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Cow genome map

           
Conread name:
           
Spl1-SPL010028D01
        

               
Conread position:
               
1-175
               

               
Cow position:
               
chr18:2036570-2036740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
278-491
               

               
Cow position:
               
chr18:46047946-46047730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
278-571
               

               
Cow position:
               
chr18:54056627-54056341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
316-516
               

               
Cow position:
               
chr18:23162923-23162727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
321-589
               

               
Cow position:
               
chr18:2592136-2592408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
322-516
               

               
Cow position:
               
chr18:4556138-4556331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr18:43806483-43806215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
322-591
               

               
Cow position:
               
chr18:1144153-1144432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
323-576
               

               
Cow position:
               
chr18:52584019-52583773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
326-590
               

               
Cow position:
               
chr18:35636319-35636586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
331-590
               

               
Cow position:
               
chr18:55788973-55789228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
337-588
               

               
Cow position:
               
chr18:29648802-29648547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
337-590
               

               
Cow position:
               
chr18:3180429-3180184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
337-590
               

               
Cow position:
               
chr18:4666198-4666449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 9
               

               
Conread position:
               
337-590
               

               
Cow position:
               
chr18:6310099-6309844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chr18:55127847-55127688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chr18:55145039-55145198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
338-590
               

               
Cow position:
               
chr18:45903880-45904128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
123, 7
               

               
Conread position:
               
340-590
               

               
Cow position:
               
chr18:3422713-3422484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
224, 67
               

               
Conread position:
               
345-542
               

               
Cow position:
               
chr18:27637221-27637022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
345-590
               

               
Cow position:
               
chr18:14815337-14815571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
345-590
               

               
Cow position:
               
chr18:33157828-33157585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
346-590
               

               
Cow position:
               
chr18:4368768-4369016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
347-521
               

               
Cow position:
               
chr18:31125218-31125388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
347-575
               

               
Cow position:
               
chr18:21102767-21102990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
347-586
               

               
Cow position:
               
chr18:219345-219100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
347-587
               

               
Cow position:
               
chr18:10977202-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
347-588
               

               
Cow position:
               
chr18:32883313-32883067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr18:30794435-30794198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr18:44262639-44262386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
347-591
               

               
Cow position:
               
chr18:5487251-5487014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
347-594
               

               
Cow position:
               
chr18:13507730-13507972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
348-496
               

               
Cow position:
               
chr18:10214186-10214339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
348-518
               

               
Cow position:
               
chr18:4952201-4952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr18:5766418-5766227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
348-576
               

               
Cow position:
               
chr18:1585108-1585338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr18:267810-268047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
349-533
               

               
Cow position:
               
chr18:43555520-43555704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
349-542
               

               
Cow position:
               
chr18:19896447-19896644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr18:39434830-39434602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
349-584
               

               
Cow position:
               
chr18:51271748-51271970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 81
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr18:11832124-11831904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr18:35012313-35012540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr18:31672508-31672742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:4539878-4540112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:4796976-4796733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:10904854-10904612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:11322600-11322356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:12809859-12809623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:19193361-19193586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:19273092-19273341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 135
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:28101637-28101390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:46452878-46453114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
195, 71
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr18:49100364-49100604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
350-483
               

               
Cow position:
               
chr18:53642744-53642881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
350-491
               

               
Cow position:
               
chr18:22055871-22056018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr18:19688027-19687874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
350-500
               

               
Cow position:
               
chr18:22274834-22274983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr18:5632271-5632115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr18:16997257-16997102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr18:24266404-24266560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
350-505
               

               
Cow position:
               
chr18:51643362-51643518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
350-516
               

               
Cow position:
               
chr18:10117504-10117342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
350-522
               

               
Cow position:
               
chr18:51850557-51850728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
350-526
               

               
Cow position:
               
chr18:51676086-51676268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
350-529
               

               
Cow position:
               
chr18:56190959-56191147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
350-536
               

               
Cow position:
               
chr18:29474747-29474558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 166
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr18:16049895-16050084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr18:16686332-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-545
               

               
Cow position:
               
chr18:346495-346694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
350-550
               

               
Cow position:
               
chr18:27109289-27109493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
350-551
               

               
Cow position:
               
chr18:5072407-5072608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
350-554
               

               
Cow position:
               
chr18:44548909-44549116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
350-556
               

               
Cow position:
               
chr18:7109133-7108923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
350-564
               

               
Cow position:
               
chr18:3211881-3211658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
350-566
               

               
Cow position:
               
chr18:7415028-7415242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
350-571
               

               
Cow position:
               
chr18:47812473-47812253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
350-577
               

               
Cow position:
               
chr18:46436761-46436976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr18:3209729-3209490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
350-581
               

               
Cow position:
               
chr18:1954586-1954823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
350-582
               

               
Cow position:
               
chr18:7951118-7950885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr18:5995473-5995236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr18:3166490-3166719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr18:37023547-37023789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 79
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr18:46048755-46048529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
350-587
               

               
Cow position:
               
chr18:56165984-56165750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:2480659-2480416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:12059003-12058783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:15025676-15025445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:18918955-18919187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:20127102-20127337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:21192410-21192643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:23476684-23476908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:29356621-29356864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:37382090-37382332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:39875256-39875492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:43020401-43020624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr18:47512009-47511761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:9008132-9007913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:13360057-13359825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:20641493-20641720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:22214491-22214252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:25984568-25984808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:40149917-40149686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:51405903-51406139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr18:55692819-55692585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 146
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:3027356-3027602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:3115456-3115223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 72
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:4625891-4625659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:4648744-4648971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:6609855-6610093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:7952642-7952410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
156, 59
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:7965235-7964995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:10322809-10322564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:10656442-10656209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:11684985-11684752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:11691405-11691648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:11867340-11867111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:14048712-14048477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:15880841-15881093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 173
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:17390990-17391210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:17649735-17649972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:18592476-18592236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:20481879-20482110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
191, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:21266509-21266272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
193, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:23766407-23766652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
90, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:25206185-25206428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:25647245-25647486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 163
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:28657908-28658150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:28923844-28924068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:29796425-29796661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:29958161-29958383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:30248133-30248364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:33299907-33299661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:33407620-33407374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:37002635-37002393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:38344809-38344563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:38607232-38607000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:40759210-40758979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:42479583-42479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:45104438-45104683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
94, 153
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:47525411-47525170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:50082254-50082481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:51656039-51656289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:51691459-51691704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:51712699-51712945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:52635067-52635319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
59, 222
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:55499075-55498826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:55552970-55552729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:56183938-56183701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr18:56361600-56361837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
350-591
               

               
Cow position:
               
chr18:43065533-43065272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr18:4758029-4758268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr18:32411010-32411231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr18:56159465-56159224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
351-503
               

               
Cow position:
               
chr18:52855057-52854900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
351-514
               

               
Cow position:
               
chr18:49659880-49660034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
351-542
               

               
Cow position:
               
chr18:8300021-8299825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr18:33008065-33007820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
351-594
               

               
Cow position:
               
chr18:11377367-11377124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
352-571
               

               
Cow position:
               
chr18:18369360-18369578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
352-581
               

               
Cow position:
               
chr18:2863989-2864226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr18:45571015-45570787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr18:48828773-48829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
67, 166
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr18:12023636-12023868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr18:24855842-24856080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr18:50382249-50382022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr18:16417705-16417933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr18:51212185-51211946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 113
               

               
Conread position:
               
352-593
               

               
Cow position:
               
chr18:22411610-22411856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 162
               

               
Conread position:
               
352-594
               

               
Cow position:
               
chr18:55000740-55000982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
185, 74
               

               
Conread position:
               
353-502
               

               
Cow position:
               
chr18:35874078-35873928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
353-518
               

               
Cow position:
               
chr18:37363799-37363637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
353-522
               

               
Cow position:
               
chr18:30586221-30586388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
353-526
               

               
Cow position:
               
chr18:50974294-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-545
               

               
Cow position:
               
chr18:39001803-39001994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
353-552
               

               
Cow position:
               
chr18:23062200-23062398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
353-563
               

               
Cow position:
               
chr18:36183906-36184114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
353-566
               

               
Cow position:
               
chr18:29371867-29371656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
353-584
               

               
Cow position:
               
chr18:4381294-4381062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
353-585
               

               
Cow position:
               
chr18:32121067-32121293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
156, 68
               

               
Conread position:
               
353-585
               

               
Cow position:
               
chr18:39662779-39662554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr18:19646175-19645942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
190, 77
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr18:35777956-35777726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
353-587
               

               
Cow position:
               
chr18:3158597-3158835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:7359745-7359500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:14586470-14586711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:16044151-16044388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:18961835-18962074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:24957301-24957062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:28768366-28768132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr18:36098212-36097966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 167
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr18:4516030-4515792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr18:22120885-22121117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr18:51757094-51756862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:247688-247920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:1495304-1495069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:4182187-4182427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:4495886-4496124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:4668499-4668728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:16227557-16227325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:16842058-16842302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 164
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:17005260-17005014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:20271019-20271256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:34021389-34021154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:43822950-43823189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr18:48453688-48453457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
353-594
               

               
Cow position:
               
chr18:55589485-55589715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr18:55747685-55747506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
354-562
               

               
Cow position:
               
chr18:39623799-39623590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
354-587
               

               
Cow position:
               
chr18:7947389-7947152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr18:19363935-19363696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr18:26355029-26355268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr18:47517216-47517444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr18:9974329-9974562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
195, 81
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr18:20174130-20174366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
355-586
               

               
Cow position:
               
chr18:2270500-2270736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
355-586
               

               
Cow position:
               
chr18:43283758-43283990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
355-588
               

               
Cow position:
               
chr18:32873590-32873349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
355-591
               

               
Cow position:
               
chr18:42455023-42455262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 158
               

               
Conread position:
               
356-586
               

               
Cow position:
               
chr18:601179-601406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
356-588
               

               
Cow position:
               
chr18:29649689-29649926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
356-589
               

               
Cow position:
               
chr18:7487247-7487021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
187, 52
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr18:8104945-8105180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr18:25282557-25282791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
358-581
               

               
Cow position:
               
chr18:4673303-4673087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
358-581
               

               
Cow position:
               
chr18:51392646-51392873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
143, 17
               

               
Conread position:
               
358-587
               

               
Cow position:
               
chr18:33896428-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
358-588
               

               
Cow position:
               
chr18:15340451-15340674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:2608730-2608965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:4857898-4858144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 222
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:21205359-21205130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:35797619-35797388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:36458929-36458698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:42747587-42747359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr18:56172015-56172256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr18:3044443-3044194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr18:21195347-21195574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr18:24945811-24946049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
360-531
               

               
Cow position:
               
chr18:10861436-10861615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
361-590
               

               
Cow position:
               
chr18:53538798-53539045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
363-589
               

               
Cow position:
               
chr18:24022378-24022145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 175
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr18:33606621-33606396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr18:35537240-35537465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
363-590
               

               
Cow position:
               
chr18:56181471-56181691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
364-575
               

               
Cow position:
               
chr18:18815678-18815894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
364-590
               

               
Cow position:
               
chr18:11680713-11680484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
365-590
               

               
Cow position:
               
chr18:10576093-10575872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
370-531
               

               
Cow position:
               
chr18:9066681-9066521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
370-542
               

               
Cow position:
               
chr18:35886868-35886690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr18:56150660-56150890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
370-589
               

               
Cow position:
               
chr18:3098338-3098549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
370-589
               

               
Cow position:
               
chr18:45573091-45572877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
169, 47
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:6290766-6290548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:19849770-19849987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:29388205-29387990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:34621377-34621603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:35582114-35582338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 143
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:39709868-39709654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:49161453-49161692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr18:52632424-52632640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
370-591
               

               
Cow position:
               
chr18:14085447-14085223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
370-593
               

               
Cow position:
               
chr18:36750452-36750247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
370-594
               

               
Cow position:
               
chr18:19831293-19831057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr18:20998641-20998854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr18:55397292-55397069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
372-533
               

               
Cow position:
               
chr18:7970353-7970188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
372-588
               

               
Cow position:
               
chr18:13631971-13632185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr18:38985674-38985451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr18:18562556-18562772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr18:35827432-35827649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
373-589
               

               
Cow position:
               
chr18:14871890-14872101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
373-589
               

               
Cow position:
               
chr18:34527118-34527337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr18:4707301-4707524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr18:11166961-11166743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr18:11183922-11183705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr18:52658392-52658185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
374-582
               

               
Cow position:
               
chr18:1582291-1582511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
374-585
               

               
Cow position:
               
chr18:1859239-1859451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
374-589
               

               
Cow position:
               
chr18:41271065-41270855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
167, 43
               

               
Conread position:
               
374-590
               

               
Cow position:
               
chr18:5578288-5578066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
375-497
               

               
Cow position:
               
chr18:48242168-48242045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
375-590
               

               
Cow position:
               
chr18:42966844-42966618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
376-589
               

               
Cow position:
               
chr18:31586393-31586600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
376-590
               

               
Cow position:
               
chr18:33793681-33793472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
377-577
               

               
Cow position:
               
chr18:13876525-13876715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
146, 26
               

               
Conread position:
               
377-586
               

               
Cow position:
               
chr18:28822993-28823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
377-588
               

               
Cow position:
               
chr18:19761675-19761464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
377-590
               

               
Cow position:
               
chr18:47314304-47314530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
377-594
               

               
Cow position:
               
chr18:47868441-47868215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
378-567
               

               
Cow position:
               
chr18:18868730-18868530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
378-581
               

               
Cow position:
               
chr18:16847670-16847461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
379-584
               

               
Cow position:
               
chr18:18957826-18958021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
379-590
               

               
Cow position:
               
chr18:26586683-26586900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
380-588
               

               
Cow position:
               
chr18:23807887-23808107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
380-588
               

               
Cow position:
               
chr18:35076366-35076152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
380-590
               

               
Cow position:
               
chr18:48290466-48290674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
382-576
               

               
Cow position:
               
chr18:53962663-53962461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
383-589
               

               
Cow position:
               
chr18:51443460-51443666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
383-590
               

               
Cow position:
               
chr18:30673671-30673877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
384-586
               

               
Cow position:
               
chr18:49665182-49665384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
384-589
               

               
Cow position:
               
chr18:31724907-31725123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
384-590
               

               
Cow position:
               
chr18:52382673-52382462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 156
               

               
Conread position:
               
385-590
               

               
Cow position:
               
chr18:4316280-4316071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
385-590
               

               
Cow position:
               
chr18:7059190-7058994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr18:5247545-5247755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
387-590
               

               
Cow position:
               
chr18:25626988-25626788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
394-594
               

               
Cow position:
               
chr18:2569750-2569561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
397-584
               

               
Cow position:
               
chr18:55715891-55716078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr18:26286868-26286675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
399-590
               

               
Cow position:
               
chr18:19619910-19619712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
402-573
               

               
Cow position:
               
chr18:29188968-29188790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
409-590
               

               
Cow position:
               
chr18:35058287-35058104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
410-590
               

               
Cow position:
               
chr18:20864937-20864747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
411-588
               

               
Cow position:
               
chr18:36445385-36445198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
414-588
               

               
Cow position:
               
chr18:18627379-18627561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
414-590
               

               
Cow position:
               
chr18:23447139-23447318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
416-586
               

               
Cow position:
               
chr18:56167979-56168152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
418-594
               

               
Cow position:
               
chr18:5189749-5189931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
421-590
               

               
Cow position:
               
chr18:49543410-49543242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
422-589
               

               
Cow position:
               
chr18:24636435-24636279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
423-588
               

               
Cow position:
               
chr18:47930931-47931094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
425-590
               

               
Cow position:
               
chr18:21768563-21768391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
425-590
               

               
Cow position:
               
chr18:24342549-24342390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
429-590
               

               
Cow position:
               
chr18:51178824-51178982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
430-590
               

               
Cow position:
               
chr18:9818765-9818600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
432-590
               

               
Cow position:
               
chr18:11233358-11233195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
436-588
               

               
Cow position:
               
chr18:56192672-56192825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
438-586
               

               
Cow position:
               
chr18:32244105-32244247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
440-590
               

               
Cow position:
               
chr18:5647161-5647010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
440-590
               

               
Cow position:
               
chr18:27388466-27388313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
442-594
               

               
Cow position:
               
chr18:48407704-48407549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
445-588
               

               
Cow position:
               
chr18:5711759-5711901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
445-589
               

               
Cow position:
               
chr18:39115231-39115379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
445-590
               

               
Cow position:
               
chr18:35908532-35908387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
447-590
               

               
Cow position:
               
chr18:13172610-13172758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
458-588
               

               
Cow position:
               
chr18:2354795-2354660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
463-590
               

               
Cow position:
               
chr18:2099462-2099589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
463-590
               

               
Cow position:
               
chr18:56163477-56163351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
464-586
               

               
Cow position:
               
chr18:1733304-1733424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
466-590
               

               
Cow position:
               
chr18:11811863-11811742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
467-590
               

               
Cow position:
               
chr18:33882770-33882894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
470-589
               

               
Cow position:
               
chr18:15172915-15172797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
477-590
               

               
Cow position:
               
chr18:52402640-52402754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
478-589
               

               
Cow position:
               
chr18:11695153-11695044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 32
               
Show alignments to all cow chromosomes.