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Cow genome map

           
Conread name:
           
Spl1-SPL010035C03
        

               
Conread position:
               
2-253
               

               
Cow position:
               
chr22:14835090-14835338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
11-376
               

               
Cow position:
               
chr22:25629627-25630008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 45
               

               
Conread position:
               
11-377
               

               
Cow position:
               
chr22:30689752-30689391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
16-340
               

               
Cow position:
               
chr22:11458962-11458623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
55-357
               

               
Cow position:
               
chr22:19787590-19787898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
100, 161
               

               
Conread position:
               
91-376
               

               
Cow position:
               
chr22:15398525-15398815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
91-377
               

               
Cow position:
               
chr22:36569498-36569782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
92-347
               

               
Cow position:
               
chr22:3908981-3908710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
94-377
               

               
Cow position:
               
chr22:8063282-8063565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr22:16823148-16822921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
98-298
               

               
Cow position:
               
chr22:15668425-15668633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
99-333
               

               
Cow position:
               
chr22:27835576-27835344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
99-376
               

               
Cow position:
               
chr22:25715051-25714773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
99-377
               

               
Cow position:
               
chr22:22146276-22145988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
99-379
               

               
Cow position:
               
chr22:6122859-6123136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr22:10585661-10585919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr22:45513478-45513739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
101-304
               

               
Cow position:
               
chr22:26969824-26969617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
101-311
               

               
Cow position:
               
chr22:8090487-8090701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr22:32698805-32698586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
101-340
               

               
Cow position:
               
chr22:8397783-8398016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
101-340
               

               
Cow position:
               
chr22:27047368-27047601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr22:26941835-26941581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
101-357
               

               
Cow position:
               
chr22:26490513-26490243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 169
               

               
Conread position:
               
101-376
               

               
Cow position:
               
chr22:11257702-11257973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
102-374
               

               
Cow position:
               
chr22:22022930-22022651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
102-375
               

               
Cow position:
               
chr22:19738529-19738814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 156
               

               
Conread position:
               
104-376
               

               
Cow position:
               
chr22:41044871-41045151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 219
               

               
Conread position:
               
104-379
               

               
Cow position:
               
chr22:21890314-21890600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 179
               

               
Conread position:
               
105-357
               

               
Cow position:
               
chr22:24175851-24176092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
106-302
               

               
Cow position:
               
chr22:3241663-3241859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
106-343
               

               
Cow position:
               
chr22:15618640-15618411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
106-355
               

               
Cow position:
               
chr22:17294900-17295147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 146
               

               
Conread position:
               
106-357
               

               
Cow position:
               
chr22:16621212-16620955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 193
               

               
Conread position:
               
106-357
               

               
Cow position:
               
chr22:38980931-38980686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
106-374
               

               
Cow position:
               
chr22:41245284-41245008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
106-376
               

               
Cow position:
               
chr22:2627609-2627340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
106-376
               

               
Cow position:
               
chr22:14372214-14371930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
106-379
               

               
Cow position:
               
chr22:26184125-26184401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
107-357
               

               
Cow position:
               
chr22:39293708-39293965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
107-376
               

               
Cow position:
               
chr22:14816394-14816662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
108-357
               

               
Cow position:
               
chr22:40349379-40349132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
108-376
               

               
Cow position:
               
chr22:23855007-23854744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
109-357
               

               
Cow position:
               
chr22:13849416-13849668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
110-238
               

               
Cow position:
               
chr22:13878213-13878085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
110-333
               

               
Cow position:
               
chr22:23121973-23122220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
110-352
               

               
Cow position:
               
chr22:8883047-8882811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
110-367
               

               
Cow position:
               
chr22:1309698-1309956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
111-250
               

               
Cow position:
               
chr22:12892335-12892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
111-344
               

               
Cow position:
               
chr22:8429918-8429677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
111-352
               

               
Cow position:
               
chr22:44180624-44180380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
111-354
               

               
Cow position:
               
chr22:2643141-2642902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr22:2095584-2095331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr22:31870222-31870468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
111-367
               

               
Cow position:
               
chr22:766258-766507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
112-356
               

               
Cow position:
               
chr22:10339085-10339330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr22:59647-59388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr22:4535295-4535545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr22:7967739-7967479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr22:12573241-12572985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr22:19775402-19775644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 146
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr22:36539633-36539891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr22:7153915-7153653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 180
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr22:31592822-31593098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr22:40387182-40386935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
112-377
               

               
Cow position:
               
chr22:25221865-25222141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
112-377
               

               
Cow position:
               
chr22:28058020-28058281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:2010836-2010558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:8116058-8116323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:13841169-13840897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:25477080-25476823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:32895249-32894963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:38930473-38930755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr22:39494167-39494445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
113-252
               

               
Cow position:
               
chr22:13222145-13221993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
113-357
               

               
Cow position:
               
chr22:43291868-43292119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 152
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr22:16251540-16251802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
113-379
               

               
Cow position:
               
chr22:3325616-3325340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 155
               

               
Conread position:
               
116-310
               

               
Cow position:
               
chr22:24628630-24628821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
116-333
               

               
Cow position:
               
chr22:21530334-21530545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr22:24734286-24734527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr22:6622221-6622463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr22:30190974-30190743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr22:6149366-6149604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr22:14143088-14143324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr22:23861130-23861365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr22:32651530-32651289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 205
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr22:36560632-36560879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
116-373
               

               
Cow position:
               
chr22:21568023-21567764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 143
               

               
Conread position:
               
116-374
               

               
Cow position:
               
chr22:4651203-4650946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr22:1609743-1609993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr22:7851990-7851722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr22:14924706-14924961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
116-377
               

               
Cow position:
               
chr22:19047789-19048043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr22:13866690-13866405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
117-227
               

               
Cow position:
               
chr22:28704209-28704095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
117-249
               

               
Cow position:
               
chr22:6852559-6852698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
117-254
               

               
Cow position:
               
chr22:1911690-1911550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
117-255
               

               
Cow position:
               
chr22:12929255-12929395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
117-255
               

               
Cow position:
               
chr22:44410746-44410605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
117-261
               

               
Cow position:
               
chr22:5837295-5837141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-292
               

               
Cow position:
               
chr22:45846168-45845993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
117-302
               

               
Cow position:
               
chr22:22553215-22553397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
117-313
               

               
Cow position:
               
chr22:32480455-32480653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr22:21205351-21205161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
117-329
               

               
Cow position:
               
chr22:4583586-4583365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr22:1849099-1848870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr22:15025085-15025298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr22:10421057-10420833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr22:11601060-11600836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
117-338
               

               
Cow position:
               
chr22:27322339-27322126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
117-339
               

               
Cow position:
               
chr22:877540-877311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
36, 143
               

               
Conread position:
               
117-340
               

               
Cow position:
               
chr22:14378667-14378885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
192, 38
               

               
Conread position:
               
117-344
               

               
Cow position:
               
chr22:11819678-11819913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
117-344
               

               
Cow position:
               
chr22:24732521-24732752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
117-344
               

               
Cow position:
               
chr22:41853930-41853691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
117-347
               

               
Cow position:
               
chr22:17125610-17125374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 173
               

               
Conread position:
               
117-353
               

               
Cow position:
               
chr22:13688073-13688326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr22:1975639-1975397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr22:1265899-1266155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr22:23806516-23806762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 174
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:534524-534275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:3301314-3301542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:3950278-3950023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:3960258-3960511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:3987541-3987294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:7164987-7164736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 231
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:8412553-8412306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:8418486-8418250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:11130895-11130653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:12968044-12968288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:14690946-14691194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:14844593-14844352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:23176416-23176668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:24611067-24611294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:29642139-29641892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr22:37029579-37029821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
117-358
               

               
Cow position:
               
chr22:22860886-22861131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
117-370
               

               
Cow position:
               
chr22:5016522-5016277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
117-374
               

               
Cow position:
               
chr22:6494186-6493935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
117-374
               

               
Cow position:
               
chr22:30515282-30515017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 153
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr22:19341226-19340963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr22:34726693-34726435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:6960870-6960631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:8733313-8733560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:10303041-10302773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:10919827-10920101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:12946149-12946402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:15338140-15337877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:15490679-15490422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:16533099-16532843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:17814258-17813991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:17993006-17993267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:23857071-23856811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:28370971-28370709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:28665308-28665032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:30483940-30483675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:32188829-32189076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:33901059-33901313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:34475975-34476238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:34750700-34750440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr22:40120851-40121115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr22:6610325-6610592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr22:21012410-21012150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr22:10609383-10609088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr22:18926381-18926112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr22:294908-295178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr22:22155630-22155360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr22:25205946-25206210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr22:30269437-30269174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr22:37324569-37324306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
117-381
               

               
Cow position:
               
chr22:5384680-5384412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
117-388
               

               
Cow position:
               
chr22:22223212-22222943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
118-283
               

               
Cow position:
               
chr22:21325709-21325878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
118-325
               

               
Cow position:
               
chr22:41270977-41271186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
118-327
               

               
Cow position:
               
chr22:36432946-36433158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
118-328
               

               
Cow position:
               
chr22:590363-590146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
118-340
               

               
Cow position:
               
chr22:23689180-23689408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr22:17259143-17259354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
118-353
               

               
Cow position:
               
chr22:21355117-21355359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
118-354
               

               
Cow position:
               
chr22:22160750-22160505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr22:13957620-13957867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:2913303-2913060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:4017501-4017257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:4043957-4043715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 137
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:4108706-4108957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:5616326-5616081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:13300435-13300191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:15068451-15068207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:15090766-15090522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:16273664-16273412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:16327521-16327287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:29290115-29290355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr22:43119705-43119947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
118-358
               

               
Cow position:
               
chr22:43398026-43397798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr22:32326823-32326569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
118-372
               

               
Cow position:
               
chr22:27825864-27825603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
118-374
               

               
Cow position:
               
chr22:8324263-8324009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
118-374
               

               
Cow position:
               
chr22:11613448-11613189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:4060923-4061180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:4075863-4076136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:14091199-14091469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:22613130-22612875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:28071583-28071317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 183
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:28146700-28146447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr22:30699205-30698942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr22:34712750-34712476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 219
               

               
Conread position:
               
118-378
               

               
Cow position:
               
chr22:1484887-1484622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:2470216-2470488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:11813699-11813958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:15919616-15919876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:15959743-15960012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 142
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:16812140-16812404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:17764406-17764134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:23865494-23865221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:26134200-26134476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:31196476-31196737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr22:38313453-38313705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
118-383
               

               
Cow position:
               
chr22:12681776-12682037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
119-276
               

               
Cow position:
               
chr22:27681740-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 141
               

               
Conread position:
               
119-282
               

               
Cow position:
               
chr22:40789589-40789426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
119-294
               

               
Cow position:
               
chr22:31153976-31153801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
119-313
               

               
Cow position:
               
chr22:27740913-27740718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
119-331
               

               
Cow position:
               
chr22:11071565-11071357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
119-336
               

               
Cow position:
               
chr22:22908214-22907996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
119-338
               

               
Cow position:
               
chr22:2523985-2523763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
119-340
               

               
Cow position:
               
chr22:27274677-27274894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
179, 25
               

               
Conread position:
               
119-343
               

               
Cow position:
               
chr22:1279362-1279593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr22:46567868-46568094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
119-347
               

               
Cow position:
               
chr22:30471670-30471896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
119-348
               

               
Cow position:
               
chr22:12313448-12313210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr22:4990144-4990386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr22:13670147-13670384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr22:27577766-27577519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
119-354
               

               
Cow position:
               
chr22:13187906-13187665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
119-354
               

               
Cow position:
               
chr22:27550380-27550140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr22:10983373-10983127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr22:27328871-27329101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr22:33414998-33415239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr22:33448058-33448292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr22:5290873-5290625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr22:18196534-18196292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr22:30049543-30049791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr22:30955050-30954821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr22:37201872-37201639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr22:46610757-46610999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
119-358
               

               
Cow position:
               
chr22:28351633-28351875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
119-373
               

               
Cow position:
               
chr22:9372544-9372281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr22:3965209-3964950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr22:9521166-9520911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr22:10161990-10161726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
119-375
               

               
Cow position:
               
chr22:41829217-41829468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr22:6202940-6202676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr22:7838614-7838368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr22:14376389-14376630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr22:25943498-25943244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr22:34398433-34398692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr22:42684932-42684663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
36, 177
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr22:8840628-8840347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr22:34894990-34894732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
119-378
               

               
Cow position:
               
chr22:20626860-20626602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
119-378
               

               
Cow position:
               
chr22:21295701-21295965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr22:1326442-1326178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr22:25246934-25246669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr22:26339777-26339518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr22:26786377-26786112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr22:32661533-32661271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr22:40374632-40374365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
119-383
               

               
Cow position:
               
chr22:30964151-30963886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
119-392
               

               
Cow position:
               
chr22:23403623-23403896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr22:12315833-12315617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
120-356
               

               
Cow position:
               
chr22:1640278-1640526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr22:644746-644979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr22:2502848-2502619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr22:13735252-13735483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr22:16044394-16044648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr22:18126711-18126953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
120-358
               

               
Cow position:
               
chr22:25912943-25912706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
120-376
               

               
Cow position:
               
chr22:26659073-26658818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr22:14178805-14179072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr22:23804954-23805225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
121-291
               

               
Cow position:
               
chr22:10292988-10292810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
121-318
               

               
Cow position:
               
chr22:12389120-12388913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 169
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr22:10632937-10632698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
121-357
               

               
Cow position:
               
chr22:26316490-26316255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
121-374
               

               
Cow position:
               
chr22:6754246-6754489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
121-376
               

               
Cow position:
               
chr22:5282527-5282270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
121-377
               

               
Cow position:
               
chr22:853042-852789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
121-377
               

               
Cow position:
               
chr22:23181021-23181274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
121-379
               

               
Cow position:
               
chr22:23833313-23833055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
122-340
               

               
Cow position:
               
chr22:30710423-30710191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr22:4563382-4563144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr22:9977830-9977601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
171, 82
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr22:21746665-21746422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 209
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr22:31646512-31646276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr22:40048577-40048345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
122-374
               

               
Cow position:
               
chr22:3993630-3993375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
122-374
               

               
Cow position:
               
chr22:18838272-18838016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
122-375
               

               
Cow position:
               
chr22:10532520-10532258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
122-375
               

               
Cow position:
               
chr22:34606603-34606354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:3317141-3316892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:5467341-5467606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:6215536-6215791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:15567996-15568258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:25742929-25743189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:34441613-34441871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr22:38439137-38439395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
122-377
               

               
Cow position:
               
chr22:14882092-14882351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr22:845923-845662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr22:21502765-21502495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
122-392
               

               
Cow position:
               
chr22:25237121-25237393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
123-333
               

               
Cow position:
               
chr22:12800688-12800469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
123-350
               

               
Cow position:
               
chr22:4974404-4974631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
123-355
               

               
Cow position:
               
chr22:11500798-11500562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
123-376
               

               
Cow position:
               
chr22:1991486-1991252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
123-379
               

               
Cow position:
               
chr22:27171247-27171500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
124-292
               

               
Cow position:
               
chr22:2912568-2912735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr22:10677972-10678177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
124-357
               

               
Cow position:
               
chr22:27431684-27431901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr22:13286473-13286207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr22:43812405-43812655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
124-377
               

               
Cow position:
               
chr22:4645791-4645537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr22:7913495-7913237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr22:8877283-8877030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
125-357
               

               
Cow position:
               
chr22:13951197-13950954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
126-297
               

               
Cow position:
               
chr22:15020382-15020560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
126-355
               

               
Cow position:
               
chr22:13769487-13769263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
126-395
               

               
Cow position:
               
chr22:2623502-2623771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
127-357
               

               
Cow position:
               
chr22:26141293-26141054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
128-353
               

               
Cow position:
               
chr22:3533950-3533734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
128-357
               

               
Cow position:
               
chr22:9127422-9127184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr22:24584049-24584272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
128-374
               

               
Cow position:
               
chr22:30712774-30712519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 242
               

               
Conread position:
               
128-379
               

               
Cow position:
               
chr22:17949958-17950198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
128-379
               

               
Cow position:
               
chr22:33094577-33094320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 139
               

               
Conread position:
               
129-286
               

               
Cow position:
               
chr22:16917198-16917352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
129-351
               

               
Cow position:
               
chr22:10363081-10362842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
129-354
               

               
Cow position:
               
chr22:14002479-14002263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 161
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr22:5042327-5042103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr22:10603397-10603174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr22:30818714-30818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr22:44717729-44717492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
129-379
               

               
Cow position:
               
chr22:2702244-2701987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
129-379
               

               
Cow position:
               
chr22:28731690-28731444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
130-376
               

               
Cow position:
               
chr22:45271595-45271344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
131-304
               

               
Cow position:
               
chr22:11497212-11497028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
131-345
               

               
Cow position:
               
chr22:1602201-1601977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr22:6360475-6360698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
131-351
               

               
Cow position:
               
chr22:15039173-15039397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
131-357
               

               
Cow position:
               
chr22:4993906-4994139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 145
               

               
Conread position:
               
131-357
               

               
Cow position:
               
chr22:33917887-33918117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
131-376
               

               
Cow position:
               
chr22:26749033-26749287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 170
               

               
Conread position:
               
131-376
               

               
Cow position:
               
chr22:28179869-28179606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
132-376
               

               
Cow position:
               
chr22:12777581-12777820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
132-376
               

               
Cow position:
               
chr22:25342026-25341783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr22:18654033-18654293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
133-357
               

               
Cow position:
               
chr22:10403493-10403714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
133-376
               

               
Cow position:
               
chr22:10683662-10683902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
134-365
               

               
Cow position:
               
chr22:18218881-18219119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
134-376
               

               
Cow position:
               
chr22:2216830-2216587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
134-377
               

               
Cow position:
               
chr22:3252945-3253176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
138-376
               

               
Cow position:
               
chr22:8767335-8767105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
139-376
               

               
Cow position:
               
chr22:9278893-9278666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr22:29954999-29955237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr22:20687299-20687056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
145-379
               

               
Cow position:
               
chr22:29256313-29256555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
146-357
               

               
Cow position:
               
chr22:1821875-1822093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
146-375
               

               
Cow position:
               
chr22:10631375-10631136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr22:26107055-26106817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr22:47582895-47582669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
149-376
               

               
Cow position:
               
chr22:2148565-2148332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
149-376
               

               
Cow position:
               
chr22:9734845-9734618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
149-376
               

               
Cow position:
               
chr22:32952469-32952236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
149-379
               

               
Cow position:
               
chr22:39472384-39472617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
151-376
               

               
Cow position:
               
chr22:33485612-33485840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
152-352
               

               
Cow position:
               
chr22:66420-66226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr22:20862777-20862986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
160-372
               

               
Cow position:
               
chr22:37817734-37817524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr22:3713244-3713028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
165-374
               

               
Cow position:
               
chr22:41982746-41982950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
165-376
               

               
Cow position:
               
chr22:2141782-2141577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
165-385
               

               
Cow position:
               
chr22:27512188-27512410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
166-356
               

               
Cow position:
               
chr22:41417170-41417355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr22:41971186-41971392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
166-379
               

               
Cow position:
               
chr22:29013850-29013637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
166-392
               

               
Cow position:
               
chr22:37554649-37554884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
167-376
               

               
Cow position:
               
chr22:30473017-30472809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
168-353
               

               
Cow position:
               
chr22:11211628-11211813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr22:19848425-19848612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
168-357
               

               
Cow position:
               
chr22:3945145-3944956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
168-376
               

               
Cow position:
               
chr22:8446909-8446693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
169-355
               

               
Cow position:
               
chr22:4026574-4026391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
169-376
               

               
Cow position:
               
chr22:14602429-14602632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
170-357
               

               
Cow position:
               
chr22:40071943-40071751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
170-377
               

               
Cow position:
               
chr22:30094212-30094007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
171-373
               

               
Cow position:
               
chr22:27581405-27581210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
172-352
               

               
Cow position:
               
chr22:30119190-30119006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
172-352
               

               
Cow position:
               
chr22:30136794-30136610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
172-359
               

               
Cow position:
               
chr22:2476244-2476431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
172-379
               

               
Cow position:
               
chr22:24066270-24066476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
173-379
               

               
Cow position:
               
chr22:6204326-6204535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
177-357
               

               
Cow position:
               
chr22:12381859-12381681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
177-372
               

               
Cow position:
               
chr22:10685129-10685321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr22:11837246-11837438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr22:27818964-27818766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
178-379
               

               
Cow position:
               
chr22:16235689-16235891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
178-379
               

               
Cow position:
               
chr22:34666007-34665811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
179-378
               

               
Cow position:
               
chr22:1590982-1590780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
181-326
               

               
Cow position:
               
chr22:3541765-3541907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
186-357
               

               
Cow position:
               
chr22:27701161-27700995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
187-379
               

               
Cow position:
               
chr22:38939997-38940190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
188-373
               

               
Cow position:
               
chr22:44386456-44386637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
188-379
               

               
Cow position:
               
chr22:13242391-13242195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
190-376
               

               
Cow position:
               
chr22:11987266-11987454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
191-375
               

               
Cow position:
               
chr22:36761575-36761394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
191-377
               

               
Cow position:
               
chr22:8302905-8303088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr22:28937960-28938144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
197-376
               

               
Cow position:
               
chr22:19376645-19376473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
203-376
               

               
Cow position:
               
chr22:45105983-45106155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
205-376
               

               
Cow position:
               
chr22:1710502-1710337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
206-357
               

               
Cow position:
               
chr22:31195005-31194855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr22:2433969-2433803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr22:33949071-33949239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr22:28356967-28356795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
206-378
               

               
Cow position:
               
chr22:2403804-2403632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
214-357
               

               
Cow position:
               
chr22:17339844-17339981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
214-376
               

               
Cow position:
               
chr22:14006071-14005915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
218-357
               

               
Cow position:
               
chr22:33985846-33985984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
218-379
               

               
Cow position:
               
chr22:5837154-5836992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
221-357
               

               
Cow position:
               
chr22:13720610-13720743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
221-373
               

               
Cow position:
               
chr22:41137228-41137080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
138, 25
               

               
Conread position:
               
223-376
               

               
Cow position:
               
chr22:22231573-22231421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
233-379
               

               
Cow position:
               
chr22:8329450-8329308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
241-376
               

               
Cow position:
               
chr22:15730759-15730624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-357
               

               
Cow position:
               
chr22:28120680-28120573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
257-375
               

               
Cow position:
               
chr22:32892581-32892459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
462-704
               

               
Cow position:
               
chr22:24639253-24639011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 140
               

               
Conread position:
               
496-835
               

               
Cow position:
               
chr22:23667852-23667503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
511-785
               

               
Cow position:
               
chr22:6361213-6360932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
557-791
               

               
Cow position:
               
chr22:20985617-20985374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
39, 14
               
Show alignments to all cow chromosomes.