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Cow genome map

           
Conread name:
           
Spl1-SPL010035C03
        

               
Conread position:
               
1-378
               

               
Cow position:
               
chr20:12334575-12334187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr20:41120088-41119743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
61-379
               

               
Cow position:
               
chr20:14735796-14735482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
88-379
               

               
Cow position:
               
chr20:12441593-12441886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
89-354
               

               
Cow position:
               
chr20:28832072-28831794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 181
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr20:5385646-5385856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
91-372
               

               
Cow position:
               
chr20:18392170-18392433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
96-357
               

               
Cow position:
               
chr20:37165805-37165554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr20:21714843-21714581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
100-376
               

               
Cow position:
               
chr20:40257062-40256779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
101-379
               

               
Cow position:
               
chr20:28296385-28296095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
102-333
               

               
Cow position:
               
chr20:30710556-30710798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr20:15312758-15312496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 171
               

               
Conread position:
               
102-357
               

               
Cow position:
               
chr20:31261816-31261560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
102-379
               

               
Cow position:
               
chr20:33435080-33435364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
104-255
               

               
Cow position:
               
chr20:36741560-36741401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
104-376
               

               
Cow position:
               
chr20:4621257-4621530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
106-357
               

               
Cow position:
               
chr20:9433669-9433426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
106-376
               

               
Cow position:
               
chr20:38414905-38415162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
107-340
               

               
Cow position:
               
chr20:5636559-5636325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr20:24868950-24869238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
110-334
               

               
Cow position:
               
chr20:18500285-18500070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
110-354
               

               
Cow position:
               
chr20:41627269-41627515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
110-379
               

               
Cow position:
               
chr20:17846041-17845765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
11, 150
               

               
Conread position:
               
111-356
               

               
Cow position:
               
chr20:19146954-19146699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr20:11045756-11045506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr20:35741845-35741581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
44, 173
               

               
Conread position:
               
111-376
               

               
Cow position:
               
chr20:35009660-35009932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
111-379
               

               
Cow position:
               
chr20:33144476-33144750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
112-260
               

               
Cow position:
               
chr20:30119495-30119653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr20:11188725-11188920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
112-304
               

               
Cow position:
               
chr20:24834172-24833975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr20:22484939-22484724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
19, 156
               

               
Conread position:
               
112-335
               

               
Cow position:
               
chr20:42197389-42197177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
112-356
               

               
Cow position:
               
chr20:30817616-30817366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr20:6424047-6423792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 221
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr20:12155046-12155274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr20:21019643-21019393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr20:34108181-34107944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr20:38578684-38578947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr20:6890790-6890514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
112-377
               

               
Cow position:
               
chr20:28067343-28067619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
112-378
               

               
Cow position:
               
chr20:11482058-11482333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr20:22065146-22064875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr20:39417823-39418089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr20:35365122-35364853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
113-352
               

               
Cow position:
               
chr20:14100356-14100605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr20:14679698-14679427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
115-340
               

               
Cow position:
               
chr20:15568876-15569105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
115-388
               

               
Cow position:
               
chr20:27407805-27408084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
116-288
               

               
Cow position:
               
chr20:24711912-24711732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
116-299
               

               
Cow position:
               
chr20:12430724-12430908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
116-303
               

               
Cow position:
               
chr20:36633889-36633699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
116-327
               

               
Cow position:
               
chr20:9267032-9267243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr20:39247985-39247763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr20:5024879-5025095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr20:13025542-13025761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr20:24727435-24727220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr20:11923174-11923407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr20:39728522-39728277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr20:13876630-13876880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr20:26077154-26076912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr20:38768388-38768625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
116-370
               

               
Cow position:
               
chr20:42309897-42310144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr20:15073763-15074023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr20:15147943-15148204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr20:32577845-32578110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
116-377
               

               
Cow position:
               
chr20:12995933-12996200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
116-378
               

               
Cow position:
               
chr20:3599323-3599583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr20:31464305-31464576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
117-234
               

               
Cow position:
               
chr20:10772277-10772150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
117-244
               

               
Cow position:
               
chr20:20056414-20056548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
117-250
               

               
Cow position:
               
chr20:11359561-11359693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
117-255
               

               
Cow position:
               
chr20:23541086-23541232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
117-256
               

               
Cow position:
               
chr20:11135690-11135832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
117-260
               

               
Cow position:
               
chr20:11008241-11008089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-260
               

               
Cow position:
               
chr20:16492144-16491992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
117-275
               

               
Cow position:
               
chr20:21428233-21428071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
117-280
               

               
Cow position:
               
chr20:15822621-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr20:34901643-34901467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
117-292
               

               
Cow position:
               
chr20:23103294-23103114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
117-292
               

               
Cow position:
               
chr20:28249251-28249076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
117-298
               

               
Cow position:
               
chr20:33067289-33067486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
117-300
               

               
Cow position:
               
chr20:24000726-24000915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr20:28594357-28594162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr20:27003653-27003852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr20:31289581-31289374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
117-312
               

               
Cow position:
               
chr20:28955630-28955830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
117-314
               

               
Cow position:
               
chr20:36040545-36040343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr20:40446400-40446191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
117-329
               

               
Cow position:
               
chr20:14917356-14917156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
117-332
               

               
Cow position:
               
chr20:4334459-4334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
117-332
               

               
Cow position:
               
chr20:5078269-5078037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-340
               

               
Cow position:
               
chr20:7659142-7659370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
117-346
               

               
Cow position:
               
chr20:32523535-32523307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
117-349
               

               
Cow position:
               
chr20:13652296-13652521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
117-349
               

               
Cow position:
               
chr20:31323859-31323634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
117-352
               

               
Cow position:
               
chr20:34001318-34001563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 181
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr20:29805587-29805832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr20:35958719-35958475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:3141645-3141411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:7550309-7550069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:11453287-11453527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:12420547-12420793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:13752294-13752068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:13967185-13967430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:14980438-14980687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:17251788-17251536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:19751378-19751137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:20739216-20739461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:21345504-21345234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:22313089-22313329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:33532374-33532139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:40423033-40423262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:40511685-40511930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr20:40782032-40781796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
117-359
               

               
Cow position:
               
chr20:22959276-22959516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 143
               

               
Conread position:
               
117-360
               

               
Cow position:
               
chr20:19237146-19236903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
117-372
               

               
Cow position:
               
chr20:39415821-39415554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
117-374
               

               
Cow position:
               
chr20:10200417-10200156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr20:22704366-22704098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:6096424-6096676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:6240449-6240720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:7182604-7182867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:7442061-7442314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:10348822-10348559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:14879860-14879596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:16715463-16715209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:21928976-21928714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:29845122-29844864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:34251602-34251869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:35146092-35145818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr20:41704233-41703963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr20:14572292-14572548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:5950572-5950827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:6054438-6054707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 157
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:6603112-6602842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:7110050-7110311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:9537210-9536939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:11176176-11176442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:13023425-13023673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:19328459-19328205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr20:23870748-23871010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
117-380
               

               
Cow position:
               
chr20:20967392-20967144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
117-383
               

               
Cow position:
               
chr20:34918342-34918080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
117-459
               

               
Cow position:
               
chr20:41451739-41452082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
118-253
               

               
Cow position:
               
chr20:16548208-16548350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
118-256
               

               
Cow position:
               
chr20:11548652-11548798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
118-276
               

               
Cow position:
               
chr20:37357678-37357506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
118-293
               

               
Cow position:
               
chr20:19616562-19616378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
118-318
               

               
Cow position:
               
chr20:38847167-38847367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
118-327
               

               
Cow position:
               
chr20:14433351-14433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
118-333
               

               
Cow position:
               
chr20:36010866-36010641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
118-339
               

               
Cow position:
               
chr20:21761845-21761622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
118-349
               

               
Cow position:
               
chr20:41403647-41403405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
118-352
               

               
Cow position:
               
chr20:5814637-5814401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:3739934-3740172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:6501864-6501627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:7132420-7132176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:7426127-7426361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:11864063-11864308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:12581884-12582119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:13269691-13269451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:14806957-14806714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:16935241-16935475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:17904229-17903988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:19312995-19313237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:20984062-20983835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:21372378-21372144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:23505898-23505656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:23846595-23846844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:24398576-24398804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:39325461-39325213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr20:40127273-40127508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
118-373
               

               
Cow position:
               
chr20:18100478-18100226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
118-374
               

               
Cow position:
               
chr20:9412558-9412303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
118-374
               

               
Cow position:
               
chr20:26996600-26996341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr20:7756552-7756820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr20:8578319-8578053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr20:11542218-11542474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr20:22235377-22235124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr20:31927392-31927649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr20:24069876-24069618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
118-378
               

               
Cow position:
               
chr20:18320721-18320990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:3331215-3331489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:5104380-5104629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:7806499-7806757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:9014276-9014543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:11340735-11341000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:18551433-18551168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:20352842-20353109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:28605280-28605011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:33363588-33363325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:38486488-38486743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr20:39019766-39019501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
119-250
               

               
Cow position:
               
chr20:23506401-23506539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
119-301
               

               
Cow position:
               
chr20:13795052-13794873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr20:34597028-34597233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 143
               

               
Conread position:
               
119-330
               

               
Cow position:
               
chr20:14540413-14540207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
119-338
               

               
Cow position:
               
chr20:1576163-1575946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
119-340
               

               
Cow position:
               
chr20:34221548-34221319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
119-348
               

               
Cow position:
               
chr20:271354-271586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr20:42469830-42469598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
119-355
               

               
Cow position:
               
chr20:14759596-14759834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr20:35906987-35907218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr20:23064761-23065001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr20:30778238-30778004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr20:36779660-36779903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
119-358
               

               
Cow position:
               
chr20:34365095-34364862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
119-373
               

               
Cow position:
               
chr20:8429816-8429553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr20:31799134-31799387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr20:1139698-1139964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr20:4206041-4205772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr20:4945182-4945436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr20:34202704-34202456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr20:34777249-34776995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr20:580851-581114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr20:10208878-10208610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr20:21016553-21016284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr20:4755765-4756020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr20:10884289-10884561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr20:22007559-22007309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr20:35797681-35797411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
119-384
               

               
Cow position:
               
chr20:34097885-34098158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr20:5078695-5078532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
120-313
               

               
Cow position:
               
chr20:20099533-20099722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
120-355
               

               
Cow position:
               
chr20:10913275-10913505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr20:41028558-41028311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr20:18185635-18185389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr20:10818172-10818419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr20:15760881-15761143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
121-256
               

               
Cow position:
               
chr20:12064988-12064850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
121-257
               

               
Cow position:
               
chr20:35192839-35192701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
121-355
               

               
Cow position:
               
chr20:15235828-15235595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
121-358
               

               
Cow position:
               
chr20:15565760-15566004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
121-375
               

               
Cow position:
               
chr20:11741238-11741494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
121-376
               

               
Cow position:
               
chr20:9473545-9473805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
121-376
               

               
Cow position:
               
chr20:15593365-15593105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
121-377
               

               
Cow position:
               
chr20:10178027-10178302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr20:40450076-40449859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr20:22445581-22445807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr20:38818073-38817838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
122-377
               

               
Cow position:
               
chr20:23792670-23792410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr20:6257995-6258258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr20:35176711-35176964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
123-376
               

               
Cow position:
               
chr20:24521814-24521560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
124-354
               

               
Cow position:
               
chr20:31069703-31069466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
124-355
               

               
Cow position:
               
chr20:3321068-3321308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
124-357
               

               
Cow position:
               
chr20:20202058-20201820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 198
               

               
Conread position:
               
124-375
               

               
Cow position:
               
chr20:20203282-20203026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr20:3606896-3607145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr20:8556205-8556465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 142
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr20:9923646-9923406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr20:38872943-38873183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
125-357
               

               
Cow position:
               
chr20:40185608-40185848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
125-376
               

               
Cow position:
               
chr20:20312684-20312928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 132
               

               
Conread position:
               
127-354
               

               
Cow position:
               
chr20:35999751-35999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
127-379
               

               
Cow position:
               
chr20:25686287-25686546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
128-357
               

               
Cow position:
               
chr20:23834188-23833954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr20:32068792-32069018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr20:34240597-34240353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr20:37272774-37272544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
129-376
               

               
Cow position:
               
chr20:9379465-9379218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
129-379
               

               
Cow position:
               
chr20:24002375-24002131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
130-373
               

               
Cow position:
               
chr20:17733720-17733966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
130-390
               

               
Cow position:
               
chr20:31077611-31077343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr20:14756009-14756240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
132-357
               

               
Cow position:
               
chr20:23936348-23936590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
132-376
               

               
Cow position:
               
chr20:32636516-32636756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr20:3035162-3034899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
133-357
               

               
Cow position:
               
chr20:24392034-24391808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
134-289
               

               
Cow position:
               
chr20:41973695-41973858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
134-357
               

               
Cow position:
               
chr20:26469008-26469237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
138-357
               

               
Cow position:
               
chr20:6848681-6848449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr20:27314719-27314489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
141-357
               

               
Cow position:
               
chr20:36207855-36207630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
143-345
               

               
Cow position:
               
chr20:9701523-9701735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 121
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr20:3781380-3781598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
145-379
               

               
Cow position:
               
chr20:27340106-27339872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr20:9988623-9988373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
147-256
               

               
Cow position:
               
chr20:11498552-11498436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
152-374
               

               
Cow position:
               
chr20:37200397-37200164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
152-379
               

               
Cow position:
               
chr20:8910955-8910729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
153-367
               

               
Cow position:
               
chr20:34920014-34920229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
154-357
               

               
Cow position:
               
chr20:26680157-26679950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
156-379
               

               
Cow position:
               
chr20:19410330-19410564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
157-376
               

               
Cow position:
               
chr20:21325142-21324936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
160-357
               

               
Cow position:
               
chr20:8020926-8020722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
160-382
               

               
Cow position:
               
chr20:13994837-13994612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr20:32084056-32084287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
162-379
               

               
Cow position:
               
chr20:18399784-18399566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
165-344
               

               
Cow position:
               
chr20:18837137-18837320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
165-376
               

               
Cow position:
               
chr20:5998653-5998855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
165-376
               

               
Cow position:
               
chr20:33177208-33176991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr20:25293611-25293422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
166-376
               

               
Cow position:
               
chr20:35897537-35897327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
166-390
               

               
Cow position:
               
chr20:5269053-5269275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
169-357
               

               
Cow position:
               
chr20:2204654-2204837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
169-357
               

               
Cow position:
               
chr20:41374689-41374512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
171-376
               

               
Cow position:
               
chr20:23679135-23679337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 6
               

               
Conread position:
               
171-376
               

               
Cow position:
               
chr20:33169861-33170067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
172-340
               

               
Cow position:
               
chr20:20242101-20241945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
172-375
               

               
Cow position:
               
chr20:18618646-18618448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr20:5826952-5826746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
177-304
               

               
Cow position:
               
chr20:361311-361440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
177-340
               

               
Cow position:
               
chr20:32988832-32988987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
177-346
               

               
Cow position:
               
chr20:12048401-12048235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
179-357
               

               
Cow position:
               
chr20:3569061-3569232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
179-376
               

               
Cow position:
               
chr20:14831609-14831803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
185-376
               

               
Cow position:
               
chr20:35760669-35760480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
187-356
               

               
Cow position:
               
chr20:5025307-5025473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
197-354
               

               
Cow position:
               
chr20:20934773-20934932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
197-357
               

               
Cow position:
               
chr20:41977398-41977249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
201-334
               

               
Cow position:
               
chr20:9730066-9729936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
206-392
               

               
Cow position:
               
chr20:11043528-11043705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
163, 51
               

               
Conread position:
               
208-356
               

               
Cow position:
               
chr20:11550338-11550195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
213-357
               

               
Cow position:
               
chr20:4781533-4781390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
213-376
               

               
Cow position:
               
chr20:16941345-16941514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
214-353
               

               
Cow position:
               
chr20:5116335-5116473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
214-376
               

               
Cow position:
               
chr20:4892931-4893088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
219-376
               

               
Cow position:
               
chr20:5702710-5702554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
219-376
               

               
Cow position:
               
chr20:16291435-16291281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
219-383
               

               
Cow position:
               
chr20:3658728-3658896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
220-379
               

               
Cow position:
               
chr20:13501895-13501740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
230-376
               

               
Cow position:
               
chr20:23850234-23850093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
232-376
               

               
Cow position:
               
chr20:12784148-12784006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
232-379
               

               
Cow position:
               
chr20:14620317-14620467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
234-376
               

               
Cow position:
               
chr20:12840007-12839864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
250-377
               

               
Cow position:
               
chr20:14718806-14718933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
253-375
               

               
Cow position:
               
chr20:20899163-20899045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
257-376
               

               
Cow position:
               
chr20:32847284-32847162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
257-377
               

               
Cow position:
               
chr20:7710282-7710401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
467-793
               

               
Cow position:
               
chr20:23707174-23707489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
481-724
               

               
Cow position:
               
chr20:23522575-23522330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 77
               

               
Conread position:
               
533-814
               

               
Cow position:
               
chr20:23529172-23528881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
557-790
               

               
Cow position:
               
chr20:10137552-10137317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 10
               
Show alignments to all cow chromosomes.