 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 133

Conread position: 26-495
Cow position: chr6:58073709-58074175 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 201

Conread position: 26-513
Cow position: chr6:37634457-37634940 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 26-524
Cow position: chr6:9751379-9750901 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 235

Conread position: 26-524
Cow position: chr6:42565352-42565843 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 164

Conread position: 26-526
Cow position: chr6:1886981-1886508 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 107

Conread position: 26-526
Cow position: chr6:24004213-24004693 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 151

Conread position: 26-526
Cow position: chr6:63047243-63047750 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 58

Conread position: 26-528
Cow position: chr6:55474916-55475415 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 134

Conread position: 26-531
Cow position: chr6:18049359-18048859 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 26-535
Cow position: chr6:5302733-5302254 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 26-538
Cow position: chr6:67214408-67214917 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 26-539
Cow position: chr6:25407739-25407221 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 6

Conread position: 26-542
Cow position: chr6:6343094-6343603 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 69

Conread position: 26-544
Cow position: chr6:36652096-36652599 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 72

Conread position: 26-574
Cow position: chr6:40774704-40774125 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 234

Conread position: 26-590
Cow position: chr6:47304994-47305567 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 129

Conread position: 26-595
Cow position: chr6:39093428-39093975 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 131

Conread position: 26-596
Cow position: chr6:35990560-35990007 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 26-599
Cow position: chr6:1770528-1769960 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 26

Conread position: 26-601
Cow position: chr6:4468426-4469002 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 100

Conread position: 26-601
Cow position: chr6:8804877-8804307 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 73

Conread position: 26-603
Cow position: chr6:17090259-17090818 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 113

Conread position: 26-603
Cow position: chr6:21004322-21004918 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 128

Conread position: 26-605
Cow position: chr6:45596858-45596307 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 370
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 87

Conread position: 26-607
Cow position: chr6:12927789-12928382 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 84

Conread position: 26-607
Cow position: chr6:33302077-33302638 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 74

Conread position: 26-608
Cow position: chr6:16616868-16617426 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 366
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 69

Conread position: 26-610
Cow position: chr6:32125733-32126297 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 259

Conread position: 26-615
Cow position: chr6:6060891-6060322 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 215

Conread position: 26-615
Cow position: chr6:23695664-23696245 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 26-633
Cow position: chr6:53933183-53932576 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 156

Conread position: 27-172
Cow position: chr6:37148489-37148634 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 117

Conread position: 27-316
Cow position: chr6:10649351-10649071 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 154

Conread position: 27-371
Cow position: chr6:12629681-12630032 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 154

Conread position: 27-371
Cow position: chr6:44098755-44099096 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 99

Conread position: 27-382
Cow position: chr6:34549076-34549418 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 146

Conread position: 27-429
Cow position: chr6:50120119-50119721 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 27-437
Cow position: chr6:18961853-18961446 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 65

Conread position: 27-512
Cow position: chr6:4864871-4864403 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 138

Conread position: 27-531
Cow position: chr6:35103657-35103165 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 27-539
Cow position: chr6:51674577-51675079 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 221

Conread position: 27-599
Cow position: chr6:43345788-43345206 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 107

Conread position: 27-600
Cow position: chr6:36195881-36196437 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 256

Conread position: 27-602
Cow position: chr6:46465495-46466055 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 214

Conread position: 27-606
Cow position: chr6:18987886-18988433 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 19

Conread position: 27-624
Cow position: chr6:444993-445587 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 107

Conread position: 27-628
Cow position: chr6:8562382-8562977 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 251

Conread position: 27-642
Cow position: chr6:24781897-24781278 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 28-280
Cow position: chr6:38988005-38987754 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 28-429
Cow position: chr6:16410864-16411252 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 142

Conread position: 28-521
Cow position: chr6:11169376-11169855 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 144

Conread position: 28-601
Cow position: chr6:10176630-10176063 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 97

Conread position: 29-172
Cow position: chr6:19712430-19712287 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 71

Conread position: 30-348
Cow position: chr6:1784095-1783792 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 87

Conread position: 30-601
Cow position: chr6:66363574-66362996 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 243

Conread position: 33-435
Cow position: chr6:5445321-5445690 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 75

Conread position: 33-505
Cow position: chr6:10459411-10459879 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 51

Conread position: 34-367
Cow position: chr6:50446085-50445756 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 136

Conread position: 34-475
Cow position: chr6:6642914-6642501 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 136

Conread position: 37-631
Cow position: chr6:35181575-35180990 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 70

Conread position: 37-648
Cow position: chr6:5095877-5095259 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 207

Conread position: 38-177
Cow position: chr6:21302297-21302434 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 40-476
Cow position: chr6:561300-561735 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 89

Conread position: 41-526
Cow position: chr6:19681835-19681367 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 92

Conread position: 41-603
Cow position: chr6:32121592-32122133 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 239

Conread position: 43-372
Cow position: chr6:20231142-20230819 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 146

Conread position: 43-601
Cow position: chr6:60859620-60859062 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 82

Conread position: 43-614
Cow position: chr6:16699945-16700504 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 82

Conread position: 43-627
Cow position: chr6:64431625-64432197 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 82

Conread position: 46-288
Cow position: chr6:65261019-65260777 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 190, 171

Conread position: 46-598
Cow position: chr6:12337671-12338223 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 124

Conread position: 49-268
Cow position: chr6:32858586-32858809 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 47

Conread position: 49-366
Cow position: chr6:2012708-2013022 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 234

Conread position: 49-603
Cow position: chr6:46557747-46558292 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 108

Conread position: 49-632
Cow position: chr6:48567653-48567097 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 192

Conread position: 51-602
Cow position: chr6:38770990-38771508 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 52-603
Cow position: chr6:611260-611782 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 9

Conread position: 53-320
Cow position: chr6:28559113-28559381 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 196, 18

Conread position: 58-269
Cow position: chr6:16492216-16492006 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 185, 53

Conread position: 58-366
Cow position: chr6:32210931-32210625 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 58-378
Cow position: chr6:12500555-12500873 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 207

Conread position: 58-512
Cow position: chr6:31525750-31526190 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 67

Conread position: 59-607
Cow position: chr6:9008908-9008378 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 63-507
Cow position: chr6:63272914-63272473 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 111

Conread position: 63-600
Cow position: chr6:15938161-15937617 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 145

Conread position: 65-559
Cow position: chr6:21590423-21590899 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 68

Conread position: 67-523
Cow position: chr6:38218372-38218821 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 67-624
Cow position: chr6:13688104-13687558 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 175

Conread position: 71-342
Cow position: chr6:19508720-19508461 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 100

Conread position: 71-437
Cow position: chr6:38233694-38234028 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 65

Conread position: 71-539
Cow position: chr6:7131160-7130707 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 166

Conread position: 71-599
Cow position: chr6:34196437-34195928 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 165

Conread position: 71-600
Cow position: chr6:47519762-47520289 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 90

Conread position: 72-398
Cow position: chr6:15046382-15046046 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 20

Conread position: 72-496
Cow position: chr6:54369184-54368776 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 73-366
Cow position: chr6:642864-642562 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 287

Conread position: 73-628
Cow position: chr6:6201161-6201696 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 43

Conread position: 76-491
Cow position: chr6:57164143-57164552 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 107

Conread position: 76-531
Cow position: chr6:60057949-60057496 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 227

Conread position: 76-603
Cow position: chr6:28147967-28148502 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 78-615
Cow position: chr6:22332680-22332145 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 221

Conread position: 78-628
Cow position: chr6:48281713-48282255 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 214

Conread position: 80-334
Cow position: chr6:21534779-21535027 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 80-381
Cow position: chr6:69500050-69500342 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 127

Conread position: 83-648
Cow position: chr6:6264369-6264931 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 47

Conread position: 89-429
Cow position: chr6:47150508-47150853 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 293

Conread position: 89-524
Cow position: chr6:42961638-42961207 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 206

Conread position: 89-628
Cow position: chr6:54365594-54365062 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 89-628
Cow position: chr6:60473863-60474404 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 203

Conread position: 89-635
Cow position: chr6:50746706-50747271 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 91-601
Cow position: chr6:35471795-35471277 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 199

Conread position: 92-513
Cow position: chr6:60350565-60350147 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 93-363
Cow position: chr6:40264464-40264200 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 143

Conread position: 93-434
Cow position: chr6:52248404-52248066 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 51

Conread position: 94-601
Cow position: chr6:61113484-61114001 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 201

Conread position: 95-310
Cow position: chr6:35769747-35769535 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 185

Conread position: 95-559
Cow position: chr6:40713763-40713315 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 96-366
Cow position: chr6:65904531-65904270 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 48, 35

Conread position: 96-600
Cow position: chr6:65903880-65903391 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 98-371
Cow position: chr6:54293849-54294116 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 143

Conread position: 98-600
Cow position: chr6:61515459-61514963 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 62

Conread position: 99-603
Cow position: chr6:49422043-49421558 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 347
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 27, 77

Conread position: 101-358
Cow position: chr6:64449133-64449387 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 96

Conread position: 103-418
Cow position: chr6:32335563-32335851 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 104-421
Cow position: chr6:2423493-2423798 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 97

Conread position: 105-650
Cow position: chr6:3952270-3952804 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 69

Conread position: 106-325
Cow position: chr6:17068074-17067856 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 112-386
Cow position: chr6:53710868-53711135 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 112-592
Cow position: chr6:54132571-54133038 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 116

Conread position: 112-600
Cow position: chr6:31535820-31535338 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 112-603
Cow position: chr6:15242588-15243077 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 113-603
Cow position: chr6:56849771-56850255 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 124

Conread position: 115-267
Cow position: chr6:17549087-17549233 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 56

Conread position: 115-319
Cow position: chr6:1002479-1002277 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 39

Conread position: 115-600
Cow position: chr6:38853903-38853421 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 172

Conread position: 116-614
Cow position: chr6:50090397-50090894 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 178

Conread position: 117-385
Cow position: chr6:3374812-3374543 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 54

Conread position: 117-524
Cow position: chr6:54991235-54990845 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 53

Conread position: 119-539
Cow position: chr6:9736879-9736490 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 91, 51

Conread position: 119-575
Cow position: chr6:26915090-26915538 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 134

Conread position: 119-593
Cow position: chr6:41375513-41375998 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 119-633
Cow position: chr6:7103475-7102970 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 120-349
Cow position: chr6:24631330-24631104 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 64

Conread position: 121-603
Cow position: chr6:13040214-13040691 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 166

Conread position: 122-495
Cow position: chr6:27110353-27110724 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 49

Conread position: 122-563
Cow position: chr6:20098201-20097764 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 160

Conread position: 122-614
Cow position: chr6:34251512-34251047 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 37

Conread position: 123-484
Cow position: chr6:130400-130047 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 46

Conread position: 124-607
Cow position: chr6:54430583-54431079 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 164

Conread position: 125-361
Cow position: chr6:39994695-39994463 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 161

Conread position: 125-377
Cow position: chr6:1891079-1890831 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 44

Conread position: 126-334
Cow position: chr6:61978414-61978203 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 154

Conread position: 126-421
Cow position: chr6:54885146-54884852 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 164

Conread position: 127-614
Cow position: chr6:50983976-50984470 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 173

Conread position: 128-598
Cow position: chr6:7190351-7189898 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 140

Conread position: 128-614
Cow position: chr6:29239712-29240181 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 110

Conread position: 128-624
Cow position: chr6:34475774-34475299 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 42

Conread position: 130-437
Cow position: chr6:21542091-21542392 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 130-603
Cow position: chr6:46860397-46859933 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 31

Conread position: 131-280
Cow position: chr6:18977396-18977548 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 131-363
Cow position: chr6:30826262-30826032 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 112, 37

Conread position: 131-370
Cow position: chr6:56041850-56041618 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 182, 119

Conread position: 131-371
Cow position: chr6:10635949-10636182 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 190, 38

Conread position: 131-378
Cow position: chr6:28080130-28079883 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 114

Conread position: 131-380
Cow position: chr6:14850937-14850698 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 131-420
Cow position: chr6:52025883-52025598 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 131-423
Cow position: chr6:49685357-49685640 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 131-524
Cow position: chr6:28977259-28976884 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 119

Conread position: 131-600
Cow position: chr6:31564561-31564117 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 317
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 26

Conread position: 131-600
Cow position: chr6:37148969-37149417 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 131-601
Cow position: chr6:66433720-66434190 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 119

Conread position: 131-603
Cow position: chr6:15301045-15300602 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 110

Conread position: 131-603
Cow position: chr6:45065234-45064797 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 308
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 69, 93

Conread position: 131-603
Cow position: chr6:51581487-51581017 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 153

Conread position: 131-603
Cow position: chr6:54490968-54490508 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 108

Conread position: 131-608
Cow position: chr6:38440954-38441423 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 139

Conread position: 131-614
Cow position: chr6:14949709-14949240 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 150

Conread position: 131-616
Cow position: chr6:53460799-53460321 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 42

Conread position: 131-634
Cow position: chr6:19401634-19402111 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 132-268
Cow position: chr6:41678344-41678479 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 132-360
Cow position: chr6:48573109-48572886 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 28

Conread position: 132-504
Cow position: chr6:63286737-63286369 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 151

Conread position: 132-520
Cow position: chr6:66874135-66874501 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 132-520
Cow position: chr6:68049209-68049569 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 132-601
Cow position: chr6:44194772-44194320 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 103

Conread position: 132-603
Cow position: chr6:24468619-24468161 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 68

Conread position: 132-605
Cow position: chr6:4383266-4383714 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 133-319
Cow position: chr6:59302052-59301864 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 158
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 154

Conread position: 134-334
Cow position: chr6:59015787-59015587 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 128

Conread position: 134-438
Cow position: chr6:60239613-60239325 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 108, 25

Conread position: 134-496
Cow position: chr6:32420910-32421275 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 232
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 159

Conread position: 134-524
Cow position: chr6:46865824-46865436 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 231

Conread position: 134-539
Cow position: chr6:20605709-20606130 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 35

Conread position: 134-602
Cow position: chr6:67950734-67951194 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 106

Conread position: 134-614
Cow position: chr6:16103427-16102940 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 96

Conread position: 135-315
Cow position: chr6:51398577-51398754 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 146, 0

Conread position: 135-369
Cow position: chr6:66453578-66453805 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 9

Conread position: 135-371
Cow position: chr6:45160515-45160286 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 135-372
Cow position: chr6:388947-389183 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 65

Conread position: 135-382
Cow position: chr6:7824539-7824782 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 118, 28

Conread position: 135-625
Cow position: chr6:6063503-6063032 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 105

Conread position: 136-421
Cow position: chr6:25773604-25773332 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 104, 0

Conread position: 136-477
Cow position: chr6:3929098-3929427 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 136-495
Cow position: chr6:49002947-49002613 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 136-592
Cow position: chr6:41733404-41733862 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 104

Conread position: 136-614
Cow position: chr6:35539722-35539248 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 323
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 124, 56

Conread position: 137-504
Cow position: chr6:38614602-38614949 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 103

Conread position: 137-600
Cow position: chr6:38207717-38207250 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 138-320
Cow position: chr6:36011472-36011647 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 9

Conread position: 138-360
Cow position: chr6:22968853-22969078 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 174

Conread position: 138-371
Cow position: chr6:30786369-30786147 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 138-381
Cow position: chr6:55936197-55935962 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 168, 122

Conread position: 138-497
Cow position: chr6:23248184-23247837 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 149

Conread position: 138-514
Cow position: chr6:51893734-51893354 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 153

Conread position: 138-575
Cow position: chr6:21737105-21736692 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 15, 87

Conread position: 138-601
Cow position: chr6:7539352-7539809 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 136

Conread position: 139-344
Cow position: chr6:55366543-55366335 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 172

Conread position: 139-346
Cow position: chr6:7694573-7694365 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 101, 31

Conread position: 139-529
Cow position: chr6:21110749-21111112 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 112

Conread position: 139-603
Cow position: chr6:55282509-55282054 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 140-280
Cow position: chr6:10225895-10225762 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 140-349
Cow position: chr6:9026298-9026504 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 165, 0

Conread position: 140-371
Cow position: chr6:1907320-1907549 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 148

Conread position: 140-378
Cow position: chr6:5462267-5462045 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 140-495
Cow position: chr6:899503-899166 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 313, 48

Conread position: 140-512
Cow position: chr6:35613628-35613273 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 284, 29

Conread position: 140-594
Cow position: chr6:16746121-16746575 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 140-600
Cow position: chr6:35435784-35436222 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 141-367
Cow position: chr6:15923215-15922995 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 141-393
Cow position: chr6:242596-242841 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 87

Conread position: 142-371
Cow position: chr6:48344111-48344340 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 111, 145

Conread position: 142-523
Cow position: chr6:60442202-60442562 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 142-542
Cow position: chr6:37199766-37199364 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 260

Conread position: 142-603
Cow position: chr6:8965873-8966326 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 32

Conread position: 142-632
Cow position: chr6:5609657-5609173 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 137

Conread position: 143-524
Cow position: chr6:53651824-53652196 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 142

Conread position: 144-600
Cow position: chr6:17997530-17997082 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 135

Conread position: 145-607
Cow position: chr6:59620455-59620899 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 145

Conread position: 145-634
Cow position: chr6:65702615-65702138 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 146-603
Cow position: chr6:62324777-62325231 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 147-401
Cow position: chr6:24515405-24515159 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 147-538
Cow position: chr6:59069840-59069450 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 139

Conread position: 147-573
Cow position: chr6:63921773-63922186 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 286
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 218, 6

Conread position: 147-600
Cow position: chr6:57405336-57404901 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 37

Conread position: 147-603
Cow position: chr6:53025010-53024573 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 97

Conread position: 148-354
Cow position: chr6:50271305-50271106 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 165, 131

Conread position: 148-360
Cow position: chr6:53139140-53138924 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 148-381
Cow position: chr6:46400616-46400394 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 148-615
Cow position: chr6:23532452-23532899 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 120

Conread position: 149-401
Cow position: chr6:18968981-18968741 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 21

Conread position: 149-537
Cow position: chr6:67456493-67456887 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 228

Conread position: 149-595
Cow position: chr6:58732524-58732070 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 108

Conread position: 150-319
Cow position: chr6:31928064-31928221 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 62

Conread position: 150-438
Cow position: chr6:47988981-47989242 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 20

Conread position: 150-639
Cow position: chr6:45606657-45606185 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 288
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 277, 19

Conread position: 151-511
Cow position: chr6:7989621-7989274 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 151-539
Cow position: chr6:54864874-54864489 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 18

Conread position: 151-626
Cow position: chr6:21231329-21231773 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 152-433
Cow position: chr6:61137158-61137440 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 17

Conread position: 152-521
Cow position: chr6:12845175-12845532 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 17

Conread position: 152-613
Cow position: chr6:19695600-19696055 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 17

Conread position: 153-535
Cow position: chr6:6098488-6098099 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 105

Conread position: 153-586
Cow position: chr6:38641292-38641715 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 87

Conread position: 153-591
Cow position: chr6:5114254-5113821 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 153-600
Cow position: chr6:32269077-32268652 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 43

Conread position: 154-607
Cow position: chr6:20157120-20157577 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 16

Conread position: 156-418
Cow position: chr6:48425524-48425274 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 200, 79

Conread position: 156-600
Cow position: chr6:66131105-66131554 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 72

Conread position: 157-566
Cow position: chr6:528478-528089 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 16

Conread position: 157-603
Cow position: chr6:10400097-10399670 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 83

Conread position: 159-360
Cow position: chr6:33276839-33277040 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 54

Conread position: 159-607
Cow position: chr6:55546360-55545929 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 29

Conread position: 160-337
Cow position: chr6:46245522-46245343 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 83, 0

Conread position: 160-505
Cow position: chr6:28414845-28414509 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 216
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 21

Conread position: 160-518
Cow position: chr6:8788236-8787887 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 160-521
Cow position: chr6:63299222-63298878 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 161-404
Cow position: chr6:415897-416142 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 74, 13

Conread position: 161-590
Cow position: chr6:12092182-12091761 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 70

Conread position: 161-601
Cow position: chr6:48187779-48187338 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 302
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 85, 73

Conread position: 163-323
Cow position: chr6:21812534-21812690 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 119, 0

Conread position: 163-422
Cow position: chr6:53731325-53731578 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 163-513
Cow position: chr6:16423503-16423846 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 163-565
Cow position: chr6:16191471-16191864 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 15

Conread position: 163-624
Cow position: chr6:7128598-7128145 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 94

Conread position: 164-481
Cow position: chr6:22503118-22502798 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 76, 215

Conread position: 164-542
Cow position: chr6:6400753-6401128 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 109

Conread position: 164-587
Cow position: chr6:52412659-52413084 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 116

Conread position: 164-589
Cow position: chr6:63720004-63720416 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 63

Conread position: 164-615
Cow position: chr6:21456885-21456427 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 166-492
Cow position: chr6:28318216-28318521 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 285, 74

Conread position: 166-539
Cow position: chr6:53519816-53519454 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 166-598
Cow position: chr6:21062076-21061658 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 64

Conread position: 167-299
Cow position: chr6:17220646-17220520 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 167-432
Cow position: chr6:8187711-8187458 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 104

Conread position: 168-608
Cow position: chr6:63252114-63251679 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 115

Conread position: 168-635
Cow position: chr6:17313538-17314005 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 119

Conread position: 171-538
Cow position: chr6:65259655-65259322 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 229, 39

Conread position: 171-539
Cow position: chr6:47799110-47799464 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 173-593
Cow position: chr6:30973854-30974256 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 132

Conread position: 175-477
Cow position: chr6:25008530-25008828 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 211, 94

Conread position: 175-634
Cow position: chr6:1703630-1704064 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 96

Conread position: 176-607
Cow position: chr6:12668921-12669340 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 66

Conread position: 177-614
Cow position: chr6:47574723-47575140 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 105

Conread position: 178-628
Cow position: chr6:32518054-32517621 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 308
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 110

Conread position: 179-539
Cow position: chr6:37783234-37783571 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 108

Conread position: 179-625
Cow position: chr6:44566232-44566687 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 303
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 68, 107

Conread position: 180-526
Cow position: chr6:52901062-52901396 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 251, 38

Conread position: 181-490
Cow position: chr6:54936399-54936701 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 113

Conread position: 181-512
Cow position: chr6:1499460-1499784 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 103

Conread position: 183-421
Cow position: chr6:49604507-49604729 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 184-432
Cow position: chr6:54287904-54288140 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 48

Conread position: 187-348
Cow position: chr6:18904515-18904356 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 75

Conread position: 187-601
Cow position: chr6:27888178-27888579 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 188-435
Cow position: chr6:9838991-9839239 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 102, 185

Conread position: 188-556
Cow position: chr6:17334228-17333859 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 103

Conread position: 188-599
Cow position: chr6:65264706-65264317 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 53

Conread position: 188-601
Cow position: chr6:47355653-47356062 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 91

Conread position: 188-607
Cow position: chr6:59798497-59798891 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 291, 40

Conread position: 188-639
Cow position: chr6:59104437-59104875 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 74

Conread position: 189-581
Cow position: chr6:8125162-8125545 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 50

Conread position: 189-614
Cow position: chr6:15447378-15446944 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 85

Conread position: 190-539
Cow position: chr6:35993408-35993754 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 153

Conread position: 190-611
Cow position: chr6:60819346-60819761 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 92

Conread position: 190-613
Cow position: chr6:63094099-63093664 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 96

Conread position: 190-633
Cow position: chr6:53453599-53454031 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 299
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 149, 84

Conread position: 190-643
Cow position: chr6:11246595-11247044 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 40

Conread position: 191-418
Cow position: chr6:58364180-58363959 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 92

Conread position: 191-598
Cow position: chr6:19446092-19446486 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 45

Conread position: 192-509
Cow position: chr6:47640604-47640291 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 44, 94

Conread position: 192-521
Cow position: chr6:19012902-19013216 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 154, 48

Conread position: 192-539
Cow position: chr6:16764809-16764475 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 201, 59

Conread position: 194-430
Cow position: chr6:40834638-40834406 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 92

Conread position: 194-601
Cow position: chr6:60850555-60850144 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 92

Conread position: 195-434
Cow position: chr6:44984162-44984396 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 90

Conread position: 195-629
Cow position: chr6:60783706-60784133 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 196-363
Cow position: chr6:32987161-32986998 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 196-367
Cow position: chr6:59108779-59108949 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 196-603
Cow position: chr6:14914402-14913996 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 35

Conread position: 196-613
Cow position: chr6:15243088-15243509 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 91

Conread position: 197-382
Cow position: chr6:54492621-54492434 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 83

Conread position: 197-492
Cow position: chr6:12543095-12542806 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 198-359
Cow position: chr6:50020369-50020533 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 96

Conread position: 198-421
Cow position: chr6:633522-633304 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 88

Conread position: 199-436
Cow position: chr6:49694215-49694447 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 60

Conread position: 199-492
Cow position: chr6:55763694-55763977 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 190, 61

Conread position: 199-603
Cow position: chr6:120079-120475 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 95

Conread position: 199-607
Cow position: chr6:31847380-31847002 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 199-639
Cow position: chr6:6965543-6965121 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 293
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 319, 13

Conread position: 199-642
Cow position: chr6:57546376-57545955 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 75

Conread position: 200-551
Cow position: chr6:48112045-48112382 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 329, 40

Conread position: 200-630
Cow position: chr6:3595634-3596059 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 286
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 54

Conread position: 201-600
Cow position: chr6:19264658-19264266 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 85

Conread position: 202-354
Cow position: chr6:22254142-22253993 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 203-594
Cow position: chr6:60739859-60740239 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 203-628
Cow position: chr6:1371380-1370967 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 275
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 13

Conread position: 206-434
Cow position: chr6:57298867-57299081 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 206-495
Cow position: chr6:61608354-61608639 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 80

Conread position: 206-566
Cow position: chr6:67323163-67323507 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 247, 77

Conread position: 206-594
Cow position: chr6:19755230-19754849 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 47, 55

Conread position: 207-542
Cow position: chr6:4692136-4691802 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 207-603
Cow position: chr6:19292660-19293036 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 185, 27

Conread position: 207-608
Cow position: chr6:3464132-3464534 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 270
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 46, 79

Conread position: 207-628
Cow position: chr6:38609816-38610237 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 75

Conread position: 208-601
Cow position: chr6:48988284-48988670 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 267
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 84

Conread position: 208-603
Cow position: chr6:67574256-67574628 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 52

Conread position: 211-422
Cow position: chr6:21052654-21052453 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 211-566
Cow position: chr6:57571325-57571679 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 32, 75

Conread position: 212-601
Cow position: chr6:54036282-54035904 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 262
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 301, 70

Conread position: 212-603
Cow position: chr6:46283145-46282754 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 158, 28

Conread position: 212-614
Cow position: chr6:9219126-9219514 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 396, 67

Conread position: 213-419
Cow position: chr6:29266059-29266255 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 213-537
Cow position: chr6:16316160-16316485 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 140, 69

Conread position: 214-423
Cow position: chr6:19351299-19351100 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 206, 68

Conread position: 214-537
Cow position: chr6:582412-582104 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 216-542
Cow position: chr6:3081273-3080942 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 174, 74

Conread position: 216-614
Cow position: chr6:4559446-4559054 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 343, 35

Conread position: 216-614
Cow position: chr6:19996477-19996865 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 217-356
Cow position: chr6:50509536-50509669 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 218-594
Cow position: chr6:48010666-48010295 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 43

Conread position: 219-614
Cow position: chr6:28156286-28155924 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 349, 32

Conread position: 221-614
Cow position: chr6:43135082-43134690 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 221-630
Cow position: chr6:55209418-55209825 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 11

Conread position: 223-542
Cow position: chr6:21234909-21235217 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 217, 5

Conread position: 223-602
Cow position: chr6:38640096-38640468 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 5

Conread position: 223-613
Cow position: chr6:45388195-45388568 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 320, 5

Conread position: 223-621
Cow position: chr6:60118010-60118398 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 224-601
Cow position: chr6:21399892-21399518 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 19, 45

Conread position: 224-633
Cow position: chr6:30123327-30122899 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 286
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 58

Conread position: 227-624
Cow position: chr6:62669742-62670129 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 226, 27

Conread position: 228-603
Cow position: chr6:53841630-53841265 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 310, 52

Conread position: 229-492
Cow position: chr6:20206146-20206399 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 223, 33

Conread position: 230-405
Cow position: chr6:358019-357849 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 232-602
Cow position: chr6:5330278-5330651 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 232-603
Cow position: chr6:25615227-25614852 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 139, 15

Conread position: 233-600
Cow position: chr6:23402115-23401760 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 292, 49

Conread position: 233-601
Cow position: chr6:62929370-62929734 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 307, 57

Conread position: 236-566
Cow position: chr6:36189574-36189901 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 287, 59

Conread position: 236-621
Cow position: chr6:50467012-50467396 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 305, 46

Conread position: 240-614
Cow position: chr6:22850364-22850001 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 213, 42

Conread position: 241-521
Cow position: chr6:54573125-54573412 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 42

Conread position: 241-592
Cow position: chr6:16261668-16262008 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 274, 14

Conread position: 242-640
Cow position: chr6:54854132-54854522 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 166, 40

Conread position: 243-539
Cow position: chr6:21514735-21514437 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 135

Conread position: 243-542
Cow position: chr6:58597620-58597330 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 138, 39

Conread position: 247-614
Cow position: chr6:46173370-46173012 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 114

Conread position: 247-628
Cow position: chr6:10039609-10039992 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 43

Conread position: 247-628
Cow position: chr6:17704707-17705095 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 108, 33

Conread position: 248-614
Cow position: chr6:59603320-59602966 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 11, 36

Conread position: 248-633
Cow position: chr6:51526380-51526759 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 247
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 277, 31

Conread position: 249-599
Cow position: chr6:19045513-19045862 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 292, 20

Conread position: 249-600
Cow position: chr6:58370643-58370982 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 249-601
Cow position: chr6:16266609-16266965 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 41

Conread position: 251-601
Cow position: chr6:54208247-54207896 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 290, 25

Conread position: 254-607
Cow position: chr6:1429534-1429876 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 28

Conread position: 256-380
Cow position: chr6:61644939-61644815 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 256-402
Cow position: chr6:14153223-14153080 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 26

Conread position: 256-603
Cow position: chr6:143480-143140 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 10, 80

Conread position: 256-607
Cow position: chr6:62371284-62370945 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 112

Conread position: 258-536
Cow position: chr6:3592300-3592565 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 259-492
Cow position: chr6:377029-377249 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 174, 23

Conread position: 260-529
Cow position: chr6:54809490-54809227 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 22

Conread position: 260-531
Cow position: chr6:55161366-55161633 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 154, 22

Conread position: 260-611
Cow position: chr6:17794855-17794510 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 265, 22

Conread position: 267-600
Cow position: chr6:37462930-37463240 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 15

Conread position: 273-523
Cow position: chr6:58608531-58608289 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 90

Conread position: 273-585
Cow position: chr6:9719010-9718697 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 106, 145

Conread position: 273-601
Cow position: chr6:24110198-24110520 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 17

Conread position: 273-603
Cow position: chr6:44867627-44867309 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 247, 20

Conread position: 276-435
Cow position: chr6:54365088-54364931 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 14

Conread position: 276-566
Cow position: chr6:67281809-67282092 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 78

Conread position: 276-626
Cow position: chr6:37395493-37395141 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 14

Conread position: 281-603
Cow position: chr6:27240087-27239766 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 242, 9

Conread position: 282-614
Cow position: chr6:62437332-62437665 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 15

Conread position: 283-546
Cow position: chr6:2153671-2153421 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 283-601
Cow position: chr6:24536621-24536290 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 12

Conread position: 284-614
Cow position: chr6:8599926-8600254 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 77

Conread position: 284-623
Cow position: chr6:16288131-16287806 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 231, 85

Conread position: 284-633
Cow position: chr6:33509711-33510056 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 77

Conread position: 285-531
Cow position: chr6:66375408-66375169 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 209, 76

Conread position: 285-539
Cow position: chr6:23466107-23465862 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 205, 77

Conread position: 285-607
Cow position: chr6:13565006-13565328 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 102

Conread position: 285-607
Cow position: chr6:17549059-17548725 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 285-622
Cow position: chr6:60274086-60273755 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 26

Conread position: 285-628
Cow position: chr6:23025190-23024833 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 12

Conread position: 286-548
Cow position: chr6:10487510-10487765 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 213, 101

Conread position: 286-569
Cow position: chr6:61524278-61524000 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 249, 50

Conread position: 286-600
Cow position: chr6:22985935-22985627 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 210, 101

Conread position: 286-603
Cow position: chr6:68376399-68376077 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 9

Conread position: 286-606
Cow position: chr6:33206664-33206970 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 88

Conread position: 286-621
Cow position: chr6:40049992-40050331 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 158

Conread position: 286-626
Cow position: chr6:59718719-59719080 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 109, 91

Conread position: 287-584
Cow position: chr6:55205388-55205088 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 150, 74

Conread position: 287-614
Cow position: chr6:694223-693895 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 189, 49

Conread position: 289-603
Cow position: chr6:17068723-17068417 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 166, 80

Conread position: 290-506
Cow position: chr6:54600273-54600486 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 291-522
Cow position: chr6:59770154-59770376 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 79

Conread position: 293-539
Cow position: chr6:36284172-36284412 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 134, 100

Conread position: 293-542
Cow position: chr6:60516758-60516999 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 294-509
Cow position: chr6:61142633-61142421 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 78

Conread position: 294-524
Cow position: chr6:39137792-39138031 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 294-594
Cow position: chr6:22525263-22525554 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 294-603
Cow position: chr6:68272512-68272841 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 70, 35

Conread position: 294-606
Cow position: chr6:32043783-32044091 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 221, 42

Conread position: 294-608
Cow position: chr6:18118121-18117805 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 207, 95

Conread position: 294-613
Cow position: chr6:581813-581491 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 194, 69

Conread position: 294-614
Cow position: chr6:24339215-24339537 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 163, 19

Conread position: 295-576
Cow position: chr6:67643759-67643478 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 197, 61

Conread position: 295-616
Cow position: chr6:9302784-9302472 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 67

Conread position: 296-607
Cow position: chr6:6724436-6724752 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 67

Conread position: 297-577
Cow position: chr6:31078936-31078655 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 19

Conread position: 298-601
Cow position: chr6:66590014-66590308 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 176
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 73

Conread position: 299-603
Cow position: chr6:60468173-60468469 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 205, 83

Conread position: 299-623
Cow position: chr6:13510110-13510429 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 76

Conread position: 300-538
Cow position: chr6:59631987-59631752 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 74

Conread position: 300-600
Cow position: chr6:5845235-5844933 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 213, 65

Conread position: 303-591
Cow position: chr6:68816107-68816396 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 232, 5

Conread position: 304-625
Cow position: chr6:51530245-51529930 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 62

Conread position: 305-600
Cow position: chr6:18144135-18144436 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 31

Conread position: 306-631
Cow position: chr6:7627905-7628239 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 66

Conread position: 308-555
Cow position: chr6:68652408-68652162 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 186, 66

Conread position: 310-601
Cow position: chr6:59438501-59438225 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 117, 63

Conread position: 310-625
Cow position: chr6:18608868-18608550 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 98, 52

Conread position: 310-643
Cow position: chr6:56986699-56986375 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 60

Conread position: 311-603
Cow position: chr6:60144251-60143961 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 190, 54

Conread position: 314-628
Cow position: chr6:53145732-53145417 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 139, 68

Conread position: 315-628
Cow position: chr6:50269719-50269419 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 193, 8

Conread position: 317-628
Cow position: chr6:94236-93937 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 317-628
Cow position: chr6:3350973-3351289 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 63, 297

Conread position: 318-603
Cow position: chr6:2078865-2078578 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 73

Conread position: 323-566
Cow position: chr6:7801434-7801194 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 203, 61

Conread position: 326-539
Cow position: chr6:55535786-55535581 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 326-591
Cow position: chr6:2584904-2585167 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 200, 54

Conread position: 326-599
Cow position: chr6:55417564-55417299 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 92, 43

Conread position: 326-601
Cow position: chr6:67728333-67728614 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 39

Conread position: 326-603
Cow position: chr6:47958775-47959043 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 64

Conread position: 326-611
Cow position: chr6:66570400-66570671 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 59

Conread position: 328-588
Cow position: chr6:34119390-34119140 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 41

Conread position: 329-605
Cow position: chr6:7119654-7119391 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 167, 40

Conread position: 330-613
Cow position: chr6:3329954-3330246 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 42

Conread position: 332-537
Cow position: chr6:19131398-19131597 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 333-657
Cow position: chr6:47778843-47779166 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 211
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 206, 32

Conread position: 334-600
Cow position: chr6:41656073-41655820 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 335-614
Cow position: chr6:67451401-67451123 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 191, 40

Conread position: 339-582
Cow position: chr6:36920999-36920758 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 14

Conread position: 339-607
Cow position: chr6:47540871-47540598 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 88, 11

Conread position: 339-608
Cow position: chr6:12964828-12965097 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 165, 23

Conread position: 339-614
Cow position: chr6:41015001-41014726 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 26

Conread position: 339-614
Cow position: chr6:50504429-50504705 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 24

Conread position: 339-614
Cow position: chr6:57089172-57089450 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 34

Conread position: 339-614
Cow position: chr6:63065800-63066087 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 117, 26

Conread position: 340-628
Cow position: chr6:62683343-62683638 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 50

Conread position: 341-514
Cow position: chr6:55502743-55502912 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 33

Conread position: 341-678
Cow position: chr6:55297123-55296781 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 48, 297

Conread position: 342-531
Cow position: chr6:53089986-53090171 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 155, 32

Conread position: 342-603
Cow position: chr6:26155130-26155383 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 186, 26

Conread position: 342-640
Cow position: chr6:21293518-21293223 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 87, 23

Conread position: 343-614
Cow position: chr6:67451667-67451413 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 262, 22

Conread position: 343-632
Cow position: chr6:50862920-50863214 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 20

Conread position: 344-607
Cow position: chr6:42567472-42567738 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 21

Conread position: 345-635
Cow position: chr6:35727823-35728115 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 6, 13

Conread position: 347-624
Cow position: chr6:62056596-62056873 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 257, 23

Conread position: 348-603
Cow position: chr6:1103752-1103507 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 28

Conread position: 351-595
Cow position: chr6:48379628-48379381 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 25

Conread position: 355-625
Cow position: chr6:61109775-61110040 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 36

Conread position: 359-600
Cow position: chr6:12761268-12761515 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 114

Conread position: 362-601
Cow position: chr6:62078915-62079154 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 36

Conread position: 362-603
Cow position: chr6:13653347-13653584 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 159, 79

Conread position: 366-603
Cow position: chr6:21535036-21535278 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 18

Conread position: 370-603
Cow position: chr6:48097601-48097365 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 18

Conread position: 371-569
Cow position: chr6:69153418-69153616 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 155, 19

Conread position: 375-624
Cow position: chr6:21475732-21475987 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 131

Conread position: 376-614
Cow position: chr6:50810662-50810424 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 14

Conread position: 377-608
Cow position: chr6:57079434-57079669 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 149, 13

Conread position: 377-614
Cow position: chr6:21470418-21470182 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 119, 9

Conread position: 377-614
Cow position: chr6:60850712-60850948 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 12

Conread position: 377-643
Cow position: chr6:42034783-42035049 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 12

Conread position: 378-603
Cow position: chr6:54831486-54831716 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 65

Conread position: 378-625
Cow position: chr6:1941820-1941575 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 11

Conread position: 388-584
Cow position: chr6:23110180-23109972 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 388-603
Cow position: chr6:35319114-35318896 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 150, 212

Conread position: 388-603
Cow position: chr6:53546055-53546267 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 134, 0

Conread position: 388-614
Cow position: chr6:30502104-30501873 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 137, 56

Conread position: 388-614
Cow position: chr6:36809188-36808953 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 388-630
Cow position: chr6:21715068-21715315 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 39

Conread position: 388-631
Cow position: chr6:30023905-30024145 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 217, 139

Conread position: 389-585
Cow position: chr6:1871177-1870977 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 389-622
Cow position: chr6:1866753-1866988 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 173, 18

Conread position: 390-539
Cow position: chr6:23610964-23611108 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 390-603
Cow position: chr6:58725392-58725605 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 137, 59

Conread position: 391-569
Cow position: chr6:31865121-31865299 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 148, 23

Conread position: 391-601
Cow position: chr6:66947795-66947584 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 48

Conread position: 391-602
Cow position: chr6:33150269-33150057 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 95

Conread position: 391-614
Cow position: chr6:32453408-32453643 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 95

Conread position: 391-620
Cow position: chr6:42483438-42483669 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 55

Conread position: 393-627
Cow position: chr6:8365836-8366085 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 50

Conread position: 396-549
Cow position: chr6:8731436-8731599 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 52

Conread position: 396-611
Cow position: chr6:51933582-51933785 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 396-622
Cow position: chr6:50771331-50771104 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 130, 47

Conread position: 396-623
Cow position: chr6:58304442-58304670 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 122

Conread position: 396-627
Cow position: chr6:42728673-42728911 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 104

Conread position: 396-628
Cow position: chr6:16380572-16380812 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 135, 0

Conread position: 396-636
Cow position: chr6:54846251-54846004 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 397-588
Cow position: chr6:33450941-33450754 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 43

Conread position: 397-600
Cow position: chr6:48435863-48436065 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 50

Conread position: 397-601
Cow position: chr6:66259758-66259973 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 188

Conread position: 399-603
Cow position: chr6:16090934-16091135 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 44

Conread position: 400-614
Cow position: chr6:8369456-8369673 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 32

Conread position: 401-625
Cow position: chr6:8688815-8688591 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 205

Conread position: 401-631
Cow position: chr6:22876898-22876664 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 212

Conread position: 402-625
Cow position: chr6:3936818-3937048 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 124, 33

Conread position: 403-601
Cow position: chr6:8468700-8468895 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 167

Conread position: 407-614
Cow position: chr6:45921175-45920970 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 36

Conread position: 409-607
Cow position: chr6:55044601-55044399 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 88

Conread position: 409-614
Cow position: chr6:67633519-67633311 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 61

Conread position: 410-592
Cow position: chr6:34380773-34380589 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 64

Conread position: 410-600
Cow position: chr6:21350991-21350796 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 61

Conread position: 410-603
Cow position: chr6:53711444-53711641 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 410-608
Cow position: chr6:15058418-15058617 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 187

Conread position: 410-614
Cow position: chr6:6614662-6614876 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 25

Conread position: 410-615
Cow position: chr6:57072464-57072673 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 33

Conread position: 410-633
Cow position: chr6:59015528-59015311 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 165, 37

Conread position: 411-611
Cow position: chr6:19563441-19563233 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 411-614
Cow position: chr6:13742031-13742236 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 60

Conread position: 411-614
Cow position: chr6:36225151-36225361 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 414-592
Cow position: chr6:47450876-47450692 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 19

Conread position: 415-611
Cow position: chr6:21083494-21083295 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 416-601
Cow position: chr6:62724603-62724794 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 416-603
Cow position: chr6:25773168-25772981 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 31

Conread position: 416-635
Cow position: chr6:55548486-55548264 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 141

Conread position: 417-616
Cow position: chr6:54820880-54821085 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 418-602
Cow position: chr6:34722055-34721874 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 153, 59

Conread position: 418-630
Cow position: chr6:45160008-45159790 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 419-614
Cow position: chr6:36537310-36537114 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 420-591
Cow position: chr6:40682611-40682442 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 27

Conread position: 420-603
Cow position: chr6:41226778-41226609 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 421-616
Cow position: chr6:60186610-60186400 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 424-607
Cow position: chr6:62987640-62987462 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 426-599
Cow position: chr6:32006397-32006222 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 25

Conread position: 426-603
Cow position: chr6:50883618-50883441 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 92

Conread position: 433-633
Cow position: chr6:67543993-67543787 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 438-611
Cow position: chr6:8640778-8640597 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 446-608
Cow position: chr6:66329625-66329461 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 130

Conread position: 446-613
Cow position: chr6:24651904-24651734 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 125

Conread position: 446-614
Cow position: chr6:55404989-55405163 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 166

Conread position: 448-606
Cow position: chr6:66293564-66293724 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 126

Conread position: 449-600
Cow position: chr6:36938948-36939109 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 449-603
Cow position: chr6:66058627-66058471 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 449-607
Cow position: chr6:47150900-47151060 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 449-614
Cow position: chr6:34423378-34423211 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 449-630
Cow position: chr6:15974443-15974261 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 152

Conread position: 450-592
Cow position: chr6:61644777-61644629 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 450-593
Cow position: chr6:27219249-27219394 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 450-599
Cow position: chr6:44540889-44541038 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 450-601
Cow position: chr6:4760073-4760229 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 450-601
Cow position: chr6:16411692-16411849 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 450-601
Cow position: chr6:21184141-21183987 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 28

Conread position: 450-601
Cow position: chr6:29851450-29851604 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 450-601
Cow position: chr6:58697550-58697393 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 450-601
Cow position: chr6:59101240-59101083 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 450-602
Cow position: chr6:24903496-24903338 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 450-603
Cow position: chr6:19936488-19936330 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 94, 50

Conread position: 450-603
Cow position: chr6:21175419-21175572 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 450-603
Cow position: chr6:49685899-49686058 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 450-607
Cow position: chr6:43906602-43906438 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 450-611
Cow position: chr6:19225302-19225146 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 450-614
Cow position: chr6:26408423-26408253 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 450-614
Cow position: chr6:35985055-35984885 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 450-614
Cow position: chr6:39414904-39415074 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 62

Conread position: 450-615
Cow position: chr6:57467678-57467851 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 450-622
Cow position: chr6:8187108-8186929 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 450-624
Cow position: chr6:34076243-34076422 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 450-627
Cow position: chr6:14150298-14150121 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 159

Conread position: 450-627
Cow position: chr6:21052368-21052184 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 450-628
Cow position: chr6:44123411-44123588 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 153, 60

Conread position: 450-628
Cow position: chr6:44544067-44543881 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 68

Conread position: 450-628
Cow position: chr6:52190865-52190690 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 450-629
Cow position: chr6:28559619-28559804 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 450-630
Cow position: chr6:54840426-54840237 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 163

Conread position: 450-633
Cow position: chr6:16627816-16627997 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 450-635
Cow position: chr6:69374751-69374562 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 33

Conread position: 451-601
Cow position: chr6:14152808-14152655 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 451-603
Cow position: chr6:48278806-48278657 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 451-603
Cow position: chr6:53811665-53811824 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 451-606
Cow position: chr6:16357519-16357682 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 56

Conread position: 451-607
Cow position: chr6:47790717-47790556 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 451-610
Cow position: chr6:55919852-55919687 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 451-614
Cow position: chr6:28088965-28088794 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 46

Conread position: 451-614
Cow position: chr6:28562086-28561918 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 50

Conread position: 451-614
Cow position: chr6:45471507-45471338 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 161

Conread position: 451-614
Cow position: chr6:51542981-51543153 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 25

Conread position: 451-614
Cow position: chr6:54889682-54889852 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 158

Conread position: 451-614
Cow position: chr6:62805725-62805896 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 451-615
Cow position: chr6:56581976-56581806 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 159

Conread position: 451-624
Cow position: chr6:53732064-53732245 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 451-626
Cow position: chr6:36163826-36164006 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 157

Conread position: 451-628
Cow position: chr6:15587512-15587329 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 451-628
Cow position: chr6:18440395-18440211 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 126

Conread position: 451-630
Cow position: chr6:26638470-26638655 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 154

Conread position: 451-634
Cow position: chr6:59687730-59687541 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 451-641
Cow position: chr6:16137688-16137492 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 161

Conread position: 452-592
Cow position: chr6:2757868-2758009 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 56

Conread position: 452-603
Cow position: chr6:4323413-4323560 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 452-603
Cow position: chr6:7291399-7291549 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 87

Conread position: 452-611
Cow position: chr6:8726761-8726923 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 452-611
Cow position: chr6:63182372-63182532 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 150, 0

Conread position: 452-614
Cow position: chr6:54406716-54406558 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 128

Conread position: 453-600
Cow position: chr6:60777855-60778004 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 123

Conread position: 453-602
Cow position: chr6:47245864-47246019 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 454-601
Cow position: chr6:49825010-49824856 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 455-616
Cow position: chr6:50445031-50444863 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 455-618
Cow position: chr6:67374590-67374423 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 456-581
Cow position: chr6:53235565-53235437 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 456-599
Cow position: chr6:40833927-40833787 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 456-601
Cow position: chr6:31928724-31928875 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 456-601
Cow position: chr6:59297140-59297281 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 48

Conread position: 456-602
Cow position: chr6:30825681-30825540 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 456-602
Cow position: chr6:38032945-38033095 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 456-603
Cow position: chr6:37994297-37994442 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 456-613
Cow position: chr6:55945876-55945708 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 456-614
Cow position: chr6:12099599-12099441 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 456-626
Cow position: chr6:26764740-26764561 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 158

Conread position: 457-608
Cow position: chr6:35775570-35775728 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 457-614
Cow position: chr6:57935484-57935327 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 68, 16

Conread position: 457-616
Cow position: chr6:5445755-5445919 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 60

Conread position: 457-628
Cow position: chr6:54828234-54828056 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 457-640
Cow position: chr6:13097312-13097123 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 154

Conread position: 458-600
Cow position: chr6:4699797-4699940 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 458-601
Cow position: chr6:5600771-5600629 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 53

Conread position: 458-623
Cow position: chr6:16016123-16016296 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 49

Conread position: 459-609
Cow position: chr6:66302515-66302362 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 459-614
Cow position: chr6:21347060-21346904 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 459-614
Cow position: chr6:56799802-56799642 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 459-626
Cow position: chr6:56359951-56360123 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 459-628
Cow position: chr6:47989516-47989689 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 462-630
Cow position: chr6:57320504-57320332 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 462-632
Cow position: chr6:18152486-18152654 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 111

Conread position: 462-636
Cow position: chr6:6117551-6117380 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 463-601
Cow position: chr6:23381574-23381430 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 465-614
Cow position: chr6:43770802-43770652 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 466-624
Cow position: chr6:55196310-55196477 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 468-611
Cow position: chr6:11262846-11262987 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 469-601
Cow position: chr6:60088376-60088239 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 46

Conread position: 470-601
Cow position: chr6:62539501-62539372 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 475-614
Cow position: chr6:67810878-67810737 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 487-600
Cow position: chr6:60673953-60674066 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.