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Cow genome map

           
Conread name:
           
Spl1-SPL010028D01
        

               
Conread position:
               
223-588
               

               
Cow position:
               
chr27:28164610-28164253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
219, 202
               

               
Conread position:
               
278-503
               

               
Cow position:
               
chr27:26979870-26979634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
315-539
               

               
Cow position:
               
chr27:16625785-16626006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
322-498
               

               
Cow position:
               
chr27:22225700-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 5
               

               
Conread position:
               
322-583
               

               
Cow position:
               
chr27:7731365-7731095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr27:15454103-15454372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 5
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr27:18558253-18558524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr27:22171192-22171459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
322-590
               

               
Cow position:
               
chr27:30914902-30915162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
324-590
               

               
Cow position:
               
chr27:24321082-24321350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
332-594
               

               
Cow position:
               
chr27:13875630-13875899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
345-590
               

               
Cow position:
               
chr27:26424671-26424425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
347-542
               

               
Cow position:
               
chr27:20901488-20901674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
158, 70
               

               
Conread position:
               
347-562
               

               
Cow position:
               
chr27:16103724-16103936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
347-571
               

               
Cow position:
               
chr27:17331413-17331644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
100, 166
               

               
Conread position:
               
347-588
               

               
Cow position:
               
chr27:6550378-6550609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
347-589
               

               
Cow position:
               
chr27:26509240-26508997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr27:23483141-23483383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
347-590
               

               
Cow position:
               
chr27:25277057-25277297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
347-594
               

               
Cow position:
               
chr27:23632514-23632766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
347-594
               

               
Cow position:
               
chr27:25783538-25783767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
348-497
               

               
Cow position:
               
chr27:20514737-20514889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
348-538
               

               
Cow position:
               
chr27:20078782-20078975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
348-588
               

               
Cow position:
               
chr27:22547482-22547246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr27:9169727-9169484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr27:18593187-18593431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr27:25809601-25809362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr27:28206716-28206958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr27:17646249-17646089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 72
               

               
Conread position:
               
349-548
               

               
Cow position:
               
chr27:24371161-24371353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
349-553
               

               
Cow position:
               
chr27:27442250-27442047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
349-554
               

               
Cow position:
               
chr27:20552859-20552636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
349-578
               

               
Cow position:
               
chr27:715420-715652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr27:1122951-1123185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
349-585
               

               
Cow position:
               
chr27:23890857-23891093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
349-586
               

               
Cow position:
               
chr27:12429326-12429565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:1290932-1290704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:15668852-15668606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:18507569-18507792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:20037197-20036968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:22418847-22418604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:28018256-28018497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:29831778-29831526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
349-590
               

               
Cow position:
               
chr27:30872137-30871899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
349-594
               

               
Cow position:
               
chr27:26413335-26413091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
350-491
               

               
Cow position:
               
chr27:20812825-20812967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
350-491
               

               
Cow position:
               
chr27:21975973-21976111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
350-491
               

               
Cow position:
               
chr27:28260615-28260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
350-497
               

               
Cow position:
               
chr27:20085485-20085632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
350-497
               

               
Cow position:
               
chr27:26111995-26111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr27:15215150-15215307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr27:16088724-16088883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
350-512
               

               
Cow position:
               
chr27:15865527-15865690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
350-536
               

               
Cow position:
               
chr27:8263417-8263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr27:26919991-26919790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr27:30389378-30389184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr27:1637015-1636829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 63
               

               
Conread position:
               
350-545
               

               
Cow position:
               
chr27:26226370-26226175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
350-570
               

               
Cow position:
               
chr27:20789459-20789239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 162
               

               
Conread position:
               
350-575
               

               
Cow position:
               
chr27:20247884-20247658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
350-577
               

               
Cow position:
               
chr27:28467530-28467291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr27:26489988-26489753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
350-578
               

               
Cow position:
               
chr27:28271230-28270998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
350-583
               

               
Cow position:
               
chr27:27136600-27136371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
350-584
               

               
Cow position:
               
chr27:15319376-15319606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
350-584
               

               
Cow position:
               
chr27:22735671-22735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
350-584
               

               
Cow position:
               
chr27:25379909-25380145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 164
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr27:19660852-19661097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 230
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr27:28001892-28001662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr27:29039021-29038789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr27:30359327-30359554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr27:12246574-12246815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
350-587
               

               
Cow position:
               
chr27:22426912-22426671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:2683225-2682985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:10992274-10992512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:21351102-21350857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:22454855-22454623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:24014819-24014582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:24477337-24477575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:27641092-27640833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr27:28518216-28518444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:4672933-4673180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:6499981-6500224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:16780786-16781024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
88, 162
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:19685793-19685555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:30582654-30582897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 189
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr27:30764951-30765191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 191
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:3817-4048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
199, 31
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:536383-536618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:815282-815525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:1058757-1058519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:1353503-1353745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
62, 213
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:1768703-1768475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:4386141-4385906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:4835686-4835447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 97
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:6541552-6541785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:7935236-7935003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:8062430-8062196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:8353396-8353637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:10979783-10980024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:11536185-11535936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
108, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:13639063-13638832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:14670462-14670220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 92
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:15409116-15408883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:16284395-16284633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
194, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:16705171-16705407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:17397534-17397286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:17472728-17472973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:19648022-19647781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:19717835-19718084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:20795710-20795944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:21453174-21452909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:21669197-21668964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:22035457-22035213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:22723773-22723546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:23128380-23128615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:23472176-23472416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:24999820-24999574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:26238945-26239185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:26959694-26959460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:28496452-28496214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:30354424-30354183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr27:30988717-30988958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
350-591
               

               
Cow position:
               
chr27:27270622-27270376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr27:26428212-26427964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
350-594
               

               
Cow position:
               
chr27:30868820-30868574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
351-545
               

               
Cow position:
               
chr27:26581515-26581320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
351-586
               

               
Cow position:
               
chr27:11273498-11273725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr27:4812962-4812716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr27:20553653-20553877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr27:26218623-26218859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
352-534
               

               
Cow position:
               
chr27:20497128-20497318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
352-536
               

               
Cow position:
               
chr27:4858717-4858540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr27:8962335-8962111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr27:23554407-23554161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr27:299459-299223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr27:2592465-2592702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
67, 183
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr27:20068053-20067818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr27:21393585-21393344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr27:28931871-28931627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr27:30550917-30551156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
353-540
               

               
Cow position:
               
chr27:19500310-19500124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
353-542
               

               
Cow position:
               
chr27:30672635-30672451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
353-548
               

               
Cow position:
               
chr27:11151592-11151795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
353-548
               

               
Cow position:
               
chr27:15925269-15925461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
353-554
               

               
Cow position:
               
chr27:23545406-23545195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
353-556
               

               
Cow position:
               
chr27:8168507-8168303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
353-574
               

               
Cow position:
               
chr27:29816697-29816477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
353-582
               

               
Cow position:
               
chr27:15866142-15866376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
353-582
               

               
Cow position:
               
chr27:27512710-27512943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr27:10582296-10582519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr27:22603102-22603319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 64
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr27:31373060-31372823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:11412651-11412879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
157, 57
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:16786752-16786985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:20354513-20354738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:21978212-21977979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:24331644-24331884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:27844075-27843834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
88, 141
               

               
Conread position:
               
353-588
               

               
Cow position:
               
chr27:30374645-30374412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr27:732498-732731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr27:11435399-11435169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
353-589
               

               
Cow position:
               
chr27:11480713-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:706873-707108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:10307377-10307135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:12596693-12596919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:13197828-13198077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:13318051-13317794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:14937507-14937268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 159
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:19546591-19546342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 161
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:19668884-19668628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:23070436-23070199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:26380249-26380018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:28921969-28921736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
353-590
               

               
Cow position:
               
chr27:29184914-29184682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
354-588
               

               
Cow position:
               
chr27:18739301-18739546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr27:8571117-8570875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr27:13841293-13841537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
355-538
               

               
Cow position:
               
chr27:13274230-13274046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
355-588
               

               
Cow position:
               
chr27:6787881-6788117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
355-588
               

               
Cow position:
               
chr27:15204304-15204073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
167, 66
               

               
Conread position:
               
355-588
               

               
Cow position:
               
chr27:29798879-29799102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
355-589
               

               
Cow position:
               
chr27:20045817-20046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
355-590
               

               
Cow position:
               
chr27:15643098-15643336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
356-504
               

               
Cow position:
               
chr27:6925011-6925164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
356-589
               

               
Cow position:
               
chr27:21408637-21408393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
357-554
               

               
Cow position:
               
chr27:6350913-6350704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
357-586
               

               
Cow position:
               
chr27:19577597-19577831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr27:22440069-22440300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
184, 63
               

               
Conread position:
               
358-526
               

               
Cow position:
               
chr27:22559899-22559725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
358-552
               

               
Cow position:
               
chr27:26141698-26141898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
358-586
               

               
Cow position:
               
chr27:19896685-19896913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
358-589
               

               
Cow position:
               
chr27:11255453-11255672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr27:13005771-13005995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr27:24446229-24445996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr27:27038913-27038683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
358-590
               

               
Cow position:
               
chr27:27040530-27040768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
359-503
               

               
Cow position:
               
chr27:18491769-18491921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
359-554
               

               
Cow position:
               
chr27:7538148-7537948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
359-589
               

               
Cow position:
               
chr27:6522973-6523205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
359-590
               

               
Cow position:
               
chr27:21569911-21569683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
360-542
               

               
Cow position:
               
chr27:30260959-30260783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
360-544
               

               
Cow position:
               
chr27:29380783-29380971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
360-590
               

               
Cow position:
               
chr27:29283478-29283248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
361-590
               

               
Cow position:
               
chr27:30362177-30362404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
363-536
               

               
Cow position:
               
chr27:20570054-20570228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
363-589
               

               
Cow position:
               
chr27:31147736-31147514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
364-583
               

               
Cow position:
               
chr27:18543926-18544150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
365-590
               

               
Cow position:
               
chr27:28038405-28038177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
368-588
               

               
Cow position:
               
chr27:26807622-26807405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
370-503
               

               
Cow position:
               
chr27:1565486-1565352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
370-505
               

               
Cow position:
               
chr27:26236559-26236695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
370-532
               

               
Cow position:
               
chr27:26135077-26135239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
370-538
               

               
Cow position:
               
chr27:16237849-16238013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
370-541
               

               
Cow position:
               
chr27:31148701-31148871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
370-552
               

               
Cow position:
               
chr27:16275722-16275552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
370-553
               

               
Cow position:
               
chr27:10395319-10395134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
370-578
               

               
Cow position:
               
chr27:27460631-27460423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
370-586
               

               
Cow position:
               
chr27:27550794-27550591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
370-587
               

               
Cow position:
               
chr27:8292061-8291854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
370-587
               

               
Cow position:
               
chr27:14343515-14343310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr27:14902713-14902490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr27:31499010-31499226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr27:2957345-2957568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr27:6058443-6058663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr27:8942744-8942523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr27:22268441-22268665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
370-590
               

               
Cow position:
               
chr27:27141542-27141754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr27:13251953-13252170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr27:27438563-27438344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
371-590
               

               
Cow position:
               
chr27:27554739-27554526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
372-588
               

               
Cow position:
               
chr27:4819763-4819552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
372-588
               

               
Cow position:
               
chr27:19496826-19497033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
372-589
               

               
Cow position:
               
chr27:19387960-19388178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr27:24227851-24227633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr27:25790746-25790964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr27:27259556-27259769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr27:27856275-27856494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
372-590
               

               
Cow position:
               
chr27:29431406-29431621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
172, 54
               

               
Conread position:
               
373-579
               

               
Cow position:
               
chr27:4011622-4011823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
373-583
               

               
Cow position:
               
chr27:30890234-30890444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
373-593
               

               
Cow position:
               
chr27:1183941-1183713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 216
               

               
Conread position:
               
374-545
               

               
Cow position:
               
chr27:29236522-29236696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
374-590
               

               
Cow position:
               
chr27:29250824-29251040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
374-590
               

               
Cow position:
               
chr27:30670684-30670898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
375-590
               

               
Cow position:
               
chr27:9090854-9090641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
376-525
               

               
Cow position:
               
chr27:4482910-4482762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
376-590
               

               
Cow position:
               
chr27:30407091-30406871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
377-586
               

               
Cow position:
               
chr27:23882427-23882217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
377-589
               

               
Cow position:
               
chr27:15867343-15867550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
377-590
               

               
Cow position:
               
chr27:1498262-1498474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
377-590
               

               
Cow position:
               
chr27:20543893-20544104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
154, 44
               

               
Conread position:
               
377-590
               

               
Cow position:
               
chr27:26398311-26398098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
378-590
               

               
Cow position:
               
chr27:29515904-29515700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
378-594
               

               
Cow position:
               
chr27:19589423-19589640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
379-588
               

               
Cow position:
               
chr27:24725790-24725576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
379-590
               

               
Cow position:
               
chr27:12516142-12516359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
380-542
               

               
Cow position:
               
chr27:22154007-22154169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
380-586
               

               
Cow position:
               
chr27:154313-154525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
380-586
               

               
Cow position:
               
chr27:25411571-25411363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
380-588
               

               
Cow position:
               
chr27:23929925-23930123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
380-589
               

               
Cow position:
               
chr27:4829854-4829648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
381-588
               

               
Cow position:
               
chr27:30844127-30843920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
382-590
               

               
Cow position:
               
chr27:16871964-16871755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
383-534
               

               
Cow position:
               
chr27:22386821-22386974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
383-589
               

               
Cow position:
               
chr27:22330720-22330510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
386-581
               

               
Cow position:
               
chr27:28190258-28190066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
386-590
               

               
Cow position:
               
chr27:27020150-27019940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
389-590
               

               
Cow position:
               
chr27:1884009-1884197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
390-588
               

               
Cow position:
               
chr27:15859129-15858932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
397-578
               

               
Cow position:
               
chr27:27684154-27683968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
398-590
               

               
Cow position:
               
chr27:20591948-20592144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
401-590
               

               
Cow position:
               
chr27:17926651-17926476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
407-588
               

               
Cow position:
               
chr27:27003298-27003123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
408-586
               

               
Cow position:
               
chr27:31231111-31230937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
408-590
               

               
Cow position:
               
chr27:7412361-7412543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
410-590
               

               
Cow position:
               
chr27:26885273-26885093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
412-573
               

               
Cow position:
               
chr27:29399794-29399958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
422-589
               

               
Cow position:
               
chr27:22498546-22498712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
423-590
               

               
Cow position:
               
chr27:18434480-18434310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
440-590
               

               
Cow position:
               
chr27:16619999-16620152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
440-590
               

               
Cow position:
               
chr27:27055585-27055738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
442-584
               

               
Cow position:
               
chr27:13376016-13375877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
443-589
               

               
Cow position:
               
chr27:8629859-8629712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
444-590
               

               
Cow position:
               
chr27:22771766-22771918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
447-572
               

               
Cow position:
               
chr27:16589697-16589570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
447-589
               

               
Cow position:
               
chr27:6073936-6074076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
448-590
               

               
Cow position:
               
chr27:18031044-18030896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
448-590
               

               
Cow position:
               
chr27:22179775-22179637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
464-582
               

               
Cow position:
               
chr27:28009026-28008904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
467-590
               

               
Cow position:
               
chr27:20803480-20803604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
467-590
               

               
Cow position:
               
chr27:21419031-21418906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
467-590
               

               
Cow position:
               
chr27:26322388-26322514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
468-587
               

               
Cow position:
               
chr27:6674276-6674398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
469-590
               

               
Cow position:
               
chr27:26625165-26625285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
470-594
               

               
Cow position:
               
chr27:18922491-18922615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 40
               
Show alignments to all cow chromosomes.