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Cow genome map

           
Conread name:
           
Spl1-SPL010028D01
        

               
Conread position:
               
59-590
               

               
Cow position:
               
chr24:39493600-39493069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
389, 374
               

               
Conread position:
               
278-570
               

               
Cow position:
               
chr24:41301788-41302076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
279-577
               

               
Cow position:
               
chr24:20446657-20446361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
281-448
               

               
Cow position:
               
chr24:21208103-21208266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
316-583
               

               
Cow position:
               
chr24:16510023-16509751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
316-590
               

               
Cow position:
               
chr24:25885113-25885386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr24:11887197-11886929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
325-565
               

               
Cow position:
               
chr24:6131834-6132080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
331-590
               

               
Cow position:
               
chr24:27040079-27039810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
331-590
               

               
Cow position:
               
chr24:33372584-33372322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
113, 6
               

               
Conread position:
               
337-587
               

               
Cow position:
               
chr24:31036375-31036132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
337-590
               

               
Cow position:
               
chr24:15246619-15246863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
338-590
               

               
Cow position:
               
chr24:43927307-43927550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
340-521
               

               
Cow position:
               
chr24:5683302-5683119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
340-590
               

               
Cow position:
               
chr24:39227019-39226770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
341-531
               

               
Cow position:
               
chr24:35576515-35576704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
345-590
               

               
Cow position:
               
chr24:15057416-15057174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
346-590
               

               
Cow position:
               
chr24:17159766-17159518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
347-493
               

               
Cow position:
               
chr24:27418084-27418230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
347-503
               

               
Cow position:
               
chr24:28234060-28233907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
347-542
               

               
Cow position:
               
chr24:32070979-32070786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
347-549
               

               
Cow position:
               
chr24:41423621-41423422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
347-584
               

               
Cow position:
               
chr24:6102845-6102600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
347-586
               

               
Cow position:
               
chr24:21519444-21519215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
347-587
               

               
Cow position:
               
chr24:43200256-43200498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
347-588
               

               
Cow position:
               
chr24:30235888-30235643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
347-589
               

               
Cow position:
               
chr24:27052479-27052722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr24:15508526-15508763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr24:17311202-17311437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr24:24755465-24755221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
347-594
               

               
Cow position:
               
chr24:201619-201867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
348-589
               

               
Cow position:
               
chr24:20943182-20942942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr24:20225754-20225509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr24:27267641-27267407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
162, 64
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr24:34533129-34532895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 64
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr24:35074107-35073864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
349-486
               

               
Cow position:
               
chr24:39523436-39523572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
349-504
               

               
Cow position:
               
chr24:24662118-24662272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
349-539
               

               
Cow position:
               
chr24:18357039-18357230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 133
               

               
Conread position:
               
349-556
               

               
Cow position:
               
chr24:44987362-44987577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
349-566
               

               
Cow position:
               
chr24:39143625-39143400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr24:39833502-39833732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr24:3430746-3430509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr24:30178254-30178010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr24:32204782-32205021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
349-589
               

               
Cow position:
               
chr24:43364374-43364136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr24:3493897-3493664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr24:18331731-18331509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr24:29782178-29781933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr24:37650687-37650442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 165
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr24:41755875-41755634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr24:44040992-44041237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 203
               

               
Conread position:
               
350-536
               

               
Cow position:
               
chr24:19736322-19736502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
350-538
               

               
Cow position:
               
chr24:39808147-39807963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr24:29587012-29586811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
350-545
               

               
Cow position:
               
chr24:16895425-16895619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
350-554
               

               
Cow position:
               
chr24:27726000-27726205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 163
               

               
Conread position:
               
350-556
               

               
Cow position:
               
chr24:28599848-28600057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr24:16089240-16089041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
350-564
               

               
Cow position:
               
chr24:32124626-32124837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr24:28990573-28990358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
350-573
               

               
Cow position:
               
chr24:28253719-28253495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
350-575
               

               
Cow position:
               
chr24:10125886-10125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
350-577
               

               
Cow position:
               
chr24:15373417-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
350-577
               

               
Cow position:
               
chr24:16645308-16645537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
99, 189
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr24:33465606-33465817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr24:31359333-31359099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr24:5141954-5141716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr24:31324297-31324055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:2675327-2675103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:2970593-2970833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:10012764-10012546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:16268117-16268330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:18344075-18343822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:18374780-18374548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:27906450-27906208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:30483936-30484170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:31812201-31811958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr24:33944413-33944181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:211999-211754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:2095870-2096116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:3152565-3152804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:6487931-6487693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
191, 67
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:27874607-27874377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:28496570-28496814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:32054673-32054445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:33153788-33153555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:34410654-34410430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:34742765-34742521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:814249-814493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:2402356-2402605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:5754848-5754613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:7917349-7917597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:8886922-8886688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:11840199-11839950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:18484982-18485228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 163
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:19465905-19466162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:19769501-19769270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:20024625-20024379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:20249884-20250132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:25425056-25424835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:26732463-26732219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:27290883-27290647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:27608086-27608326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:27844516-27844748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:28303353-28303577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:28319197-28319428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:28690697-28690472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 52
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:28721900-28721659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:29595797-29596044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:29673534-29673291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:29679298-29679539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:30229485-30229240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:30314014-30314264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 166
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:31816590-31816357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
191, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:32693731-32693474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 159
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:33221928-33222168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:36404130-36404376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:38814979-38814743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:40130141-40129894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:41068272-41068040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:42344985-42345237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
350-591
               

               
Cow position:
               
chr24:7914018-7913769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
350-591
               

               
Cow position:
               
chr24:45004959-45004725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 142
               

               
Conread position:
               
350-593
               

               
Cow position:
               
chr24:21918216-21918449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr24:17104558-17104798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr24:27341008-27341256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr24:33098461-33098720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 215
               

               
Conread position:
               
351-542
               

               
Cow position:
               
chr24:14171679-14171874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
351-589
               

               
Cow position:
               
chr24:32758749-32758991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr24:43432801-43432573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
352-554
               

               
Cow position:
               
chr24:18970498-18970697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
352-578
               

               
Cow position:
               
chr24:17434627-17434400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr24:3165828-3165595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 135
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr24:17955434-17955673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:10499225-10498982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:17860248-17860479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 113
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:19535246-19535476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:25229053-25229286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:32369905-32370138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:35794725-35794968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr24:41980649-41980893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
353-502
               

               
Cow position:
               
chr24:38006699-38006846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
353-526
               

               
Cow position:
               
chr24:17752103-17752277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
353-540
               

               
Cow position:
               
chr24:18017236-18017051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
353-542
               

               
Cow position:
               
chr24:19000056-18999867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
353-542
               

               
Cow position:
               
chr24:27054420-27054227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 161
               

               
Conread position:
               
353-545
               

               
Cow position:
               
chr24:19800856-19800661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-569
               

               
Cow position:
               
chr24:7476344-7476557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
353-570
               

               
Cow position:
               
chr24:352597-352813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
353-574
               

               
Cow position:
               
chr24:20801337-20801556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
353-578
               

               
Cow position:
               
chr24:22079472-22079240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
353-582
               

               
Cow position:
               
chr24:6140942-6141184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr24:21768653-21768418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr24:15473367-15473129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr24:26928935-26929175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr24:31159628-31159403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr24:32609656-32609412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr24:41986005-41985750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr24:42825489-42825724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
188, 67
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr24:24457241-24457474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 62
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr24:39350207-39350434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:5651985-5652205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:23556329-23556559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
190, 68
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:25194274-25194038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:25320994-25320761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:28553545-28553773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:29170972-29170737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
156, 69
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:30544853-30545084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 49
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:33723837-33724079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:35150531-35150301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:35332734-35332490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:37246213-37246446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:39440559-39440785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr24:40592720-40592492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
354-519
               

               
Cow position:
               
chr24:28289245-28289405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
354-539
               

               
Cow position:
               
chr24:12200401-12200590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
354-574
               

               
Cow position:
               
chr24:34008565-34008793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
354-577
               

               
Cow position:
               
chr24:5633023-5633252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
354-588
               

               
Cow position:
               
chr24:22263536-22263307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
354-588
               

               
Cow position:
               
chr24:38347682-38347454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr24:18405302-18405536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr24:19179430-19179673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr24:28700060-28699829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr24:32822763-32823011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr24:34565131-34564898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr24:39955042-39955274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
188, 63
               

               
Conread position:
               
355-578
               

               
Cow position:
               
chr24:250571-250793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
355-588
               

               
Cow position:
               
chr24:34761900-34761667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
355-589
               

               
Cow position:
               
chr24:18741565-18741798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
355-590
               

               
Cow position:
               
chr24:20874689-20874448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 78
               

               
Conread position:
               
356-557
               

               
Cow position:
               
chr24:29359995-29360195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
356-582
               

               
Cow position:
               
chr24:34396173-34396394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
356-585
               

               
Cow position:
               
chr24:36173777-36174006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
356-587
               

               
Cow position:
               
chr24:27096696-27096460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
356-588
               

               
Cow position:
               
chr24:10841201-10841442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
356-588
               

               
Cow position:
               
chr24:22095424-22095194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
358-570
               

               
Cow position:
               
chr24:18786912-18787127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
358-575
               

               
Cow position:
               
chr24:5694-5911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr24:6507762-6507992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
90, 106
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr24:39681860-39681627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr24:40091572-40091800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
359-565
               

               
Cow position:
               
chr24:34782783-34782990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
359-588
               

               
Cow position:
               
chr24:6160086-6160311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
359-588
               

               
Cow position:
               
chr24:23685063-23685287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr24:18266159-18266400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
361-569
               

               
Cow position:
               
chr24:15707441-15707650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
361-572
               

               
Cow position:
               
chr24:43635439-43635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
361-590
               

               
Cow position:
               
chr24:24250732-24250504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 152
               

               
Conread position:
               
361-590
               

               
Cow position:
               
chr24:39218839-39219075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
362-590
               

               
Cow position:
               
chr24:15861598-15861829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
363-588
               

               
Cow position:
               
chr24:9070440-9070660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
365-584
               

               
Cow position:
               
chr24:36554836-36555052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
366-590
               

               
Cow position:
               
chr24:39259157-39258936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
220, 115
               

               
Conread position:
               
367-588
               

               
Cow position:
               
chr24:35405569-35405797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
367-590
               

               
Cow position:
               
chr24:27824457-27824236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
368-590
               

               
Cow position:
               
chr24:28354149-28353923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
370-542
               

               
Cow position:
               
chr24:27202592-27202417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
370-553
               

               
Cow position:
               
chr24:17832823-17833004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
370-568
               

               
Cow position:
               
chr24:885696-885889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
370-584
               

               
Cow position:
               
chr24:36486073-36486284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
370-586
               

               
Cow position:
               
chr24:42103366-42103149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr24:5152227-5152005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr24:17294198-17294415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
66, 172
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr24:18695611-18695393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr24:27719768-27719981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr24:34315348-34315129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr24:40184616-40184395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
371-589
               

               
Cow position:
               
chr24:40850153-40849931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr24:6154804-6154596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr24:18390301-18390517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
372-522
               

               
Cow position:
               
chr24:27552884-27552735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
372-526
               

               
Cow position:
               
chr24:6450495-6450332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
372-542
               

               
Cow position:
               
chr24:10300073-10299903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
372-587
               

               
Cow position:
               
chr24:22225171-22224952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
372-589
               

               
Cow position:
               
chr24:17363658-17363876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
372-589
               

               
Cow position:
               
chr24:18975193-18974973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
372-589
               

               
Cow position:
               
chr24:42007730-42007518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr24:16625496-16625729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
373-503
               

               
Cow position:
               
chr24:29013237-29013107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
373-578
               

               
Cow position:
               
chr24:42420652-42420862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr24:24136872-24137079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
373-590
               

               
Cow position:
               
chr24:31382890-31382680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr24:30226928-30226749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
374-590
               

               
Cow position:
               
chr24:18771197-18771415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
374-590
               

               
Cow position:
               
chr24:19658532-19658320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
376-554
               

               
Cow position:
               
chr24:40984149-40983971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
377-565
               

               
Cow position:
               
chr24:29707809-29708007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
377-585
               

               
Cow position:
               
chr24:6160860-6161070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
377-588
               

               
Cow position:
               
chr24:27149384-27149171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
377-590
               

               
Cow position:
               
chr24:16994867-16994665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
379-590
               

               
Cow position:
               
chr24:11876871-11876655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
380-590
               

               
Cow position:
               
chr24:28062931-28062717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
380-590
               

               
Cow position:
               
chr24:39483460-39483245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
380-593
               

               
Cow position:
               
chr24:29028023-29027815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
382-590
               

               
Cow position:
               
chr24:27207215-27207423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr24:21860243-21860447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
393-590
               

               
Cow position:
               
chr24:33238573-33238776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr24:6340979-6340789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr24:40055765-40055950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
410-538
               

               
Cow position:
               
chr24:25092488-25092354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
413-578
               

               
Cow position:
               
chr24:29539957-29540127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
417-576
               

               
Cow position:
               
chr24:34579013-34579180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
422-590
               

               
Cow position:
               
chr24:14279835-14279660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
422-590
               

               
Cow position:
               
chr24:27810130-27809954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
423-588
               

               
Cow position:
               
chr24:31388474-31388308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
426-588
               

               
Cow position:
               
chr24:27941070-27941234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
430-590
               

               
Cow position:
               
chr24:18324557-18324388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
431-590
               

               
Cow position:
               
chr24:20969865-20970020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
432-590
               

               
Cow position:
               
chr24:21264575-21264739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
436-594
               

               
Cow position:
               
chr24:5435115-5435279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr24:18734430-18734582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
440-590
               

               
Cow position:
               
chr24:11007141-11006987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
443-588
               

               
Cow position:
               
chr24:30776747-30776894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
443-589
               

               
Cow position:
               
chr24:18474827-18474975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
443-589
               

               
Cow position:
               
chr24:27543558-27543703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
444-588
               

               
Cow position:
               
chr24:2730652-2730796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-590
               

               
Cow position:
               
chr24:25950749-25950895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
444-590
               

               
Cow position:
               
chr24:38375202-38375056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
445-588
               

               
Cow position:
               
chr24:27465661-27465796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
445-589
               

               
Cow position:
               
chr24:18732205-18732350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
460-590
               

               
Cow position:
               
chr24:6900728-6900596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
465-588
               

               
Cow position:
               
chr24:29606170-29606293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
474-590
               

               
Cow position:
               
chr24:19804578-19804459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
478-590
               

               
Cow position:
               
chr24:6741962-6742077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               
Show alignments to all cow chromosomes.