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Cow genome map

           
Conread name:
           
Spl1-SPL010028D01
        

               
Conread position:
               
278-590
               

               
Cow position:
               
chr15:33604919-33605215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
316-586
               

               
Cow position:
               
chr15:26404302-26404558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr15:662446-662250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr15:14870768-14871039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr15:40957604-40957872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
331-586
               

               
Cow position:
               
chr15:22531700-22531951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
213, 6
               

               
Conread position:
               
337-590
               

               
Cow position:
               
chr15:44051458-44051204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
343-502
               

               
Cow position:
               
chr15:43114682-43114517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
345-585
               

               
Cow position:
               
chr15:38883194-38883444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
345-588
               

               
Cow position:
               
chr15:39436262-39436503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
347-522
               

               
Cow position:
               
chr15:49274004-49274176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
347-582
               

               
Cow position:
               
chr15:21389117-21388880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
97, 71
               

               
Conread position:
               
347-586
               

               
Cow position:
               
chr15:9871367-9871121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 77
               

               
Conread position:
               
347-588
               

               
Cow position:
               
chr15:24128078-24128321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
347-589
               

               
Cow position:
               
chr15:41418782-41418525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr15:20081821-20082053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
202, 65
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr15:24305432-24305185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr15:34104307-34104559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 194
               

               
Conread position:
               
348-544
               

               
Cow position:
               
chr15:17859179-17858991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
348-567
               

               
Cow position:
               
chr15:22871660-22871880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
193, 80
               

               
Conread position:
               
348-589
               

               
Cow position:
               
chr15:21803610-21803365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr15:29810170-29810402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr15:52380339-52380584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 191
               

               
Conread position:
               
349-518
               

               
Cow position:
               
chr15:10231698-10231521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
349-553
               

               
Cow position:
               
chr15:10608254-10608049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
349-567
               

               
Cow position:
               
chr15:44640948-44641168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr15:1330051-1329808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr15:33303375-33303625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 241
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:794969-794720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:5727702-5727931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:7192210-7191968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:12304690-12304934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 85
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:23696859-23696624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:26903241-26903487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 168
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:29604648-29604424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:33976635-33976400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:35417573-35417328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:45479054-45479300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:46563432-46563191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr15:47821867-47822094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
350-459
               

               
Cow position:
               
chr15:14176446-14176339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
350-492
               

               
Cow position:
               
chr15:36793441-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr15:50089032-50089180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
350-501
               

               
Cow position:
               
chr15:31928843-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr15:16448736-16448892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr15:28258405-28258249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr15:34284357-34284205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr15:39326463-39326308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
350-517
               

               
Cow position:
               
chr15:30470919-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
350-526
               

               
Cow position:
               
chr15:6331986-6331814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
350-526
               

               
Cow position:
               
chr15:9648654-9648476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
350-530
               

               
Cow position:
               
chr15:7308104-7307920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
350-531
               

               
Cow position:
               
chr15:915790-915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
350-532
               

               
Cow position:
               
chr15:20422728-20422544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
350-535
               

               
Cow position:
               
chr15:12870811-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
350-538
               

               
Cow position:
               
chr15:22930297-22930099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
350-539
               

               
Cow position:
               
chr15:5566977-5567184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr15:4178891-4178695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr15:37205101-37205287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr15:5726378-5726569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 92
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr15:8354094-8354288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 162
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr15:18671403-18671211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 163
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr15:22553489-22553301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr15:35945582-35945771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
350-549
               

               
Cow position:
               
chr15:25386498-25386694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
350-549
               

               
Cow position:
               
chr15:34140034-34140229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
350-550
               

               
Cow position:
               
chr15:11559302-11559104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
350-552
               

               
Cow position:
               
chr15:4295816-4296019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
350-553
               

               
Cow position:
               
chr15:12655863-12655656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
350-553
               

               
Cow position:
               
chr15:50177162-50177361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
350-554
               

               
Cow position:
               
chr15:39316789-39316578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
350-556
               

               
Cow position:
               
chr15:11560462-11560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
350-556
               

               
Cow position:
               
chr15:43750548-43750773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr15:275706-275903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
350-565
               

               
Cow position:
               
chr15:16657545-16657760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
350-567
               

               
Cow position:
               
chr15:21582871-21582649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
350-568
               

               
Cow position:
               
chr15:23275595-23275809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr15:23180493-23180703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr15:244834-245055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr15:38877251-38877022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
194, 67
               

               
Conread position:
               
350-581
               

               
Cow position:
               
chr15:5044423-5044171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
350-582
               

               
Cow position:
               
chr15:16439778-16439540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-584
               

               
Cow position:
               
chr15:24038349-24038123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr15:16928041-16927790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr15:20472495-20472257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr15:42789095-42788862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr15:13515419-13515661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr15:43626522-43626751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr15:49922187-49922429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-587
               

               
Cow position:
               
chr15:9970925-9970693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
350-587
               

               
Cow position:
               
chr15:33643143-33643376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
97, 86
               

               
Conread position:
               
350-587
               

               
Cow position:
               
chr15:43030974-43030730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:4093880-4093633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 160
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:6647502-6647737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:16667450-16667208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:20534397-20534159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:31616954-31616713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:38394481-38394711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr15:47042576-47042346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr15:225751-225511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
146, 70
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr15:2141250-2141003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr15:11658520-11658273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr15:12170297-12170538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:1297792-1298030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:1804282-1804035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:3700234-3699989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:4138185-4138430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:4534962-4535200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:4676945-4676713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:5683198-5683427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:6657150-6657400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:6970040-6970279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:8007033-8007275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:9928412-9928651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:10088372-10088607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:11011550-11011316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:13387130-13387376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:13554406-13554634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:14505483-14505719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:15880979-15881228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:16307475-16307709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:16476686-16476452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 110
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:16583639-16583418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:17084262-17084505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:18720367-18720607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:19119558-19119318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 196
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:19186565-19186322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:20351885-20352127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:20391222-20390985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:20487150-20486924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:21941793-21941552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 63
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:22939272-22939040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:23568074-23567833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:23768204-23767972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:24797757-24797520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:24941318-24941093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:24994460-24994232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:25208704-25208472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:27900457-27900210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:27973164-27972922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:28924702-28924473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:30820784-30820542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:31857644-31857885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:33306163-33306401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:35642071-35642313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:36782272-36782039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:39405796-39406028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:39598295-39598531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:41000017-40999766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:41225510-41225268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:41620138-41619894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:45245491-45245254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:47843198-47842965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:50302235-50302478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:51427773-51427530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:51822206-51822441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:53353495-53353259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
350-592
               

               
Cow position:
               
chr15:30047493-30047244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr15:8230514-8230284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr15:20459255-20459003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr15:21907988-21908234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
351-503
               

               
Cow position:
               
chr15:31560343-31560196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
351-585
               

               
Cow position:
               
chr15:7456750-7456985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
351-586
               

               
Cow position:
               
chr15:45322835-45323073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 188
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr15:1083322-1083080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr15:10335809-10336048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr15:26158542-26158324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
352-491
               

               
Cow position:
               
chr15:10660500-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
352-505
               

               
Cow position:
               
chr15:5717765-5717918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
352-526
               

               
Cow position:
               
chr15:4418345-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
147, 87
               

               
Conread position:
               
352-528
               

               
Cow position:
               
chr15:9107089-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
352-548
               

               
Cow position:
               
chr15:28823764-28823569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
352-550
               

               
Cow position:
               
chr15:10737689-10737496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr15:53036916-53036715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
87, 161
               

               
Conread position:
               
352-557
               

               
Cow position:
               
chr15:286533-286737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 148
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr15:16543392-16543173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr15:36435260-36435501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr15:5420829-5420590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:1722795-1722558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:11995972-11995732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:12723147-12723379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:16822990-16823230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:26919220-26918980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:29340118-29340355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:50322649-50322888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
353-499
               

               
Cow position:
               
chr15:40379270-40379414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
353-503
               

               
Cow position:
               
chr15:5158430-5158581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
353-532
               

               
Cow position:
               
chr15:10512216-10512036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
353-555
               

               
Cow position:
               
chr15:47280083-47279882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
353-569
               

               
Cow position:
               
chr15:38837805-38838022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
353-570
               

               
Cow position:
               
chr15:85190-84974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
353-577
               

               
Cow position:
               
chr15:608202-608430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
353-581
               

               
Cow position:
               
chr15:32324152-32323922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 227
               

               
Conread position:
               
353-584
               

               
Cow position:
               
chr15:31137410-31137174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-584
               

               
Cow position:
               
chr15:42142915-42143143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
353-585
               

               
Cow position:
               
chr15:36773642-36773406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr15:5535811-5536039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr15:16616242-16616483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 186
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr15:25306601-25306833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr15:35112827-35112599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr15:43914034-43913795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:1301192-1301431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:15041366-15041144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:17233249-17233485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:21821868-21821629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:25667166-25666932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:35839039-35838799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:42415310-42415549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:47990715-47990471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 167
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:52482772-52482536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr15:53164077-53164313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr15:45360-45124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr15:6905589-6905833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr15:27280927-27281156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr15:27863271-27863030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr15:37777404-37777644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 201
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:363081-363311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:2953078-2952836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:6462441-6462209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:7962133-7962370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:10245941-10245714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:14020541-14020764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:15215072-15215313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:16112456-16112698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:17196204-17196438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:18206456-18206219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:21832380-21832131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:21893834-21894075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:22136739-22136975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:22938706-22938484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:23798474-23798227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:24285036-24285278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:24616627-24616860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:26912020-26911786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:27732467-27732691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:30981995-30982209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:33284933-33285175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:37381680-37381924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:37716877-37716628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
99, 77
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:38806446-38806202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:39599499-39599733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:40009598-40009357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:40798371-40798132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:43248719-43248478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:43827716-43827479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:51898284-51898524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr15:52778471-52778236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
354-500
               

               
Cow position:
               
chr15:43673877-43673734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
354-520
               

               
Cow position:
               
chr15:1857781-1857950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr15:43599246-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
354-585
               

               
Cow position:
               
chr15:19403050-19403266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
354-586
               

               
Cow position:
               
chr15:44658417-44658649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
354-588
               

               
Cow position:
               
chr15:25585033-25584798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
354-588
               

               
Cow position:
               
chr15:40095457-40095219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr15:19280031-19279801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr15:39621395-39621630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr15:11646435-11646196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
72, 160
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr15:12785488-12785729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr15:26573436-26573680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr15:32979976-32979741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
355-553
               

               
Cow position:
               
chr15:14856409-14856214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
355-586
               

               
Cow position:
               
chr15:2145078-2144841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
355-590
               

               
Cow position:
               
chr15:21366139-21365904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
356-542
               

               
Cow position:
               
chr15:43788311-43788488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
356-590
               

               
Cow position:
               
chr15:14740626-14740378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
356-590
               

               
Cow position:
               
chr15:36391733-36391965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
356-590
               

               
Cow position:
               
chr15:50341170-50341408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 163
               

               
Conread position:
               
356-594
               

               
Cow position:
               
chr15:23487109-23486873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr15:17100650-17100421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr15:50957740-50957502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
358-486
               

               
Cow position:
               
chr15:35441021-35440886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
358-582
               

               
Cow position:
               
chr15:45584790-45585010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
358-586
               

               
Cow position:
               
chr15:21836740-21836978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
358-589
               

               
Cow position:
               
chr15:5234940-5234712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
358-589
               

               
Cow position:
               
chr15:19771193-19771417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr15:3572643-3572411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr15:5632747-5632965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr15:52740065-52739828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
359-556
               

               
Cow position:
               
chr15:12441763-12441562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr15:144163-143938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr15:22751514-22751744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr15:46610994-46611212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
360-581
               

               
Cow position:
               
chr15:6530785-6530559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
360-590
               

               
Cow position:
               
chr15:21420999-21421235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
360-590
               

               
Cow position:
               
chr15:44256540-44256770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
360-590
               

               
Cow position:
               
chr15:47105104-47105330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 62
               

               
Conread position:
               
363-509
               

               
Cow position:
               
chr15:35205080-35204937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
363-588
               

               
Cow position:
               
chr15:37931698-37931478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr15:20725550-20725321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
365-531
               

               
Cow position:
               
chr15:13684200-13684033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
365-590
               

               
Cow position:
               
chr15:22886615-22886842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
368-588
               

               
Cow position:
               
chr15:4350532-4350309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
369-563
               

               
Cow position:
               
chr15:2522905-2523102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
370-503
               

               
Cow position:
               
chr15:31467134-31467264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
370-539
               

               
Cow position:
               
chr15:5691461-5691624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 47
               

               
Conread position:
               
370-542
               

               
Cow position:
               
chr15:23927401-23927225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
370-561
               

               
Cow position:
               
chr15:23572613-23572415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr15:10845792-10846013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr15:38898496-38898716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
370-589
               

               
Cow position:
               
chr15:5498961-5498737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr15:39859-40077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr15:4501059-4501273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr15:6046243-6046020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 199
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr15:29792832-29792619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr15:34145081-34144862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
371-516
               

               
Cow position:
               
chr15:36725104-36724961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
371-548
               

               
Cow position:
               
chr15:16936774-16936593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr15:17353576-17353357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
372-542
               

               
Cow position:
               
chr15:23775864-23775707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
372-569
               

               
Cow position:
               
chr15:51779149-51779348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
372-588
               

               
Cow position:
               
chr15:17261085-17260865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
372-588
               

               
Cow position:
               
chr15:23702854-23703064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
372-588
               

               
Cow position:
               
chr15:39373360-39373138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
372-589
               

               
Cow position:
               
chr15:31949069-31949292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr15:15573755-15573527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
373-502
               

               
Cow position:
               
chr15:29861398-29861530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
373-586
               

               
Cow position:
               
chr15:53680684-53680479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr15:28126969-28126756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
373-594
               

               
Cow position:
               
chr15:7430054-7430278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
374-582
               

               
Cow position:
               
chr15:26752916-26752727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
376-594
               

               
Cow position:
               
chr15:51632958-51632753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
377-586
               

               
Cow position:
               
chr15:34207114-34206908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
377-588
               

               
Cow position:
               
chr15:49738961-49738756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
377-590
               

               
Cow position:
               
chr15:6586637-6586420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
379-588
               

               
Cow position:
               
chr15:9622271-9622484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
379-589
               

               
Cow position:
               
chr15:11363094-11362890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
379-589
               

               
Cow position:
               
chr15:51460307-51460519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
379-590
               

               
Cow position:
               
chr15:11629804-11629589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
380-585
               

               
Cow position:
               
chr15:7750054-7749849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
380-588
               

               
Cow position:
               
chr15:21522869-21523081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
381-589
               

               
Cow position:
               
chr15:37645067-37645263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
382-590
               

               
Cow position:
               
chr15:36621494-36621711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr15:23598226-23598017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
383-589
               

               
Cow position:
               
chr15:16603905-16604114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
383-589
               

               
Cow position:
               
chr15:16639872-16640076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
158, 29
               

               
Conread position:
               
383-590
               

               
Cow position:
               
chr15:53402905-53402705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
385-590
               

               
Cow position:
               
chr15:22095212-22095414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr15:12316016-12316217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
388-590
               

               
Cow position:
               
chr15:36422749-36422950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
394-590
               

               
Cow position:
               
chr15:20370364-20370170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr15:22531162-22531354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr15:32287655-32287465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
399-590
               

               
Cow position:
               
chr15:33678802-33678988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
403-584
               

               
Cow position:
               
chr15:41583015-41583197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
409-590
               

               
Cow position:
               
chr15:45216929-45217113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
410-590
               

               
Cow position:
               
chr15:22532347-22532534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
411-594
               

               
Cow position:
               
chr15:36346870-36347066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
421-588
               

               
Cow position:
               
chr15:22168179-22168349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
422-590
               

               
Cow position:
               
chr15:7827916-7827747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
422-590
               

               
Cow position:
               
chr15:30001807-30001983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
422-590
               

               
Cow position:
               
chr15:38846225-38846389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
424-590
               

               
Cow position:
               
chr15:5071975-5071807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
424-590
               

               
Cow position:
               
chr15:5571515-5571343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
424-590
               

               
Cow position:
               
chr15:23332752-23332588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
424-590
               

               
Cow position:
               
chr15:24128775-24128942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
432-578
               

               
Cow position:
               
chr15:7535535-7535387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
433-590
               

               
Cow position:
               
chr15:6082511-6082349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
434-588
               

               
Cow position:
               
chr15:19908651-19908804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
437-590
               

               
Cow position:
               
chr15:6168384-6168222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
440-589
               

               
Cow position:
               
chr15:44436874-44437026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
441-590
               

               
Cow position:
               
chr15:34284215-34284068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
443-590
               

               
Cow position:
               
chr15:1128141-1128289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
443-590
               

               
Cow position:
               
chr15:9062450-9062301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
447-590
               

               
Cow position:
               
chr15:47843959-47843814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
453-590
               

               
Cow position:
               
chr15:240998-241140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
456-590
               

               
Cow position:
               
chr15:18284396-18284535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
461-588
               

               
Cow position:
               
chr15:31085700-31085825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
468-578
               

               
Cow position:
               
chr15:13669731-13669622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
468-589
               

               
Cow position:
               
chr15:26896543-26896419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 41
               
Show alignments to all cow chromosomes.