Non-Coding RNA Search

Cow genome map


           Conread name:
           Spl1-SPL010028D01
        

               Conread position:
               278-503
               

               Cow position:
               chr6:46997994-46998216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               310-590
               

               Cow position:
               chr6:11637639-11637912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               318-590
               

               Cow position:
               chr6:59069516-59069792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               321-587
               

               Cow position:
               chr6:49685687-49685424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               322-505
               

               Cow position:
               chr6:2623877-2623702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               122, 5
               

               Conread position:
               322-578
               

               Cow position:
               chr6:19446354-19446108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               141, 5
               

               Conread position:
               322-590
               

               Cow position:
               chr6:1703904-1703650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               221, 9
               

               Conread position:
               334-590
               

               Cow position:
               chr6:16103106-16103366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               115, 15
               

               Conread position:
               335-590
               

               Cow position:
               chr6:48425233-48425485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               115, 65
               

               Conread position:
               337-588
               

               Cow position:
               chr6:65903533-65903779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               339-585
               

               Cow position:
               chr6:14958254-14958508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 98
               

               Conread position:
               345-542
               

               Cow position:
               chr6:12845461-12845263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               346-589
               

               Cow position:
               chr6:56350254-56350008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               180, 94
               

               Conread position:
               347-537
               

               Cow position:
               chr6:62371098-62371293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               347-559
               

               Cow position:
               chr6:21061804-21062025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               347-564
               

               Cow position:
               chr6:48803554-48803779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               102, 166
               

               Conread position:
               347-570
               

               Cow position:
               chr6:44757109-44756894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               192, 21
               

               Conread position:
               347-578
               

               Cow position:
               chr6:26915410-26915178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               347-578
               

               Cow position:
               chr6:37199449-37199691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               347-578
               

               Cow position:
               chr6:56843236-56843007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               347-586
               

               Cow position:
               chr6:9750975-9751200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               347-588
               

               Cow position:
               chr6:24031458-24031213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 116
               

               Conread position:
               347-589
               

               Cow position:
               chr6:26450394-26450154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               347-590
               

               Cow position:
               chr6:15305650-15305418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               347-590
               

               Cow position:
               chr6:16707094-16706843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               61, 82
               

               Conread position:
               347-590
               

               Cow position:
               chr6:19695888-19695642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 11
               

               Conread position:
               347-590
               

               Cow position:
               chr6:38641575-38641334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               100, 11
               

               Conread position:
               347-590
               

               Cow position:
               chr6:44078596-44078357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               347-590
               

               Cow position:
               chr6:47355902-47355660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               72, 103
               

               Conread position:
               347-590
               

               Cow position:
               chr6:51581173-51581421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 163
               

               Conread position:
               348-528
               

               Cow position:
               chr6:20196221-20196395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               348-587
               

               Cow position:
               chr6:15300751-15300978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 64
               

               Conread position:
               348-588
               

               Cow position:
               chr6:5113971-5114209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               348-589
               

               Cow position:
               chr6:23532737-23532500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               348-590
               

               Cow position:
               chr6:10399828-10400059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               348-590
               

               Cow position:
               chr6:32268806-32269035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               348-594
               

               Cow position:
               chr6:30974124-30973873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               190, 69
               

               Conread position:
               349-503
               

               Cow position:
               chr6:24110358-24110209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               349-517
               

               Cow position:
               chr6:10487665-10487496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               349-528
               

               Cow position:
               chr6:1429717-1429537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               349-529
               

               Cow position:
               chr6:35103251-35103435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               349-549
               

               Cow position:
               chr6:21235120-21234921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               349-553
               

               Cow position:
               chr6:66874428-66874224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               349-555
               

               Cow position:
               chr6:32287716-32287511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               349-584
               

               Cow position:
               chr6:528207-528435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               195, 60
               

               Conread position:
               349-588
               

               Cow position:
               chr6:48187506-48187743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               152, 68
               

               Conread position:
               349-589
               

               Cow position:
               chr6:21231601-21231373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               349-590
               

               Cow position:
               chr6:1944790-1944562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               349-590
               

               Cow position:
               chr6:6060495-6060721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               183, 59
               

               Conread position:
               349-590
               

               Cow position:
               chr6:6343503-6343262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               349-590
               

               Cow position:
               chr6:8318082-8318328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               349-590
               

               Cow position:
               chr6:24962222-24961981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               349-590
               

               Cow position:
               chr6:28976963-28977193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               349-590
               

               Cow position:
               chr6:46292271-46292502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               349-590
               

               Cow position:
               chr6:67214826-67214577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               80, 225
               

               Conread position:
               350-477
               

               Cow position:
               chr6:48469076-48468952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               350-494
               

               Cow position:
               chr6:61142486-61142633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               350-501
               

               Cow position:
               chr6:37395325-37395483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 152
               

               Conread position:
               350-502
               

               Cow position:
               chr6:143299-143446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               350-503
               

               Cow position:
               chr6:5330488-5330337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               350-503
               

               Cow position:
               chr6:16287982-16288130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               350-503
               

               Cow position:
               chr6:67281970-67281819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               350-504
               

               Cow position:
               chr6:37463098-37462943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               350-520
               

               Cow position:
               chr6:17794688-17794850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               350-522
               

               Cow position:
               chr6:19292877-19292702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               350-529
               

               Cow position:
               chr6:58370834-58370650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               350-530
               

               Cow position:
               chr6:7119543-7119714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               350-531
               

               Cow position:
               chr6:36645461-36645283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               350-534
               

               Cow position:
               chr6:17548898-17549089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               66, 163
               

               Conread position:
               350-538
               

               Cow position:
               chr6:10039799-10039609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               350-538
               

               Cow position:
               chr6:46173183-46173370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 21
               

               Conread position:
               350-542
               

               Cow position:
               chr6:53841430-53841615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               350-542
               

               Cow position:
               chr6:54573335-54573127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               350-542
               

               Cow position:
               chr6:58597430-58597620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               350-544
               

               Cow position:
               chr6:44127687-44127488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               350-548
               

               Cow position:
               chr6:16266800-16266597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               98, 83
               

               Conread position:
               350-549
               

               Cow position:
               chr6:50467211-50467012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               350-552
               

               Cow position:
               chr6:23401916-23402115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               350-552
               

               Cow position:
               chr6:60667489-60667291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               155, 70
               

               Conread position:
               350-553
               

               Cow position:
               chr6:377200-377006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               350-553
               

               Cow position:
               chr6:582196-582398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               350-553
               

               Cow position:
               chr6:45064941-45065141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               350-554
               

               Cow position:
               chr6:1371150-1371359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-556
               

               Cow position:
               chr6:12829149-12829352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               350-561
               

               Cow position:
               chr6:21399680-21399892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 67
               

               Conread position:
               350-562
               

               Cow position:
               chr6:60118226-60118010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               350-567
               

               Cow position:
               chr6:4468844-4468614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               350-567
               

               Cow position:
               chr6:45596456-45596679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               350-567
               

               Cow position:
               chr6:67187760-67187544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               350-572
               

               Cow position:
               chr6:16316389-16316160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               350-573
               

               Cow position:
               chr6:57571555-57571326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 72
               

               Conread position:
               350-574
               

               Cow position:
               chr6:46282928-46283146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               76, 98
               

               Conread position:
               350-578
               

               Cow position:
               chr6:4691899-4692136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               350-578
               

               Cow position:
               chr6:24468320-24468549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               350-578
               

               Cow position:
               chr6:31635611-31635837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 153
               

               Conread position:
               350-578
               

               Cow position:
               chr6:36202897-36202676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 84
               

               Conread position:
               350-578
               

               Cow position:
               chr6:61608588-61608355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 62
               

               Conread position:
               350-581
               

               Cow position:
               chr6:7128327-7128555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               97, 152
               

               Conread position:
               350-582
               

               Cow position:
               chr6:60740090-60739859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 67
               

               Conread position:
               350-584
               

               Cow position:
               chr6:35471433-35471681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               63, 170
               

               Conread position:
               350-584
               

               Cow position:
               chr6:48567276-48567500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               151, 47
               

               Conread position:
               350-585
               

               Cow position:
               chr6:1770122-1770358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 72
               

               Conread position:
               350-585
               

               Cow position:
               chr6:3595867-3595634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 83
               

               Conread position:
               350-585
               

               Cow position:
               chr6:34251220-34251446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               350-585
               

               Cow position:
               chr6:48112272-48112045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               350-586
               

               Cow position:
               chr6:120321-120079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               350-586
               

               Cow position:
               chr6:6067626-6067837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               350-586
               

               Cow position:
               chr6:11169774-11169543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 10
               

               Conread position:
               350-586
               

               Cow position:
               chr6:16423778-16423539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               64, 162
               

               Conread position:
               350-586
               

               Cow position:
               chr6:28148332-28148091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               350-586
               

               Cow position:
               chr6:36652498-36652259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               92, 163
               

               Conread position:
               350-586
               

               Cow position:
               chr6:54365252-54365485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-587
               

               Cow position:
               chr6:46558133-46557895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               66, 210
               

               Conread position:
               350-587
               

               Cow position:
               chr6:54867593-54867349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               350-587
               

               Cow position:
               chr6:68049507-68049274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 67
               

               Conread position:
               350-588
               

               Cow position:
               chr6:2607682-2607451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               350-588
               

               Cow position:
               chr6:5095466-5095712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               350-588
               

               Cow position:
               chr6:10105903-10106158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 77
               

               Conread position:
               350-588
               

               Cow position:
               chr6:12542854-12543095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 163
               

               Conread position:
               350-588
               

               Cow position:
               chr6:35613342-35613576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               350-588
               

               Cow position:
               chr6:54430906-54430657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               350-588
               

               Cow position:
               chr6:58074124-58073883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               350-588
               

               Cow position:
               chr6:65871113-65870862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               350-588
               

               Cow position:
               chr6:67968534-67968776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 129
               

               Conread position:
               350-589
               

               Cow position:
               chr6:14914160-14914402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               350-589
               

               Cow position:
               chr6:15243331-15243088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               350-589
               

               Cow position:
               chr6:23696076-23695834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 166
               

               Conread position:
               350-589
               

               Cow position:
               chr6:24004612-24004384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               350-589
               

               Cow position:
               chr6:37783476-37783255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               152, 67
               

               Conread position:
               350-589
               

               Cow position:
               chr6:38218742-38218509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               350-589
               

               Cow position:
               chr6:48282068-48281832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               151, 67
               

               Conread position:
               350-589
               

               Cow position:
               chr6:53932770-53933011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               350-589
               

               Cow position:
               chr6:66131382-66131145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               350-590
               

               Cow position:
               chr6:445399-445147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:457254-457022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 8
               

               Conread position:
               350-590
               

               Cow position:
               chr6:4383555-4383328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               350-590
               

               Cow position:
               chr6:5302343-5302568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:6098190-6098446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 178
               

               Conread position:
               350-590
               

               Cow position:
               chr6:7190043-7190283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               350-590
               

               Cow position:
               chr6:8125402-8125168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               150, 80
               

               Conread position:
               350-590
               

               Cow position:
               chr6:8787961-8788201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               92, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:8966173-8965925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 152
               

               Conread position:
               350-590
               

               Cow position:
               chr6:9375305-9375538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               155, 27
               

               Conread position:
               350-590
               

               Cow position:
               chr6:10176226-10176467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               350-590
               

               Cow position:
               chr6:10332025-10332260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               152, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:12338069-12337820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               350-590
               

               Cow position:
               chr6:15242912-15242670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               350-590
               

               Cow position:
               chr6:15447122-15447372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 165
               

               Conread position:
               350-590
               

               Cow position:
               chr6:15937779-15938017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               350-590
               

               Cow position:
               chr6:16191754-16191502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 227
               

               Conread position:
               350-590
               

               Cow position:
               chr6:16700337-16700095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               350-590
               

               Cow position:
               chr6:16746419-16746176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:18048948-18049190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 70
               

               Conread position:
               350-590
               

               Cow position:
               chr6:19013147-19012905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               89, 177
               

               Conread position:
               350-590
               

               Cow position:
               chr6:19681449-19681688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               191, 113
               

               Conread position:
               350-590
               

               Cow position:
               chr6:21535115-21534895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               350-590
               

               Cow position:
               chr6:21542399-21542156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 84
               

               Conread position:
               350-590
               

               Cow position:
               chr6:29485158-29484926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 81
               

               Conread position:
               350-590
               

               Cow position:
               chr6:31526122-31525884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               350-590
               

               Cow position:
               chr6:32867142-32867370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               350-590
               

               Cow position:
               chr6:34196074-34196312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               350-590
               

               Cow position:
               chr6:35181181-35181417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               350-590
               

               Cow position:
               chr6:35842734-35842493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               350-590
               

               Cow position:
               chr6:37149265-37149029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr6:37467466-37467703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:38207414-38207660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 49
               

               Conread position:
               350-590
               

               Cow position:
               chr6:38441248-38441018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               350-590
               

               Cow position:
               chr6:40032266-40032028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 18
               

               Conread position:
               350-590
               

               Cow position:
               chr6:40713427-40713666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:40761201-40760970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               350-590
               

               Cow position:
               chr6:42565764-42565521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               350-590
               

               Cow position:
               chr6:44194473-44194709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               194, 66
               

               Conread position:
               350-590
               

               Cow position:
               chr6:46860091-46860332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 82
               

               Conread position:
               350-590
               

               Cow position:
               chr6:47339280-47339512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               350-590
               

               Cow position:
               chr6:47574982-47574741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               97, 72
               

               Conread position:
               350-590
               

               Cow position:
               chr6:47799369-47799134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               350-590
               

               Cow position:
               chr6:48170014-48169781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 65
               

               Conread position:
               350-590
               

               Cow position:
               chr6:51674985-51674754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               350-590
               

               Cow position:
               chr6:51835475-51835236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               350-590
               

               Cow position:
               chr6:52248056-52248299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               90, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:52412935-52412690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               350-590
               

               Cow position:
               chr6:52901314-52901077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               350-590
               

               Cow position:
               chr6:53460491-53460736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 73
               

               Conread position:
               350-590
               

               Cow position:
               chr6:53519548-53519787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               350-590
               

               Cow position:
               chr6:53652116-53651877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               350-590
               

               Cow position:
               chr6:54140873-54140649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               350-590
               

               Cow position:
               chr6:54490657-54490904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               350-590
               

               Cow position:
               chr6:60057579-60057820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               94, 70
               

               Conread position:
               350-590
               

               Cow position:
               chr6:60350216-60350463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               96, 83
               

               Conread position:
               350-590
               

               Cow position:
               chr6:60474206-60473971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               350-590
               

               Cow position:
               chr6:60859225-60859470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               350-590
               

               Cow position:
               chr6:61515112-61515362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 74
               

               Conread position:
               350-590
               

               Cow position:
               chr6:63047668-63047412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               350-590
               

               Cow position:
               chr6:63720276-63720035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 165
               

               Conread position:
               350-590
               

               Cow position:
               chr6:66434026-66433784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               58, 190
               

               Conread position:
               350-594
               

               Cow position:
               chr6:8209529-8209757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               350-594
               

               Cow position:
               chr6:12091917-12092152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               350-594
               

               Cow position:
               chr6:13040516-13040285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               350-594
               

               Cow position:
               chr6:13367361-13367127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               350-594
               

               Cow position:
               chr6:14850638-14850882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               350-594
               

               Cow position:
               chr6:21456607-21456858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 165
               

               Conread position:
               350-594
               

               Cow position:
               chr6:32121983-32121743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               350-594
               

               Cow position:
               chr6:57405049-57405293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               351-503
               

               Cow position:
               chr6:44061486-44061326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               351-527
               

               Cow position:
               chr6:3592475-3592300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               351-531
               

               Cow position:
               chr6:66531746-66531926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               351-542
               

               Cow position:
               chr6:11192390-11192582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 8
               

               Conread position:
               351-589
               

               Cow position:
               chr6:242877-242651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               148, 66
               

               Conread position:
               351-590
               

               Cow position:
               chr6:3929394-3929155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 72
               

               Conread position:
               351-590
               

               Cow position:
               chr6:47640357-47640601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 70
               

               Conread position:
               351-590
               

               Cow position:
               chr6:54990926-54991166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               352-584
               

               Cow position:
               chr6:28477243-28477024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 64
               

               Conread position:
               352-586
               

               Cow position:
               chr6:20097885-20098124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 163
               

               Conread position:
               352-586
               

               Cow position:
               chr6:54368830-54369060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               352-586
               

               Cow position:
               chr6:57546150-57546376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               205, 18
               

               Conread position:
               352-588
               

               Cow position:
               chr6:64432011-64431777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               352-589
               

               Cow position:
               chr6:59109019-59108779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               352-590
               

               Cow position:
               chr6:607337-607098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               352-590
               

               Cow position:
               chr6:611624-611397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               203, 41
               

               Conread position:
               352-590
               

               Cow position:
               chr6:21111025-21110806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               352-590
               

               Cow position:
               chr6:25008792-25008550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               61, 166
               

               Conread position:
               352-590
               

               Cow position:
               chr6:28318474-28318245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               352-590
               

               Cow position:
               chr6:31535495-31535735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 134
               

               Conread position:
               352-590
               

               Cow position:
               chr6:36196284-36196050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               352-590
               

               Cow position:
               chr6:41733698-41733463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               352-590
               

               Cow position:
               chr6:47150867-47150615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               352-590
               

               Cow position:
               chr6:62924922-62925157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               352-592
               

               Cow position:
               chr6:899219-899456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               353-514
               

               Cow position:
               chr6:6673175-6673014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 56
               

               Conread position:
               353-539
               

               Cow position:
               chr6:22850182-22850358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               353-551
               

               Cow position:
               chr6:62669938-62669745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               353-556
               

               Cow position:
               chr6:20206348-20206146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 72
               

               Conread position:
               353-556
               

               Cow position:
               chr6:67456791-67456583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               353-564
               

               Cow position:
               chr6:43134866-43135082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               353-564
               

               Cow position:
               chr6:55209631-55209418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 55
               

               Conread position:
               353-568
               

               Cow position:
               chr6:67617875-67618101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               353-569
               

               Cow position:
               chr6:4559232-4559446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               353-574
               

               Cow position:
               chr6:17313808-17313582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               353-579
               

               Cow position:
               chr6:38610041-38609815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               353-581
               

               Cow position:
               chr6:24583148-24583389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               353-581
               

               Cow position:
               chr6:67323382-67323161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               90, 68
               

               Conread position:
               353-582
               

               Cow position:
               chr6:34475488-34475710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               353-582
               

               Cow position:
               chr6:50984295-50984068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               353-586
               

               Cow position:
               chr6:27888424-27888188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               87, 71
               

               Conread position:
               353-586
               

               Cow position:
               chr6:55763926-55763694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               353-588
               

               Cow position:
               chr6:10695938-10695705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               353-588
               

               Cow position:
               chr6:18961442-18961685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               353-588
               

               Cow position:
               chr6:29240014-29239782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               353-588
               

               Cow position:
               chr6:50090715-50090479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               353-588
               

               Cow position:
               chr6:55475328-55475084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               105, 69
               

               Conread position:
               353-588
               

               Cow position:
               chr6:56376275-56376512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 161
               

               Conread position:
               353-589
               

               Cow position:
               chr6:6264725-6264480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 166
               

               Conread position:
               353-589
               

               Cow position:
               chr6:11246837-11246601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 29
               

               Conread position:
               353-589
               

               Cow position:
               chr6:55935904-55936139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               353-590
               

               Cow position:
               chr6:3952591-3952358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               353-590
               

               Cow position:
               chr6:7989342-7989580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               353-590
               

               Cow position:
               chr6:8562795-8562552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               91, 83
               

               Conread position:
               353-590
               

               Cow position:
               chr6:12669172-12668943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               353-590
               

               Cow position:
               chr6:14696301-14696536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               353-590
               

               Cow position:
               chr6:14949408-14949645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               353-590
               

               Cow position:
               chr6:17090672-17090431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               353-590
               

               Cow position:
               chr6:17997247-17997479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               96, 19
               

               Conread position:
               353-590
               

               Cow position:
               chr6:20157406-20157160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               95, 80
               

               Conread position:
               353-590
               

               Cow position:
               chr6:25407319-25407556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               353-590
               

               Cow position:
               chr6:27851632-27851869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               353-590
               

               Cow position:
               chr6:31564264-31564497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               91, 26
               

               Conread position:
               353-590
               

               Cow position:
               chr6:32126129-32125903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 59
               

               Conread position:
               353-590
               

               Cow position:
               chr6:38614892-38614660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 149
               

               Conread position:
               353-590
               

               Cow position:
               chr6:38771357-38771130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               99, 7
               

               Conread position:
               353-590
               

               Cow position:
               chr6:40774259-40774512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               57, 177
               

               Conread position:
               353-590
               

               Cow position:
               chr6:46865519-46865757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 86
               

               Conread position:
               353-590
               

               Cow position:
               chr6:47305414-47305175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               353-590
               

               Cow position:
               chr6:50445695-50445927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               353-590
               

               Cow position:
               chr6:51893427-51893669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               95, 66
               

               Conread position:
               353-590
               

               Cow position:
               chr6:59104672-59104444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               108, 64
               

               Conread position:
               353-590
               

               Cow position:
               chr6:61113840-61113586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               353-590
               

               Cow position:
               chr6:63251850-63252087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               353-590
               

               Cow position:
               chr6:63272538-63272778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               353-590
               

               Cow position:
               chr6:67951028-67950795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               91, 121
               

               Conread position:
               353-591
               

               Cow position:
               chr6:60783943-60783705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               353-594
               

               Cow position:
               chr6:22502838-22503091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               354-540
               

               Cow position:
               chr6:5413894-5413705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               354-588
               

               Cow position:
               chr6:17333981-17334219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               354-589
               

               Cow position:
               chr6:37603572-37603360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               354-590
               

               Cow position:
               chr6:6943607-6943846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 142
               

               Conread position:
               354-590
               

               Cow position:
               chr6:7539645-7539410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               354-590
               

               Cow position:
               chr6:7824838-7824597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               88, 131
               

               Conread position:
               354-590
               

               Cow position:
               chr6:24223081-24223324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               6, 71
               

               Conread position:
               354-590
               

               Cow position:
               chr6:28483087-28482851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               183, 70
               

               Conread position:
               354-590
               

               Cow position:
               chr6:36470490-36470727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 185
               

               Conread position:
               354-590
               

               Cow position:
               chr6:50747070-50746817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               74, 250
               

               Conread position:
               355-569
               

               Cow position:
               chr6:19996685-19996477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               355-586
               

               Cow position:
               chr6:65259417-65259627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               355-588
               

               Cow position:
               chr6:57164500-57164265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               355-590
               

               Cow position:
               chr6:9008541-9008775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               88, 62
               

               Conread position:
               355-590
               

               Cow position:
               chr6:35990165-35990387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               86, 67
               

               Conread position:
               355-590
               

               Cow position:
               chr6:54884834-54885077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               355-590
               

               Cow position:
               chr6:63298960-63299190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 62
               

               Conread position:
               356-580
               

               Cow position:
               chr6:9219342-9219119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               356-590
               

               Cow position:
               chr6:35993654-35993413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               356-590
               

               Cow position:
               chr6:44099157-44098920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               356-591
               

               Cow position:
               chr6:6201494-6201276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               145, 45
               

               Conread position:
               356-593
               

               Cow position:
               chr6:24934556-24934797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               107, 77
               

               Conread position:
               357-587
               

               Cow position:
               chr6:12387258-12387485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               357-590
               

               Cow position:
               chr6:24652125-24652346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 64
               

               Conread position:
               357-590
               

               Cow position:
               chr6:61631540-61631777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               357-591
               

               Cow position:
               chr6:59798720-59798503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               357-594
               

               Cow position:
               chr6:54288140-54287912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               92, 27
               

               Conread position:
               358-509
               

               Cow position:
               chr6:54364930-54365087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               358-586
               

               Cow position:
               chr6:24781487-24781724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               358-587
               

               Cow position:
               chr6:5445691-5445462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               107, 86
               

               Conread position:
               358-588
               

               Cow position:
               chr6:16626011-16625785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 123
               

               Conread position:
               358-589
               

               Cow position:
               chr6:18988280-18988053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               358-590
               

               Cow position:
               chr6:9839240-9838998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               90, 75
               

               Conread position:
               358-590
               

               Cow position:
               chr6:35436062-35435840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               358-590
               

               Cow position:
               chr6:54864588-54864831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               42, 201
               

               Conread position:
               359-540
               

               Cow position:
               chr6:38234026-38233846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               90, 57
               

               Conread position:
               359-549
               

               Cow position:
               chr6:36189765-36189574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               359-586
               

               Cow position:
               chr6:49694446-49694215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               359-590
               

               Cow position:
               chr6:34076096-34075855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               89, 58
               

               Conread position:
               359-590
               

               Cow position:
               chr6:36928728-36928487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               58, 157
               

               Conread position:
               359-590
               

               Cow position:
               chr6:47989239-47989021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               184, 60
               

               Conread position:
               359-590
               

               Cow position:
               chr6:60239328-60239556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               184, 58
               

               Conread position:
               359-590
               

               Cow position:
               chr6:65264475-65264699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               360-578
               

               Cow position:
               chr6:57299081-57298868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               142, 61
               

               Conread position:
               360-590
               

               Cow position:
               chr6:44984396-44984162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               361-590
               

               Cow position:
               chr6:60819578-60819351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               363-588
               

               Cow position:
               chr6:60442477-60442256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               150, 48
               

               Conread position:
               363-590
               

               Cow position:
               chr6:8804466-8804692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               81, 59
               

               Conread position:
               366-590
               

               Cow position:
               chr6:16738079-16737856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 51
               

               Conread position:
               367-590
               

               Cow position:
               chr6:53731583-53731357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               82, 50
               

               Conread position:
               368-561
               

               Cow position:
               chr6:21052449-21052641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               370-558
               

               Cow position:
               chr6:33150352-33150538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               370-577
               

               Cow position:
               chr6:19563721-19563924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               168, 79
               

               Conread position:
               370-586
               

               Cow position:
               chr6:58076286-58076064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               370-586
               

               Cow position:
               chr6:67304861-67304641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               370-587
               

               Cow position:
               chr6:633301-633522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               370-587
               

               Cow position:
               chr6:14838969-14839191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               370-589
               

               Cow position:
               chr6:25773329-25773544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               370-590
               

               Cow position:
               chr6:1886610-1886827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               370-590
               

               Cow position:
               chr6:5462004-5462213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               370-590
               

               Cow position:
               chr6:5957972-5958187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               172, 46
               

               Conread position:
               370-590
               

               Cow position:
               chr6:12630077-12629860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               370-590
               

               Cow position:
               chr6:13741757-13741531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               370-590
               

               Cow position:
               chr6:16411247-16411031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               370-590
               

               Cow position:
               chr6:42961301-42961531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               370-590
               

               Cow position:
               chr6:45160242-45160456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               370-590
               

               Cow position:
               chr6:46206069-46205853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 75
               

               Conread position:
               370-590
               

               Cow position:
               chr6:47540587-47540362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               370-590
               

               Cow position:
               chr6:50119726-50119951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 171
               

               Conread position:
               370-590
               

               Cow position:
               chr6:53711171-53710952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               370-590
               

               Cow position:
               chr6:61137431-61137207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               370-590
               

               Cow position:
               chr6:62479104-62479330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               370-594
               

               Cow position:
               chr6:66303784-66304015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               372-561
               

               Cow position:
               chr6:30123134-30123327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               372-571
               

               Cow position:
               chr6:19351101-19351299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               372-586
               

               Cow position:
               chr6:52430974-52431192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               372-588
               

               Cow position:
               chr6:34031715-34031506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               372-588
               

               Cow position:
               chr6:42519037-42518813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 155
               

               Conread position:
               372-588
               

               Cow position:
               chr6:60850332-60850552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               372-589
               

               Cow position:
               chr6:8637332-8637112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               372-590
               

               Cow position:
               chr6:130107-130329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               74, 45
               

               Conread position:
               372-590
               

               Cow position:
               chr6:9323203-9322995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               170, 50
               

               Conread position:
               372-590
               

               Cow position:
               chr6:37634843-37634625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               372-590
               

               Cow position:
               chr6:50577585-50577356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               43, 5
               

               Conread position:
               372-590
               

               Cow position:
               chr6:56041569-56041786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               373-590
               

               Cow position:
               chr6:5609392-5609604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               373-590
               

               Cow position:
               chr6:62325045-62324827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               374-586
               

               Cow position:
               chr6:40834416-40834633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               72, 47
               

               Conread position:
               374-589
               

               Cow position:
               chr6:52025598-52025817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               375-537
               

               Cow position:
               chr6:6470590-6470750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               376-590
               

               Cow position:
               chr6:21812787-21812566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               377-572
               

               Cow position:
               chr6:29266253-29266059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               377-587
               

               Cow position:
               chr6:60456878-60456669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               377-590
               

               Cow position:
               chr6:416155-415930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               377-590
               

               Cow position:
               chr6:3978613-3978831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               377-590
               

               Cow position:
               chr6:20230777-20230990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               377-590
               

               Cow position:
               chr6:21311709-21311922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               379-588
               

               Cow position:
               chr6:65904228-65904430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 38
               

               Conread position:
               379-590
               

               Cow position:
               chr6:642519-642741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               379-590
               

               Cow position:
               chr6:49002685-49002889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               380-589
               

               Cow position:
               chr6:53345836-53345633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               380-590
               

               Cow position:
               chr6:18968734-18968937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               380-590
               

               Cow position:
               chr6:38853613-38853822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               380-590
               

               Cow position:
               chr6:39358299-39358505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               97, 127
               

               Conread position:
               381-588
               

               Cow position:
               chr6:54294147-54293949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               383-589
               

               Cow position:
               chr6:10612897-10612703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               383-590
               

               Cow position:
               chr6:24515155-24515357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               384-590
               

               Cow position:
               chr6:53178679-53178473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               385-590
               

               Cow position:
               chr6:4864506-4864704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               385-590
               

               Cow position:
               chr6:30825990-30826200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               386-571
               

               Cow position:
               chr6:603136-602948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               387-563
               

               Cow position:
               chr6:357847-358031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 35
               

               Conread position:
               388-588
               

               Cow position:
               chr6:58363970-58364174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               388-590
               

               Cow position:
               chr6:23247924-23248127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               392-586
               

               Cow position:
               chr6:31847191-31847380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               392-590
               

               Cow position:
               chr6:12500889-12500696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               403-590
               

               Cow position:
               chr6:54647494-54647686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 160
               

               Conread position:
               407-590
               

               Cow position:
               chr6:6460565-6460375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               407-590
               

               Cow position:
               chr6:18447487-18447673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               408-590
               

               Cow position:
               chr6:33277064-33276875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 174
               

               Conread position:
               410-589
               

               Cow position:
               chr6:53453792-53453605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               414-589
               

               Cow position:
               chr6:2547258-2547077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               422-568
               

               Cow position:
               chr6:50509680-50509536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               422-589
               

               Cow position:
               chr6:32986992-32987161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               423-584
               

               Cow position:
               chr6:3718998-3719164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               423-588
               

               Cow position:
               chr6:52705715-52705879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               423-594
               

               Cow position:
               chr6:20605938-20605765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 76
               

               Conread position:
               424-588
               

               Cow position:
               chr6:15922994-15923161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               424-590
               

               Cow position:
               chr6:24327136-24327302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               426-590
               

               Cow position:
               chr6:61575612-61575439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               428-590
               

               Cow position:
               chr6:33302412-33302248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               428-590
               

               Cow position:
               chr6:39994460-39994625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               431-590
               

               Cow position:
               chr6:12623462-12623304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 13
               

               Conread position:
               432-590
               

               Cow position:
               chr6:53138924-53139093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               434-588
               

               Cow position:
               chr6:21587422-21587583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               443-585
               

               Cow position:
               chr6:389152-389011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               443-587
               

               Cow position:
               chr6:64449374-64449228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               443-589
               

               Cow position:
               chr6:1783795-1783936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 81
               

               Conread position:
               443-589
               

               Cow position:
               chr6:32210646-32210790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               443-590
               

               Cow position:
               chr6:7694366-7694518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 143
               

               Conread position:
               444-590
               

               Cow position:
               chr6:2013000-2012855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               445-590
               

               Cow position:
               chr6:59620649-59620505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               454-590
               

               Cow position:
               chr6:2896727-2896587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               458-590
               

               Cow position:
               chr6:59015591-59015725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               462-590
               

               Cow position:
               chr6:51463650-51463780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               464-590
               

               Cow position:
               chr6:51398762-51398637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               465-590
               

               Cow position:
               chr6:88944-89072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               466-590
               

               Cow position:
               chr6:59301861-59301989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               467-577
               

               Cow position:
               chr6:57088741-57088846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               468-594
               

               Cow position:
               chr6:20329982-20329853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 41
               

               Conread position:
               469-590
               

               Cow position:
               chr6:1002277-1002397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               470-590
               

               Cow position:
               chr6:17067863-17067984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.
Conread position:	278-503
Cow position:	chr6:46997994-46998216 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	167
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	36, 24
Conread position:	310-590
Cow position:	chr6:11637639-11637912 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	190
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	45, 27
Conread position:	318-590
Cow position:	chr6:59069516-59069792 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	212
Alignm E-value:	0
Alignm gaps (pig, cow):	33, 13
Conread position:	321-587
Cow position:	chr6:49685687-49685424 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	203
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	7, 20
Conread position:	322-505
Cow position:	chr6:2623877-2623702 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	145
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	122, 5
Conread position:	322-578
Cow position:	chr6:19446354-19446108 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	187
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	141, 5
Conread position:	322-590
Cow position:	chr6:1703904-1703650 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	196
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	221, 9
Conread position:	334-590
Cow position:	chr6:16103106-16103366 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	190
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	115, 15
Conread position:	335-590
Cow position:	chr6:48425233-48425485 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	181
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	115, 65
Conread position:	337-588
Cow position:	chr6:65903533-65903779 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	182
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	19, 82
Conread position:	339-585
Cow position:	chr6:14958254-14958508 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	188
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	59, 98
Conread position:	345-542
Cow position:	chr6:12845461-12845263 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	156
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	94, 67
Conread position:	346-589
Cow position:	chr6:56350254-56350008 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	161
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	180, 94
Conread position:	347-537
Cow position:	chr6:62371098-62371293 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	146
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	101, 62
Conread position:	347-559
Cow position:	chr6:21061804-21062025 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	162
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	66, 26
Conread position:	347-564
Cow position:	chr6:48803554-48803779 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	170
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	102, 166
Conread position:	347-570
Cow position:	chr6:44757109-44756894 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	165
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	192, 21
Conread position:	347-578
Cow position:	chr6:26915410-26915178 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	163
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	93, 73
Conread position:	347-586
Cow position:	chr6:9750975-9751200 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	181
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	62, 0
Conread position:	347-588
Cow position:	chr6:24031458-24031213 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	172
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	70, 116