Non-Coding RNA Search

Cow genome map


           Conread name:
           Spl1-SPL010028D01
        

               Conread position:
               279-588
               

               Cow position:
               chr3:48530714-48530412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               282-586
               

               Cow position:
               chr3:8147590-8147888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               309-590
               

               Cow position:
               chr3:59630461-59630726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               310-522
               

               Cow position:
               chr3:9638324-9638530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 27
               

               Conread position:
               316-588
               

               Cow position:
               chr3:5374374-5374108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 11
               

               Conread position:
               317-502
               

               Cow position:
               chr3:22221372-22221180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               317-581
               

               Cow position:
               chr3:43307483-43307754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               321-586
               

               Cow position:
               chr3:45279507-45279237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               322-542
               

               Cow position:
               chr3:20677802-20678014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               322-542
               

               Cow position:
               chr3:70762083-70762302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               322-556
               

               Cow position:
               chr3:24352900-24352668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               322-589
               

               Cow position:
               chr3:65413238-65413502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               323-589
               

               Cow position:
               chr3:57764258-57763997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               218, 14
               

               Conread position:
               333-579
               

               Cow position:
               chr3:25477833-25477596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               208, 12
               

               Conread position:
               337-590
               

               Cow position:
               chr3:41328466-41328228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               337-590
               

               Cow position:
               chr3:79292855-79292607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               339-589
               

               Cow position:
               chr3:39969840-39970098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               101, 175
               

               Conread position:
               339-590
               

               Cow position:
               chr3:83201502-83201755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               341-577
               

               Cow position:
               chr3:83845937-83845690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 180
               

               Conread position:
               341-590
               

               Cow position:
               chr3:56059832-56059580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               75, 173
               

               Conread position:
               341-590
               

               Cow position:
               chr3:61857531-61857269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               345-542
               

               Cow position:
               chr3:75045858-75046054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               345-579
               

               Cow position:
               chr3:76713305-76713538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               346-531
               

               Cow position:
               chr3:23037604-23037798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               346-586
               

               Cow position:
               chr3:24939209-24939449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               346-589
               

               Cow position:
               chr3:69961699-69961937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 72
               

               Conread position:
               346-590
               

               Cow position:
               chr3:77227339-77227091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               106, 12
               

               Conread position:
               347-526
               

               Cow position:
               chr3:29360131-29360303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               102, 65
               

               Conread position:
               347-536
               

               Cow position:
               chr3:24615828-24616010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               347-556
               

               Cow position:
               chr3:49218299-49218508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               97, 74
               

               Conread position:
               347-572
               

               Cow position:
               chr3:61169819-61169593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               347-584
               

               Cow position:
               chr3:16656477-16656702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               196, 11
               

               Conread position:
               347-585
               

               Cow position:
               chr3:59000738-59000968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               347-588
               

               Cow position:
               chr3:48296716-48296484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               347-589
               

               Cow position:
               chr3:13353379-13353131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               347-590
               

               Cow position:
               chr3:56359-56598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 81
               

               Conread position:
               347-590
               

               Cow position:
               chr3:3032422-3032168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               347-590
               

               Cow position:
               chr3:7331108-7331344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               197, 70
               

               Conread position:
               347-590
               

               Cow position:
               chr3:8061144-8060905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 160
               

               Conread position:
               347-590
               

               Cow position:
               chr3:10347369-10347128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               347-590
               

               Cow position:
               chr3:17447597-17447835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               347-590
               

               Cow position:
               chr3:27544324-27544556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               347-590
               

               Cow position:
               chr3:38347208-38346974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               151, 62
               

               Conread position:
               347-590
               

               Cow position:
               chr3:48241632-48241394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               347-590
               

               Cow position:
               chr3:60597559-60597321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               347-590
               

               Cow position:
               chr3:61144112-61143866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               347-590
               

               Cow position:
               chr3:73443074-73443314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               347-590
               

               Cow position:
               chr3:75480018-75479785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 86
               

               Conread position:
               347-591
               

               Cow position:
               chr3:67930168-67930405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               348-520
               

               Cow position:
               chr3:8733341-8733513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               348-536
               

               Cow position:
               chr3:31850359-31850543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               348-577
               

               Cow position:
               chr3:12287247-12287020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               348-585
               

               Cow position:
               chr3:68707995-68708230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               195, 16
               

               Conread position:
               348-588
               

               Cow position:
               chr3:27940125-27940353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               348-589
               

               Cow position:
               chr3:42178171-42177932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               348-590
               

               Cow position:
               chr3:7678673-7678444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               348-590
               

               Cow position:
               chr3:34270931-34270702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               348-590
               

               Cow position:
               chr3:52652067-52652301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               100, 73
               

               Conread position:
               348-590
               

               Cow position:
               chr3:53046645-53046884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 107
               

               Conread position:
               348-590
               

               Cow position:
               chr3:66609830-66610065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               348-590
               

               Cow position:
               chr3:69849493-69849729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               96, 62
               

               Conread position:
               348-590
               

               Cow position:
               chr3:73764181-73764423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               348-590
               

               Cow position:
               chr3:75057116-75057346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               348-590
               

               Cow position:
               chr3:82056101-82056345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               348-594
               

               Cow position:
               chr3:61840293-61840058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 82
               

               Conread position:
               349-504
               

               Cow position:
               chr3:61323338-61323191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               349-542
               

               Cow position:
               chr3:57274072-57273887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 9
               

               Conread position:
               349-542
               

               Cow position:
               chr3:74502312-74502501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               150, 68
               

               Conread position:
               349-565
               

               Cow position:
               chr3:7940539-7940758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               5, 42
               

               Conread position:
               349-578
               

               Cow position:
               chr3:78896660-78896433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               349-585
               

               Cow position:
               chr3:83215275-83215031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               349-586
               

               Cow position:
               chr3:50768692-50768455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               192, 68
               

               Conread position:
               349-586
               

               Cow position:
               chr3:59691904-59691681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               349-586
               

               Cow position:
               chr3:71238167-71237933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               349-586
               

               Cow position:
               chr3:83491099-83490853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               349-588
               

               Cow position:
               chr3:23444875-23445115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 211
               

               Conread position:
               349-588
               

               Cow position:
               chr3:43528219-43528462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               349-588
               

               Cow position:
               chr3:57754463-57754709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               99, 80
               

               Conread position:
               349-588
               

               Cow position:
               chr3:63179870-63179643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               150, 59
               

               Conread position:
               349-588
               

               Cow position:
               chr3:80564979-80564735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               349-589
               

               Cow position:
               chr3:66292163-66292405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 81
               

               Conread position:
               349-590
               

               Cow position:
               chr3:13899434-13899680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 67
               

               Conread position:
               349-590
               

               Cow position:
               chr3:14263406-14263165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               349-590
               

               Cow position:
               chr3:14632970-14633214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               93, 134
               

               Conread position:
               349-590
               

               Cow position:
               chr3:23471446-23471695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               349-590
               

               Cow position:
               chr3:32585163-32584931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 93
               

               Conread position:
               349-590
               

               Cow position:
               chr3:48851957-48852195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               152, 51
               

               Conread position:
               349-590
               

               Cow position:
               chr3:55189741-55189978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               349-590
               

               Cow position:
               chr3:59799261-59799027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               349-590
               

               Cow position:
               chr3:60892638-60892405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               349-594
               

               Cow position:
               chr3:53592676-53592932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 57
               

               Conread position:
               350-463
               

               Cow position:
               chr3:14547014-14546902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               350-470
               

               Cow position:
               chr3:55984111-55983986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               350-495
               

               Cow position:
               chr3:84175811-84175959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-503
               

               Cow position:
               chr3:3889555-3889708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               350-503
               

               Cow position:
               chr3:20993825-20993670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               350-503
               

               Cow position:
               chr3:21014946-21015101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               350-503
               

               Cow position:
               chr3:34871579-34871427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 67
               

               Conread position:
               350-503
               

               Cow position:
               chr3:73820357-73820511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               350-503
               

               Cow position:
               chr3:80468664-80468816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               350-505
               

               Cow position:
               chr3:74846697-74846854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               350-508
               

               Cow position:
               chr3:17235199-17235355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               350-516
               

               Cow position:
               chr3:46541817-46541981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               350-518
               

               Cow position:
               chr3:24935377-24935215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               87, 66
               

               Conread position:
               350-519
               

               Cow position:
               chr3:32184006-32184177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               350-522
               

               Cow position:
               chr3:58973308-58973144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               350-522
               

               Cow position:
               chr3:59035052-59034874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               350-527
               

               Cow position:
               chr3:59884057-59884237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               350-530
               

               Cow position:
               chr3:30222203-30222018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               350-530
               

               Cow position:
               chr3:55109601-55109782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               350-531
               

               Cow position:
               chr3:15992730-15992546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 163
               

               Conread position:
               350-531
               

               Cow position:
               chr3:48810633-48810805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               350-531
               

               Cow position:
               chr3:54100714-54100891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               350-538
               

               Cow position:
               chr3:26489068-26489259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-538
               

               Cow position:
               chr3:26739402-26739595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               350-538
               

               Cow position:
               chr3:55819770-55819572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               350-539
               

               Cow position:
               chr3:19792917-19792716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               350-539
               

               Cow position:
               chr3:35153629-35153445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               350-540
               

               Cow position:
               chr3:15153703-15153513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 114
               

               Conread position:
               350-540
               

               Cow position:
               chr3:43727091-43726902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               350-540
               

               Cow position:
               chr3:54506719-54506532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 116
               

               Conread position:
               350-540
               

               Cow position:
               chr3:62046676-62046485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               350-541
               

               Cow position:
               chr3:3913430-3913629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 83
               

               Conread position:
               350-541
               

               Cow position:
               chr3:81507099-81507290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-542
               

               Cow position:
               chr3:5365689-5365492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               99, 65
               

               Conread position:
               350-544
               

               Cow position:
               chr3:76922651-76922844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               350-544
               

               Cow position:
               chr3:81359095-81359294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               350-545
               

               Cow position:
               chr3:26982070-26981882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 47
               

               Conread position:
               350-545
               

               Cow position:
               chr3:68587035-68586841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 72
               

               Conread position:
               350-545
               

               Cow position:
               chr3:76267963-76268164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               94, 178
               

               Conread position:
               350-553
               

               Cow position:
               chr3:34669721-34669918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               350-554
               

               Cow position:
               chr3:18686918-18686716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               99, 62
               

               Conread position:
               350-556
               

               Cow position:
               chr3:4050205-4050002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               350-556
               

               Cow position:
               chr3:36446706-36446910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 80
               

               Conread position:
               350-556
               

               Cow position:
               chr3:53094919-53095129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-556
               

               Cow position:
               chr3:70632033-70631825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 151
               

               Conread position:
               350-567
               

               Cow position:
               chr3:63269235-63269023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               350-568
               

               Cow position:
               chr3:55712452-55712220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               350-568
               

               Cow position:
               chr3:57760510-57760293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               350-575
               

               Cow position:
               chr3:36375528-36375760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               350-575
               

               Cow position:
               chr3:55318885-55319110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               350-576
               

               Cow position:
               chr3:4319723-4319497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-577
               

               Cow position:
               chr3:70565726-70565952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               350-577
               

               Cow position:
               chr3:74878577-74878804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               350-578
               

               Cow position:
               chr3:23105350-23105581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 163
               

               Conread position:
               350-578
               

               Cow position:
               chr3:25945105-25944862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               350-578
               

               Cow position:
               chr3:46006006-46006246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               350-578
               

               Cow position:
               chr3:49327956-49327722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               350-578
               

               Cow position:
               chr3:80072141-80071901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               350-579
               

               Cow position:
               chr3:13301838-13302068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               350-579
               

               Cow position:
               chr3:44837364-44837595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               350-579
               

               Cow position:
               chr3:70609644-70609406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 165
               

               Conread position:
               350-582
               

               Cow position:
               chr3:1830561-1830783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               350-582
               

               Cow position:
               chr3:33698743-33698502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 80
               

               Conread position:
               350-582
               

               Cow position:
               chr3:48252897-48252671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               95, 83
               

               Conread position:
               350-583
               

               Cow position:
               chr3:45211313-45211075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               350-584
               

               Cow position:
               chr3:22907716-22907938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               350-584
               

               Cow position:
               chr3:42423314-42423552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               67, 86
               

               Conread position:
               350-584
               

               Cow position:
               chr3:73395128-73394895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 27
               

               Conread position:
               350-585
               

               Cow position:
               chr3:2198895-2198660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               92, 58
               

               Conread position:
               350-585
               

               Cow position:
               chr3:14465694-14465930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 154
               

               Conread position:
               350-586
               

               Cow position:
               chr3:11711977-11711729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               350-586
               

               Cow position:
               chr3:12711903-12712146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               350-586
               

               Cow position:
               chr3:15655134-15655375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               350-586
               

               Cow position:
               chr3:17934926-17935146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               350-586
               

               Cow position:
               chr3:18725632-18725858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               160, 57
               

               Conread position:
               350-586
               

               Cow position:
               chr3:23448125-23448354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 80
               

               Conread position:
               350-586
               

               Cow position:
               chr3:62826606-62826846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               350-586
               

               Cow position:
               chr3:62998995-62999228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               350-586
               

               Cow position:
               chr3:73709059-73708825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               350-586
               

               Cow position:
               chr3:78092499-78092733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               191, 83
               

               Conread position:
               350-588
               

               Cow position:
               chr3:14625378-14625612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               350-588
               

               Cow position:
               chr3:15954073-15954302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-588
               

               Cow position:
               chr3:17936827-17937064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 72
               

               Conread position:
               350-588
               

               Cow position:
               chr3:20129947-20129717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               151, 67
               

               Conread position:
               350-588
               

               Cow position:
               chr3:22820584-22820344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               91, 163
               

               Conread position:
               350-588
               

               Cow position:
               chr3:26553703-26553937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               350-588
               

               Cow position:
               chr3:29507594-29507371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               350-588
               

               Cow position:
               chr3:30180098-30179858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               44, 188
               

               Conread position:
               350-588
               

               Cow position:
               chr3:31206888-31206647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               350-588
               

               Cow position:
               chr3:33327721-33327479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 73
               

               Conread position:
               350-588
               

               Cow position:
               chr3:35852459-35852693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               350-588
               

               Cow position:
               chr3:42367498-42367724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 59
               

               Conread position:
               350-588
               

               Cow position:
               chr3:49460914-49461162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               350-588
               

               Cow position:
               chr3:53113187-53112944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               98, 66
               

               Conread position:
               350-588
               

               Cow position:
               chr3:64172452-64172220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               220, 59
               

               Conread position:
               350-588
               

               Cow position:
               chr3:64280918-64281161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               350-589
               

               Cow position:
               chr3:5850917-5851154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 82
               

               Conread position:
               350-589
               

               Cow position:
               chr3:8717254-8717019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 67
               

               Conread position:
               350-589
               

               Cow position:
               chr3:50614653-50614413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               92, 163
               

               Conread position:
               350-589
               

               Cow position:
               chr3:59621636-59621862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               350-589
               

               Cow position:
               chr3:60933429-60933189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               152, 76
               

               Conread position:
               350-589
               

               Cow position:
               chr3:70334683-70334928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               93, 69
               

               Conread position:
               350-589
               

               Cow position:
               chr3:77225131-77224894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               89, 145
               

               Conread position:
               350-589
               

               Cow position:
               chr3:79591879-79592115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr3:188884-188632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               350-590
               

               Cow position:
               chr3:210331-210096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               98, 73
               

               Conread position:
               350-590
               

               Cow position:
               chr3:2216380-2216132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               98, 83
               

               Conread position:
               350-590
               

               Cow position:
               chr3:2506466-2506708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               350-590
               

               Cow position:
               chr3:2675041-2674802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               350-590
               

               Cow position:
               chr3:4457059-4457303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               350-590
               

               Cow position:
               chr3:5097219-5096977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:5416208-5416458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 96
               

               Conread position:
               350-590
               

               Cow position:
               chr3:6690012-6689767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 62
               

               Conread position:
               350-590
               

               Cow position:
               chr3:7337770-7338001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               191, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:7566405-7566646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 117
               

               Conread position:
               350-590
               

               Cow position:
               chr3:8393362-8393119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:9641579-9641337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 82
               

               Conread position:
               350-590
               

               Cow position:
               chr3:14601699-14601941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr3:15051936-15052172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 72
               

               Conread position:
               350-590
               

               Cow position:
               chr3:15228811-15229046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               111, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:16752246-16752480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               350-590
               

               Cow position:
               chr3:17222130-17222371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               70, 160
               

               Conread position:
               350-590
               

               Cow position:
               chr3:17957479-17957239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:18067151-18066907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               350-590
               

               Cow position:
               chr3:18459516-18459747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 50
               

               Conread position:
               350-590
               

               Cow position:
               chr3:19006672-19006440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               350-590
               

               Cow position:
               chr3:19404316-19404096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               350-590
               

               Cow position:
               chr3:20437644-20437873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 64
               

               Conread position:
               350-590
               

               Cow position:
               chr3:21081364-21081613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               350-590
               

               Cow position:
               chr3:21340949-21341191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               350-590
               

               Cow position:
               chr3:21547088-21547329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               160, 83
               

               Conread position:
               350-590
               

               Cow position:
               chr3:23169054-23169297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               350-590
               

               Cow position:
               chr3:25690805-25690558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               350-590
               

               Cow position:
               chr3:26066010-26065774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               350-590
               

               Cow position:
               chr3:26219039-26219289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               350-590
               

               Cow position:
               chr3:26904122-26903888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               350-590
               

               Cow position:
               chr3:27274543-27274306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               350-590
               

               Cow position:
               chr3:27289951-27289710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               350-590
               

               Cow position:
               chr3:28908191-28908422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:29596402-29596167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               172, 63
               

               Conread position:
               350-590
               

               Cow position:
               chr3:29807475-29807235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               350-590
               

               Cow position:
               chr3:30008896-30009137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               350-590
               

               Cow position:
               chr3:37041431-37041200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               350-590
               

               Cow position:
               chr3:44932528-44932281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               350-590
               

               Cow position:
               chr3:45647692-45647449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               350-590
               

               Cow position:
               chr3:46350685-46350432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               350-590
               

               Cow position:
               chr3:49482704-49482936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               350-590
               

               Cow position:
               chr3:49650400-49650152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 82
               

               Conread position:
               350-590
               

               Cow position:
               chr3:51234084-51234323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               350-590
               

               Cow position:
               chr3:51578309-51578548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               350-590
               

               Cow position:
               chr3:53222025-53221787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               350-590
               

               Cow position:
               chr3:53384268-53384510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 135
               

               Conread position:
               350-590
               

               Cow position:
               chr3:53572740-53572977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               350-590
               

               Cow position:
               chr3:53739173-53739417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:54434988-54434746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               350-590
               

               Cow position:
               chr3:54739871-54740099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               350-590
               

               Cow position:
               chr3:55085157-55085411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               350-590
               

               Cow position:
               chr3:55272033-55272270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               97, 82
               

               Conread position:
               350-590
               

               Cow position:
               chr3:58767275-58767052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               350-590
               

               Cow position:
               chr3:58968891-58969123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 75
               

               Conread position:
               350-590
               

               Cow position:
               chr3:59333783-59333540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               350-590
               

               Cow position:
               chr3:59610706-59610951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 162
               

               Conread position:
               350-590
               

               Cow position:
               chr3:61278921-61278679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               136, 27
               

               Conread position:
               350-590
               

               Cow position:
               chr3:61539818-61539569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:65237036-65236798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr3:66375332-66375094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               350-590
               

               Cow position:
               chr3:66900721-66900969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               350-590
               

               Cow position:
               chr3:67744616-67744855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               350-590
               

               Cow position:
               chr3:70401909-70401675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 60
               

               Conread position:
               350-590
               

               Cow position:
               chr3:71231408-71231179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               350-590
               

               Cow position:
               chr3:71430192-71430439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               99, 83
               

               Conread position:
               350-590
               

               Cow position:
               chr3:71497126-71497372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               78, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:72019131-72018892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 197
               

               Conread position:
               350-590
               

               Cow position:
               chr3:72676103-72675860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               92, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:74088167-74088401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               98, 65
               

               Conread position:
               350-590
               

               Cow position:
               chr3:74500255-74499997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 85
               

               Conread position:
               350-590
               

               Cow position:
               chr3:74533361-74533121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               191, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr3:75050605-75050845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 130
               

               Conread position:
               350-590
               

               Cow position:
               chr3:75080775-75080539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:76015304-76015072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               112, 83
               

               Conread position:
               350-590
               

               Cow position:
               chr3:77271265-77271494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               350-590
               

               Cow position:
               chr3:77365278-77365521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               350-590
               

               Cow position:
               chr3:78077197-78076962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr3:79148273-79148503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               151, 59
               

               Conread position:
               350-590
               

               Cow position:
               chr3:79220870-79220623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr3:79902508-79902276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               152, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr3:80053529-80053761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               350-590
               

               Cow position:
               chr3:82461191-82460957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               350-591
               

               Cow position:
               chr3:45881910-45881681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               350-593
               

               Cow position:
               chr3:57624476-57624237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-594
               

               Cow position:
               chr3:2025210-2024953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               19, 208
               

               Conread position:
               350-594
               

               Cow position:
               chr3:46901211-46900963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               350-594
               

               Cow position:
               chr3:67704558-67704309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 163
               

               Conread position:
               350-594
               

               Cow position:
               chr3:81277686-81277934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 71
               

               Conread position:
               351-589
               

               Cow position:
               chr3:26920919-26920670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               351-590
               

               Cow position:
               chr3:83815776-83816020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 66
               

               Conread position:
               352-495
               

               Cow position:
               chr3:54551872-54552014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               352-556
               

               Cow position:
               chr3:3638195-3637993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               352-582
               

               Cow position:
               chr3:59649267-59649039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 80
               

               Conread position:
               352-588
               

               Cow position:
               chr3:525356-525129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 50
               

               Conread position:
               352-588
               

               Cow position:
               chr3:8393949-8393714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               352-588
               

               Cow position:
               chr3:58540520-58540758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               92, 12
               

               Conread position:
               352-588
               

               Cow position:
               chr3:74134714-74134480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               352-589
               

               Cow position:
               chr3:116199-115980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               352-589
               

               Cow position:
               chr3:31046941-31047175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               352-589
               

               Cow position:
               chr3:38864135-38863891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 167
               

               Conread position:
               352-589
               

               Cow position:
               chr3:56476692-56476456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               352-589
               

               Cow position:
               chr3:71247035-71246810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               91, 69
               

               Conread position:
               352-589
               

               Cow position:
               chr3:75158371-75158139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               352-590
               

               Cow position:
               chr3:14552885-14552651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               352-590
               

               Cow position:
               chr3:16157686-16157453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 56
               

               Conread position:
               352-590
               

               Cow position:
               chr3:18393383-18393611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               352-590
               

               Cow position:
               chr3:20674864-20675106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               352-590
               

               Cow position:
               chr3:25755034-25754809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 68
               

               Conread position:
               352-590
               

               Cow position:
               chr3:33252879-33253108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               153, 70
               

               Conread position:
               352-590
               

               Cow position:
               chr3:37599418-37599643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               352-590
               

               Cow position:
               chr3:38691396-38691633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               23, 67
               

               Conread position:
               352-590
               

               Cow position:
               chr3:42489291-42489537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               352-590
               

               Cow position:
               chr3:45534283-45534527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 82
               

               Conread position:
               352-590
               

               Cow position:
               chr3:54946141-54945897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 81
               

               Conread position:
               352-590
               

               Cow position:
               chr3:59474132-59473885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               352-590
               

               Cow position:
               chr3:63332819-63332583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               147, 22
               

               Conread position:
               352-590
               

               Cow position:
               chr3:65969177-65968927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               352-590
               

               Cow position:
               chr3:75570442-75570669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               150, 57
               

               Conread position:
               352-590
               

               Cow position:
               chr3:83921200-83920971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               352-594
               

               Cow position:
               chr3:73759506-73759751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               352-594
               

               Cow position:
               chr3:74234196-74233964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               213, 44
               

               Conread position:
               353-494
               

               Cow position:
               chr3:22510036-22509894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               353-503
               

               Cow position:
               chr3:1517503-1517655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               353-503
               

               Cow position:
               chr3:71238484-71238332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 69
               

               Conread position:
               353-521
               

               Cow position:
               chr3:77582118-77581950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               353-540
               

               Cow position:
               chr3:15751704-15751899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               353-542
               

               Cow position:
               chr3:53318410-53318224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               353-542
               

               Cow position:
               chr3:75853319-75853510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               353-549
               

               Cow position:
               chr3:75687428-75687625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               353-551
               

               Cow position:
               chr3:24872720-24872531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               353-556
               

               Cow position:
               chr3:53875756-53875952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               353-556
               

               Cow position:
               chr3:66883931-66884134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               91, 68
               

               Conread position:
               353-557
               

               Cow position:
               chr3:44101977-44101775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               353-562
               

               Cow position:
               chr3:38828768-38828563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               171, 47
               

               Conread position:
               353-567
               

               Cow position:
               chr3:59451603-59451384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               353-569
               

               Cow position:
               chr3:27696969-27697189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               147, 64
               

               Conread position:
               353-570
               

               Cow position:
               chr3:7661865-7661643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               353-578
               

               Cow position:
               chr3:35005785-35005562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 60
               

               Conread position:
               353-579
               

               Cow position:
               chr3:12255490-12255258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 150
               

               Conread position:
               353-581
               

               Cow position:
               chr3:39328409-39328182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 176
               

               Conread position:
               353-582
               

               Cow position:
               chr3:48363085-48362862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               186, 68
               

               Conread position:
               353-586
               

               Cow position:
               chr3:31309345-31309578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               353-586
               

               Cow position:
               chr3:74699373-74699619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 166
               

               Conread position:
               353-586
               

               Cow position:
               chr3:76172660-76172887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               353-587
               

               Cow position:
               chr3:11987338-11987106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               353-587
               

               Cow position:
               chr3:29891400-29891641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               353-587
               

               Cow position:
               chr3:43571757-43571516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               353-588
               

               Cow position:
               chr3:7763665-7763439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               181, 64
               

               Conread position:
               353-588
               

               Cow position:
               chr3:15388228-15387986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 69
               

               Conread position:
               353-588
               

               Cow position:
               chr3:22089268-22089507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               353-588
               

               Cow position:
               chr3:36570036-36570275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               353-588
               

               Cow position:
               chr3:39066341-39066108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               353-588
               

               Cow position:
               chr3:49679141-49678897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               353-588
               

               Cow position:
               chr3:63316141-63315906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               188, 78
               

               Conread position:
               353-588
               

               Cow position:
               chr3:71161808-71161569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               67, 11
               

               Conread position:
               353-588
               

               Cow position:
               chr3:72473924-72473682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               90, 59
               

               Conread position:
               353-588
               

               Cow position:
               chr3:77188447-77188217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               353-588
               

               Cow position:
               chr3:83474754-83474522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               353-589
               

               Cow position:
               chr3:23091966-23092209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               353-589
               

               Cow position:
               chr3:45648144-45647913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 80
               

               Conread position:
               353-589
               

               Cow position:
               chr3:59588523-59588293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               353-589
               

               Cow position:
               chr3:61171499-61171736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               353-589
               

               Cow position:
               chr3:65800601-65800367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 134
               

               Conread position:
               353-590
               

               Cow position:
               chr3:5100763-5100988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               353-590
               

               Cow position:
               chr3:8457664-8457428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               353-590
               

               Cow position:
               chr3:9663163-9663414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               353-590
               

               Cow position:
               chr3:15192595-15192337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               353-590
               

               Cow position:
               chr3:16333806-16333579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               87, 59
               

               Conread position:
               353-590
               

               Cow position:
               chr3:17456259-17456496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               96, 70
               

               Conread position:
               353-590
               

               Cow position:
               chr3:19708095-19708329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               353-590
               

               Cow position:
               chr3:20471355-20471587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               353-590
               

               Cow position:
               chr3:27532645-27532889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               353-590
               

               Cow position:
               chr3:28898214-28898450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               104, 64
               

               Conread position:
               353-590
               

               Cow position:
               chr3:30463163-30463393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               353-590
               

               Cow position:
               chr3:48629580-48629812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               353-590
               

               Cow position:
               chr3:49382958-49382725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               156, 53
               

               Conread position:
               353-590
               

               Cow position:
               chr3:52608191-52607956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               191, 83
               

               Conread position:
               353-590
               

               Cow position:
               chr3:52863175-52863412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               353-590
               

               Cow position:
               chr3:53270839-53270599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               88, 70
               

               Conread position:
               353-590
               

               Cow position:
               chr3:53790527-53790768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               353-590
               

               Cow position:
               chr3:53910117-53909886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               148, 22
               

               Conread position:
               353-590
               

               Cow position:
               chr3:55106430-55106670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               148, 64
               

               Conread position:
               353-590
               

               Cow position:
               chr3:55970516-55970277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               353-590
               

               Cow position:
               chr3:56582857-56582616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               353-590
               

               Cow position:
               chr3:57577706-57577467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               353-590
               

               Cow position:
               chr3:59366563-59366320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               353-590
               

               Cow position:
               chr3:65058707-65058474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               353-590
               

               Cow position:
               chr3:67543860-67544101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               90, 43
               

               Conread position:
               353-590
               

               Cow position:
               chr3:67929251-67929495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               91, 53
               

               Conread position:
               353-590
               

               Cow position:
               chr3:68145834-68146063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               353-590
               

               Cow position:
               chr3:68582995-68583230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               353-590
               

               Cow position:
               chr3:72391091-72390853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               353-590
               

               Cow position:
               chr3:74119420-74119673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               353-590
               

               Cow position:
               chr3:79884477-79884714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               146, 24
               

               Conread position:
               353-590
               

               Cow position:
               chr3:80081804-80082045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               353-590
               

               Cow position:
               chr3:80581671-80581444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               353-594
               

               Cow position:
               chr3:2680525-2680280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               354-585
               

               Cow position:
               chr3:23877005-23876776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               354-588
               

               Cow position:
               chr3:74620981-74621222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 78
               

               Conread position:
               354-590
               

               Cow position:
               chr3:14626142-14626379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               354-590
               

               Cow position:
               chr3:39661448-39661677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               354-590
               

               Cow position:
               chr3:45524275-45524037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 202
               

               Conread position:
               354-590
               

               Cow position:
               chr3:52017779-52017530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               354-590
               

               Cow position:
               chr3:55124272-55124505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               354-590
               

               Cow position:
               chr3:55947592-55947348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               354-590
               

               Cow position:
               chr3:59392110-59392337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               148, 62
               

               Conread position:
               354-590
               

               Cow position:
               chr3:70899899-70899673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               354-590
               

               Cow position:
               chr3:80740574-80740345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               355-517
               

               Cow position:
               chr3:19793583-19793747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 62
               

               Conread position:
               355-560
               

               Cow position:
               chr3:38035583-38035794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               355-561
               

               Cow position:
               chr3:49790805-49791011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 46
               

               Conread position:
               355-585
               

               Cow position:
               chr3:59515111-59514889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               355-589
               

               Cow position:
               chr3:26960581-26960821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               355-590
               

               Cow position:
               chr3:15684914-15685144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               188, 126
               

               Conread position:
               355-590
               

               Cow position:
               chr3:36671984-36672230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               355-590
               

               Cow position:
               chr3:42594645-42594884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               355-590
               

               Cow position:
               chr3:55460489-55460728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               356-590
               

               Cow position:
               chr3:43233512-43233276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 61
               

               Conread position:
               356-590
               

               Cow position:
               chr3:81471090-81471328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               357-526
               

               Cow position:
               chr3:77729461-77729289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               357-590
               

               Cow position:
               chr3:9843592-9843356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               358-535
               

               Cow position:
               chr3:23920425-23920602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               358-564
               

               Cow position:
               chr3:14598951-14598745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               358-589
               

               Cow position:
               chr3:17450935-17451160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               186, 75
               

               Conread position:
               358-589
               

               Cow position:
               chr3:44861303-44861534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 37
               

               Conread position:
               358-590
               

               Cow position:
               chr3:17895848-17895627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               358-590
               

               Cow position:
               chr3:48269869-48269636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               90, 130
               

               Conread position:
               358-590
               

               Cow position:
               chr3:52650524-52650760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               86, 76
               

               Conread position:
               358-590
               

               Cow position:
               chr3:74611572-74611336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               90, 150
               

               Conread position:
               358-590
               

               Cow position:
               chr3:84000617-84000385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               359-570
               

               Cow position:
               chr3:83707970-83708174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               359-576
               

               Cow position:
               chr3:21693954-21693728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               359-584
               

               Cow position:
               chr3:70896047-70895825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               182, 62
               

               Conread position:
               359-588
               

               Cow position:
               chr3:18763893-18763669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               147, 33
               

               Conread position:
               359-590
               

               Cow position:
               chr3:16362732-16362965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               361-583
               

               Cow position:
               chr3:15859665-15859891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               361-590
               

               Cow position:
               chr3:4031975-4031741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               362-556
               

               Cow position:
               chr3:34176624-34176429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               362-590
               

               Cow position:
               chr3:364212-364446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               363-577
               

               Cow position:
               chr3:62790009-62790234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 9
               

               Conread position:
               363-585
               

               Cow position:
               chr3:68881117-68881338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 54
               

               Conread position:
               363-589
               

               Cow position:
               chr3:17695003-17695231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 70
               

               Conread position:
               365-586
               

               Cow position:
               chr3:35975115-35975328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 5
               

               Conread position:
               365-588
               

               Cow position:
               chr3:30358636-30358859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               365-590
               

               Cow position:
               chr3:4332362-4332136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               367-503
               

               Cow position:
               chr3:1534621-1534761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               368-536
               

               Cow position:
               chr3:15232025-15231857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               368-577
               

               Cow position:
               chr3:3062562-3062348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 136
               

               Conread position:
               368-590
               

               Cow position:
               chr3:22232656-22232870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               370-512
               

               Cow position:
               chr3:15790547-15790411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               370-531
               

               Cow position:
               chr3:53192434-53192590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               370-556
               

               Cow position:
               chr3:61024309-61024497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               370-566
               

               Cow position:
               chr3:67520177-67520379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               370-577
               

               Cow position:
               chr3:25060072-25059859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               370-588
               

               Cow position:
               chr3:80908297-80908070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               370-588
               

               Cow position:
               chr3:82657095-82657310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               370-589
               

               Cow position:
               chr3:3164503-3164722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               370-589
               

               Cow position:
               chr3:3985319-3985104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               370-589
               

               Cow position:
               chr3:44622894-44623125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               370-589
               

               Cow position:
               chr3:63860897-63861127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               370-590
               

               Cow position:
               chr3:2392970-2393193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               370-590
               

               Cow position:
               chr3:20802628-20802857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               370-590
               

               Cow position:
               chr3:41366988-41367211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 133
               

               Conread position:
               370-590
               

               Cow position:
               chr3:42483900-42483673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               370-590
               

               Cow position:
               chr3:44534767-44534994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               370-590
               

               Cow position:
               chr3:59271535-59271324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 51
               

               Conread position:
               370-590
               

               Cow position:
               chr3:61678697-61678464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               370-590
               

               Cow position:
               chr3:78894333-78894541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               370-590
               

               Cow position:
               chr3:79207994-79208230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               370-590
               

               Cow position:
               chr3:81401320-81401533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               371-584
               

               Cow position:
               chr3:64717016-64716800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               371-589
               

               Cow position:
               chr3:14717784-14717580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               172, 8
               

               Conread position:
               371-590
               

               Cow position:
               chr3:6873251-6873472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               371-590
               

               Cow position:
               chr3:13329782-13330000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               371-590
               

               Cow position:
               chr3:46160851-46161072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               371-590
               

               Cow position:
               chr3:57553857-57554073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               372-532
               

               Cow position:
               chr3:27108916-27109070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               372-542
               

               Cow position:
               chr3:59597182-59597006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 146
               

               Conread position:
               372-588
               

               Cow position:
               chr3:2036289-2036073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               372-588
               

               Cow position:
               chr3:14725292-14725072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               372-588
               

               Cow position:
               chr3:30418126-30417904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 169
               

               Conread position:
               372-588
               

               Cow position:
               chr3:34937837-34937615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 128
               

               Conread position:
               372-590
               

               Cow position:
               chr3:15752641-15752855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               44, 50
               

               Conread position:
               372-590
               

               Cow position:
               chr3:48578832-48578614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               6, 134
               

               Conread position:
               372-590
               

               Cow position:
               chr3:49787404-49787179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               372-590
               

               Cow position:
               chr3:59208794-59208587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               373-578
               

               Cow position:
               chr3:11063363-11063163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               166, 39
               

               Conread position:
               373-590
               

               Cow position:
               chr3:2396790-2397010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               373-590
               

               Cow position:
               chr3:5899814-5899597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               373-590
               

               Cow position:
               chr3:19789125-19789346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 49
               

               Conread position:
               373-590
               

               Cow position:
               chr3:53150314-53150100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               373-590
               

               Cow position:
               chr3:70333492-70333703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               136, 35
               

               Conread position:
               373-590
               

               Cow position:
               chr3:73590005-73590226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               41, 141
               

               Conread position:
               373-590
               

               Cow position:
               chr3:78201257-78201040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               373-590
               

               Cow position:
               chr3:81940247-81940024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               374-586
               

               Cow position:
               chr3:30701298-30701099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               41, 49
               

               Conread position:
               374-588
               

               Cow position:
               chr3:68648153-68647935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               374-590
               

               Cow position:
               chr3:55835833-55836056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               374-594
               

               Cow position:
               chr3:49731651-49731869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               375-586
               

               Cow position:
               chr3:78945843-78946060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               8, 116
               

               Conread position:
               375-587
               

               Cow position:
               chr3:47284823-47284613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               375-590
               

               Cow position:
               chr3:2903306-2903517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               69, 121
               

               Conread position:
               375-590
               

               Cow position:
               chr3:29813232-29813016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               375-590
               

               Cow position:
               chr3:31771669-31771471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               375-590
               

               Cow position:
               chr3:39171493-39171711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               376-585
               

               Cow position:
               chr3:49140053-49140259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               68, 57
               

               Conread position:
               376-590
               

               Cow position:
               chr3:17952644-17952429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               376-590
               

               Cow position:
               chr3:28692443-28692657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               68, 174
               

               Conread position:
               377-552
               

               Cow position:
               chr3:76387615-76387785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               377-567
               

               Cow position:
               chr3:59885378-59885180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               377-588
               

               Cow position:
               chr3:56301365-56301573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               377-590
               

               Cow position:
               chr3:72407-72188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               377-590
               

               Cow position:
               chr3:22900010-22900220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               377-590
               

               Cow position:
               chr3:45313035-45312826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               377-590
               

               Cow position:
               chr3:77496814-77496590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               378-582
               

               Cow position:
               chr3:55062887-55063087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               378-589
               

               Cow position:
               chr3:66866413-66866626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               379-549
               

               Cow position:
               chr3:16891295-16891112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               379-553
               

               Cow position:
               chr3:27212347-27212172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               379-584
               

               Cow position:
               chr3:54782026-54782232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               379-586
               

               Cow position:
               chr3:20663550-20663761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               379-589
               

               Cow position:
               chr3:49231001-49230784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 50
               

               Conread position:
               379-589
               

               Cow position:
               chr3:67161927-67161705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               380-590
               

               Cow position:
               chr3:4087177-4087393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               40, 162
               

               Conread position:
               380-590
               

               Cow position:
               chr3:72168735-72168948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               381-517
               

               Cow position:
               chr3:30907362-30907502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 103
               

               Conread position:
               381-590
               

               Cow position:
               chr3:8604037-8604241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 43
               

               Conread position:
               381-590
               

               Cow position:
               chr3:25691732-25691522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               383-567
               

               Cow position:
               chr3:65381129-65380949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               383-590
               

               Cow position:
               chr3:54903552-54903341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               383-594
               

               Cow position:
               chr3:2008250-2008038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               385-590
               

               Cow position:
               chr3:23945079-23944870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 126
               

               Conread position:
               386-590
               

               Cow position:
               chr3:35283113-35283325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               386-590
               

               Cow position:
               chr3:45307912-45307707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               387-588
               

               Cow position:
               chr3:49455213-49455010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               388-590
               

               Cow position:
               chr3:27286204-27285998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               389-554
               

               Cow position:
               chr3:22924437-22924599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               389-590
               

               Cow position:
               chr3:15661728-15661927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               390-590
               

               Cow position:
               chr3:58951587-58951394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               394-588
               

               Cow position:
               chr3:80922546-80922343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               394-590
               

               Cow position:
               chr3:19198647-19198454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               395-590
               

               Cow position:
               chr3:82360010-82359818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               397-590
               

               Cow position:
               chr3:42588325-42588122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               399-531
               

               Cow position:
               chr3:522667-522540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               399-590
               

               Cow position:
               chr3:13577224-13577413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               403-590
               

               Cow position:
               chr3:26894623-26894434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               406-590
               

               Cow position:
               chr3:26970787-26970598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               408-588
               

               Cow position:
               chr3:31501306-31501122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               410-586
               

               Cow position:
               chr3:60265285-60265459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               411-590
               

               Cow position:
               chr3:31419657-31419474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 138
               

               Conread position:
               413-588
               

               Cow position:
               chr3:6853552-6853726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               413-590
               

               Cow position:
               chr3:77006445-77006278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               423-590
               

               Cow position:
               chr3:4861626-4861462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               423-590
               

               Cow position:
               chr3:11020064-11019891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               423-590
               

               Cow position:
               chr3:29334571-29334741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               424-578
               

               Cow position:
               chr3:75535050-75534897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               424-590
               

               Cow position:
               chr3:22872105-22872279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               425-582
               

               Cow position:
               chr3:15158983-15158822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               432-588
               

               Cow position:
               chr3:16547610-16547451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               433-590
               

               Cow position:
               chr3:35074614-35074454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               433-590
               

               Cow position:
               chr3:66885108-66885265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               434-590
               

               Cow position:
               chr3:23277611-23277769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 101
               

               Conread position:
               436-590
               

               Cow position:
               chr3:58383896-58383741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               439-585
               

               Cow position:
               chr3:23270021-23269880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               439-590
               

               Cow position:
               chr3:61467530-61467378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               440-590
               

               Cow position:
               chr3:56704622-56704764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               443-578
               

               Cow position:
               chr3:23265375-23265510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-588
               

               Cow position:
               chr3:55971145-55971000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               443-590
               

               Cow position:
               chr3:16004071-16004213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               443-590
               

               Cow position:
               chr3:23215653-23215811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               443-590
               

               Cow position:
               chr3:51609740-51609589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               444-588
               

               Cow position:
               chr3:18855013-18854868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 101
               

               Conread position:
               446-594
               

               Cow position:
               chr3:34392181-34392328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               448-589
               

               Cow position:
               chr3:36656855-36656996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               450-589
               

               Cow position:
               chr3:51012620-51012759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               453-586
               

               Cow position:
               chr3:78067224-78067361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               457-590
               

               Cow position:
               chr3:61262708-61262576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               466-578
               

               Cow position:
               chr3:5082742-5082857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               466-590
               

               Cow position:
               chr3:65020232-65020107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               467-587
               

               Cow position:
               chr3:18607267-18607145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               471-590
               

               Cow position:
               chr3:22907940-22908061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 38
               
Show alignments to all cow chromosomes.
Conread position:	279-588
Cow position:	chr3:48530714-48530412 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	212
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	28, 23
Conread position:	282-586
Cow position:	chr3:8147590-8147888 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	208
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	151, 55
Conread position:	309-590
Cow position:	chr3:59630461-59630726 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	205
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	135, 15
Conread position:	310-522
Cow position:	chr3:9638324-9638530 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	161
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	136, 27
Conread position:	316-588
Cow position:	chr3:5374374-5374108 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	214
Alignm E-value:	0
Alignm gaps (pig, cow):	136, 11
Conread position:	317-502
Cow position:	chr3:22221372-22221180 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	146
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	38, 10
Conread position:	317-581
Cow position:	chr3:43307483-43307754 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	184
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	34, 20
Conread position:	321-586
Cow position:	chr3:45279507-45279237 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	185
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	34, 6
Conread position:	322-542
Cow position:	chr3:20677802-20678014 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	158
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	5, 0
Conread position:	322-556
Cow position:	chr3:24352900-24352668 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	162
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	30, 9
Conread position:	322-589
Cow position:	chr3:65413238-65413502 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	203
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	29, 5
Conread position:	323-589
Cow position:	chr3:57764258-57763997 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	198
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	218, 14
Conread position:	333-579
Cow position:	chr3:25477833-25477596 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	186
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	208, 12
Conread position:	337-590
Cow position:	chr3:41328466-41328228 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	190
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	110, 37
Conread position:	339-589
Cow position:	chr3:39969840-39970098 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	191
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	101, 175
Conread position:	339-590
Cow position:	chr3:83201502-83201755 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	195
Alignm E-value:	0
Alignm gaps (pig, cow):	125, 72
Conread position:	341-577
Cow position:	chr3:83845937-83845690 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	175
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	78, 180
Conread position:	341-590
Cow position:	chr3:56059832-56059580 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	171
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	75, 173
Conread position:	345-542
Cow position:	chr3:75045858-75046054 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	154
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	78, 13
Conread position:	345-579
Cow position:	chr3:76713305-76713538 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	181
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	57, 13