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Cow genome map

           
Conread name:
           
Spl1-SPL010035C03
        

               
Conread position:
               
1-122
               

               
Cow position:
               
chr4:61351787-61351666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr4:19558860-19558517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr4:53209395-53208996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 211
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr4:36755879-36755509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 87
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr4:11671595-11671230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 267
               

               
Conread position:
               
9-357
               

               
Cow position:
               
chr4:67408665-67408316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 208
               

               
Conread position:
               
9-376
               

               
Cow position:
               
chr4:56853038-56852656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
69-313
               

               
Cow position:
               
chr4:42347214-42347462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
84-361
               

               
Cow position:
               
chr4:5623147-5623424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
90-379
               

               
Cow position:
               
chr4:60897231-60897518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
92-292
               

               
Cow position:
               
chr4:15439621-15439422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
92-357
               

               
Cow position:
               
chr4:20157368-20157634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
92-379
               

               
Cow position:
               
chr4:20279375-20279095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
95-206
               

               
Cow position:
               
chr4:45706085-45705973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
95-376
               

               
Cow position:
               
chr4:29291560-29291281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
95-377
               

               
Cow position:
               
chr4:49794705-49794435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
96-350
               

               
Cow position:
               
chr4:19314054-19313789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
97-377
               

               
Cow position:
               
chr4:22249405-22249687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
98-283
               

               
Cow position:
               
chr4:4827165-4826977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
99-353
               

               
Cow position:
               
chr4:53546065-53545814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
99-376
               

               
Cow position:
               
chr4:51123100-51122816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
99-376
               

               
Cow position:
               
chr4:52226044-52225768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
100-283
               

               
Cow position:
               
chr4:36577592-36577778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr4:43515758-43515522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr4:14920031-14919777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
100-371
               

               
Cow position:
               
chr4:21365452-21365172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
101-282
               

               
Cow position:
               
chr4:54171663-54171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
101-285
               

               
Cow position:
               
chr4:33091410-33091229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
101-340
               

               
Cow position:
               
chr4:16594123-16593878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 160
               

               
Conread position:
               
101-355
               

               
Cow position:
               
chr4:45583082-45583348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
101-358
               

               
Cow position:
               
chr4:10999678-10999927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
101-375
               

               
Cow position:
               
chr4:10992160-10992443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 147
               

               
Conread position:
               
101-375
               

               
Cow position:
               
chr4:18095633-18095919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
101-379
               

               
Cow position:
               
chr4:43865816-43866096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
31, 170
               

               
Conread position:
               
101-379
               

               
Cow position:
               
chr4:51867033-51866749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
101-379
               

               
Cow position:
               
chr4:59871516-59871249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 149
               

               
Conread position:
               
102-238
               

               
Cow position:
               
chr4:2774749-2774609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
102-347
               

               
Cow position:
               
chr4:45952343-45952586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
211, 102
               

               
Conread position:
               
102-352
               

               
Cow position:
               
chr4:39767390-39767128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr4:31172713-31172449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
102-357
               

               
Cow position:
               
chr4:12561065-12560814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
102-357
               

               
Cow position:
               
chr4:51083337-51083584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
102-376
               

               
Cow position:
               
chr4:9845954-9845680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
102-376
               

               
Cow position:
               
chr4:18439529-18439814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
102-379
               

               
Cow position:
               
chr4:4737051-4736794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
102-379
               

               
Cow position:
               
chr4:41185873-41186151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 166
               

               
Conread position:
               
104-357
               

               
Cow position:
               
chr4:37553007-37553266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
104-357
               

               
Cow position:
               
chr4:65825808-65826077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
104-376
               

               
Cow position:
               
chr4:43909781-43909511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
105-376
               

               
Cow position:
               
chr4:19542173-19541885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 164
               

               
Conread position:
               
106-346
               

               
Cow position:
               
chr4:23526726-23526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
106-357
               

               
Cow position:
               
chr4:3820454-3820200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
106-375
               

               
Cow position:
               
chr4:46258521-46258244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
106-376
               

               
Cow position:
               
chr4:45662480-45662741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
108-291
               

               
Cow position:
               
chr4:53346356-53346170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
108-354
               

               
Cow position:
               
chr4:14352655-14352900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
108-357
               

               
Cow position:
               
chr4:16736524-16736281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
108-375
               

               
Cow position:
               
chr4:33030582-33030318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
108-376
               

               
Cow position:
               
chr4:64072325-64072596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
108-379
               

               
Cow position:
               
chr4:19097319-19097047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 158
               

               
Conread position:
               
109-250
               

               
Cow position:
               
chr4:68280808-68280944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
110-280
               

               
Cow position:
               
chr4:37313197-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 140
               

               
Conread position:
               
110-307
               

               
Cow position:
               
chr4:27632475-27632281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
110-322
               

               
Cow position:
               
chr4:22741387-22741599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
110-340
               

               
Cow position:
               
chr4:1354597-1354819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr4:10968357-10968607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr4:26400988-26400734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
110-358
               

               
Cow position:
               
chr4:41441595-41441342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
110-376
               

               
Cow position:
               
chr4:14414315-14414587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
110-376
               

               
Cow position:
               
chr4:23847019-23847292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
110-376
               

               
Cow position:
               
chr4:34310426-34310696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
110-377
               

               
Cow position:
               
chr4:44024792-44025062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
110-378
               

               
Cow position:
               
chr4:51899035-51898758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr4:14743278-14743037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr4:44838865-44839107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr4:65824440-65824183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
112-238
               

               
Cow position:
               
chr4:37675643-37675507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
112-255
               

               
Cow position:
               
chr4:45074089-45073939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
112-266
               

               
Cow position:
               
chr4:18107130-18107291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
112-333
               

               
Cow position:
               
chr4:11496620-11496829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
112-350
               

               
Cow position:
               
chr4:45589572-45589806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
112-353
               

               
Cow position:
               
chr4:65815681-65815910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
112-354
               

               
Cow position:
               
chr4:47351829-47351586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
112-354
               

               
Cow position:
               
chr4:68764547-68764298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 242
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr4:13256112-13255871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr4:22725123-22724901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr4:41300967-41301213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 153
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr4:56591068-56590808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr4:22236454-22236717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr4:23646828-23647084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr4:32259819-32260088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr4:33612333-33612604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr4:62771894-62772175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
112-377
               

               
Cow position:
               
chr4:46456039-46456291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
112-378
               

               
Cow position:
               
chr4:11004704-11004959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:3850577-3850308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:9444661-9444934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:12004244-12003978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:13326925-13327203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:58248431-58248163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:66547742-66547998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
112-379
               

               
Cow position:
               
chr4:68944156-68944421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
113-287
               

               
Cow position:
               
chr4:38705744-38705927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr4:13941485-13941246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr4:25879420-25879175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
113-380
               

               
Cow position:
               
chr4:24187586-24187864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
115-379
               

               
Cow position:
               
chr4:22073297-22073554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
116-247
               

               
Cow position:
               
chr4:46494316-46494179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
116-302
               

               
Cow position:
               
chr4:45685479-45685300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr4:29805348-29805546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 135
               

               
Conread position:
               
116-310
               

               
Cow position:
               
chr4:54851096-54851295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr4:50769745-50769950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
116-349
               

               
Cow position:
               
chr4:25972922-25972682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr4:34165952-34166195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr4:8133518-8133755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr4:16602037-16602273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr4:45114583-45114828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr4:54146440-54146697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr4:61999426-61999676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr4:39128564-39128296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr4:54191111-54190857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
116-374
               

               
Cow position:
               
chr4:15623872-15623601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
116-375
               

               
Cow position:
               
chr4:3990607-3990865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
116-375
               

               
Cow position:
               
chr4:22138200-22138476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr4:3440422-3440165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr4:5797988-5797727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr4:22115631-22115365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr4:27561419-27561155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
116-376
               

               
Cow position:
               
chr4:37502839-37502580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
116-377
               

               
Cow position:
               
chr4:4672314-4672579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr4:12676825-12676568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr4:22528361-22528632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
116-382
               

               
Cow position:
               
chr4:23311238-23311512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
117-226
               

               
Cow position:
               
chr4:45563763-45563646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
117-243
               

               
Cow position:
               
chr4:12901537-12901667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
117-254
               

               
Cow position:
               
chr4:53126135-53125994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
117-256
               

               
Cow position:
               
chr4:24481648-24481790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
117-256
               

               
Cow position:
               
chr4:47280149-47280013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
117-259
               

               
Cow position:
               
chr4:2537213-2537064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
117-260
               

               
Cow position:
               
chr4:59873450-59873301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-285
               

               
Cow position:
               
chr4:47510410-47510235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-286
               

               
Cow position:
               
chr4:37732462-37732639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 175
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr4:61313192-61313360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr4:65950676-65950496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-288
               

               
Cow position:
               
chr4:59377930-59377761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
117-292
               

               
Cow position:
               
chr4:41370920-41371097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
117-298
               

               
Cow position:
               
chr4:9925608-9925794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr4:46720146-46720333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr4:52823392-52823573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr4:45711384-45711195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr4:21516982-21517187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
117-318
               

               
Cow position:
               
chr4:34369429-34369636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
117-328
               

               
Cow position:
               
chr4:19423401-19423191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
117-332
               

               
Cow position:
               
chr4:65175124-65175341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr4:27344657-27344869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr4:44676216-44675995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
117-338
               

               
Cow position:
               
chr4:13973949-13974175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
117-339
               

               
Cow position:
               
chr4:20933-20712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
117-340
               

               
Cow position:
               
chr4:30791989-30791759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
117-344
               

               
Cow position:
               
chr4:36929337-36929104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
117-345
               

               
Cow position:
               
chr4:66118512-66118737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
117-346
               

               
Cow position:
               
chr4:48322054-48321817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
117-353
               

               
Cow position:
               
chr4:19407976-19408218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
117-353
               

               
Cow position:
               
chr4:40414607-40414849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr4:24371839-24372070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr4:2602256-2602010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
117-355
               

               
Cow position:
               
chr4:27276523-27276761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
117-356
               

               
Cow position:
               
chr4:22344999-22345236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:508888-509120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:8705011-8704762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:11021630-11021872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 140
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:13435763-13435520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:19315984-19316222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:20502659-20502432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:22051450-22051691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:24118886-24119131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:25888811-25889055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:27755283-27755523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:28613850-28613599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:30974357-30974114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:31348165-31348416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:32726245-32726000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 157
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:41602870-41602626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:41867464-41867222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 147
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:44956161-44956412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:44973656-44973420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:45367760-45367511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:56239839-56240067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:63119218-63119453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
117-357
               

               
Cow position:
               
chr4:65650113-65650347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
117-361
               

               
Cow position:
               
chr4:16762705-16762958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
117-369
               

               
Cow position:
               
chr4:43749792-43750046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
117-370
               

               
Cow position:
               
chr4:5460840-5461095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
117-372
               

               
Cow position:
               
chr4:29237148-29237392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
117-373
               

               
Cow position:
               
chr4:5610064-5610313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
117-374
               

               
Cow position:
               
chr4:31506003-31506273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
117-375
               

               
Cow position:
               
chr4:17474460-17474195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:961630-961904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:1495387-1495641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:3837295-3837038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:4320981-4321247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:5999169-5999435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:19322057-19322320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 153
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:23451073-23451337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:31004388-31004646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:35982017-35981748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:37343148-37342876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:37935264-37935522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:39231500-39231764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:40823092-40823356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:44782395-44782133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:49424847-49424597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:51784201-51783940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:52748433-52748699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:55395784-55395527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:58834382-58834647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:59105804-59106052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr4:65841745-65842003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:123188-123443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:2610251-2609994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:18255873-18255620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:43894792-43895049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:45775317-45775585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:63349464-63349719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
117-377
               

               
Cow position:
               
chr4:66256707-66256443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr4:28836557-28836283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr4:56570827-56570561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr4:65432171-65431901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 217
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:638021-637753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:10732244-10731974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:12127618-12127892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:13668601-13668861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 157
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:15871712-15871967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:15905121-15904853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:34630919-34630657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:35939986-35940256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:36731211-36730945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:46060963-46060701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:58261129-58261398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
117-379
               

               
Cow position:
               
chr4:59785343-59785071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
117-384
               

               
Cow position:
               
chr4:37619867-37620138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr4:6653746-6653479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
118-255
               

               
Cow position:
               
chr4:26011870-26011727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
118-292
               

               
Cow position:
               
chr4:2099648-2099476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
118-303
               

               
Cow position:
               
chr4:4843224-4843415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
118-314
               

               
Cow position:
               
chr4:45077057-45077252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
118-333
               

               
Cow position:
               
chr4:29238024-29238241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
118-333
               

               
Cow position:
               
chr4:62983533-62983752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
118-337
               

               
Cow position:
               
chr4:29106927-29106697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr4:48152351-48152589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr4:58880941-58881188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:2894051-2893802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:5984026-5984267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:9137299-9137052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:17111853-17112099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:19463516-19463268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:19497243-19497472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:19549012-19548774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:21058356-21058608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:23911574-23911811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:24458083-24458320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:25356298-25356528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:25984236-25984006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:27530138-27529891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:27997707-27997463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:37915316-37915552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:45644295-45644534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:46591687-46591437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:55270749-55270983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
118-357
               

               
Cow position:
               
chr4:61897515-61897761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
118-358
               

               
Cow position:
               
chr4:26323760-26323510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
118-358
               

               
Cow position:
               
chr4:54930399-54930639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
118-368
               

               
Cow position:
               
chr4:43740554-43740289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
118-371
               

               
Cow position:
               
chr4:19744908-19744647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
118-372
               

               
Cow position:
               
chr4:21371411-21371157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
118-375
               

               
Cow position:
               
chr4:13590103-13589848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:3687942-3687687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 146
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:19700118-19699858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:21232854-21233112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:26659319-26659064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:34641706-34641970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:42921837-42922087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:47730878-47730621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:54455322-54455585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:61972443-61972716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr4:62472099-62471827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr4:19435275-19435017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr4:20327690-20327958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr4:22010035-22010301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
118-377
               

               
Cow position:
               
chr4:45738455-45738726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
118-378
               

               
Cow position:
               
chr4:13043283-13043026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
118-378
               

               
Cow position:
               
chr4:47290098-47289826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:570812-570555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:4981982-4981725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:11187471-11187212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:11201840-11201572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:17832881-17833150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:19265593-19265328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:19597304-19597558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:21065056-21064794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:25806919-25806654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:33623733-33623473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:36396109-36396369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:39456059-39455809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:42423785-42424046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:42673196-42672926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:50203774-50203502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:51630662-51630412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:51903625-51903357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:53100821-53100561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr4:54468283-54468541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
118-383
               

               
Cow position:
               
chr4:28172786-28173048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
119-260
               

               
Cow position:
               
chr4:52779869-52779722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
119-292
               

               
Cow position:
               
chr4:19501073-19501241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
119-293
               

               
Cow position:
               
chr4:48173155-48172980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
119-307
               

               
Cow position:
               
chr4:69543201-69543006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
119-321
               

               
Cow position:
               
chr4:22713474-22713681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
119-326
               

               
Cow position:
               
chr4:22546822-22547030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr4:13284403-13284172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr4:28543593-28543805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
119-346
               

               
Cow position:
               
chr4:29384213-29384430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
119-350
               

               
Cow position:
               
chr4:25359617-25359393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
119-355
               

               
Cow position:
               
chr4:285663-285434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
119-355
               

               
Cow position:
               
chr4:46550399-46550164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr4:25370132-25369895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr4:34208956-34208707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:3388563-3388322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:8770121-8769887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:8801527-8801285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:23509615-23509366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:23854199-23853982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:36893378-36893131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
119-357
               

               
Cow position:
               
chr4:38999440-38999204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr4:14470550-14470810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
119-375
               

               
Cow position:
               
chr4:16799167-16799433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:7480-7739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:10056229-10055970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:11897276-11897540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:12591195-12591452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:25197476-25197739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:31023471-31023200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:42481202-42480946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:45234854-45235101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
119-376
               

               
Cow position:
               
chr4:51851225-51850955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
119-377
               

               
Cow position:
               
chr4:33395679-33395932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
119-378
               

               
Cow position:
               
chr4:4084431-4084691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:13142544-13142776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:16339581-16339837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:18974442-18974192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:19307280-19307011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:19582598-19582861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:20139496-20139764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 167
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:24688326-24688594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:44613023-44612758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr4:47348848-47348587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
120-242
               

               
Cow position:
               
chr4:42253110-42253240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
120-340
               

               
Cow position:
               
chr4:51769124-51768907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 39
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr4:5629738-5629975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr4:14942329-14942098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr4:26746501-26746262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
120-357
               

               
Cow position:
               
chr4:48235645-48235417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr4:38799181-38799435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
120-376
               

               
Cow position:
               
chr4:9795362-9795612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
120-376
               

               
Cow position:
               
chr4:51739690-51739944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
120-377
               

               
Cow position:
               
chr4:54937911-54937644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
31, 150
               

               
Conread position:
               
120-378
               

               
Cow position:
               
chr4:203125-203392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr4:27665031-27664760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr4:34383323-34383583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 151
               

               
Conread position:
               
120-379
               

               
Cow position:
               
chr4:43148429-43148158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
121-355
               

               
Cow position:
               
chr4:25226966-25226713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
121-357
               

               
Cow position:
               
chr4:13222168-13222398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
121-376
               

               
Cow position:
               
chr4:10905448-10905700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
121-379
               

               
Cow position:
               
chr4:10412399-10412134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
121-379
               

               
Cow position:
               
chr4:17052576-17052843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
121-379
               

               
Cow position:
               
chr4:23445029-23445296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
121-379
               

               
Cow position:
               
chr4:34171565-34171814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
177, 40
               

               
Conread position:
               
122-308
               

               
Cow position:
               
chr4:16881349-16881536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr4:21391796-21392011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
122-351
               

               
Cow position:
               
chr4:11332109-11331873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr4:12049263-12049021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr4:46501360-46501132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr4:20299291-20299029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr4:28772051-28772308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr4:49629495-49629256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr4:52584340-52584622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
122-376
               

               
Cow position:
               
chr4:63964972-63965232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
122-378
               

               
Cow position:
               
chr4:2422592-2422338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr4:4085102-4085381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 233
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr4:19142292-19142044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
123-278
               

               
Cow position:
               
chr4:30929617-30929452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr4:20147198-20147010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr4:33869670-33869468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr4:22849701-22849932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr4:52166836-52167068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr4:65919626-65919395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
123-358
               

               
Cow position:
               
chr4:30690730-30690501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 139
               

               
Conread position:
               
123-376
               

               
Cow position:
               
chr4:65538402-65538649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
124-357
               

               
Cow position:
               
chr4:27687941-27687701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr4:479994-480248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
124-376
               

               
Cow position:
               
chr4:23600181-23599929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr4:11901547-11901808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr4:46597393-46597138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
125-304
               

               
Cow position:
               
chr4:806079-805888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
125-357
               

               
Cow position:
               
chr4:33357949-33357709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
125-357
               

               
Cow position:
               
chr4:68362937-68362720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
125-373
               

               
Cow position:
               
chr4:49158787-49159023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
125-376
               

               
Cow position:
               
chr4:19438478-19438217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
125-376
               

               
Cow position:
               
chr4:52631951-52632211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
126-285
               

               
Cow position:
               
chr4:68855657-68855501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr4:7430330-7430097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
126-379
               

               
Cow position:
               
chr4:10703677-10703930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
127-357
               

               
Cow position:
               
chr4:37465585-37465806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
128-287
               

               
Cow position:
               
chr4:48239442-48239603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
128-357
               

               
Cow position:
               
chr4:19542805-19542574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
128-357
               

               
Cow position:
               
chr4:19584726-19584482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
128-358
               

               
Cow position:
               
chr4:34924680-34924916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
128-375
               

               
Cow position:
               
chr4:22842351-22842105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
128-376
               

               
Cow position:
               
chr4:19708943-19708700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
129-258
               

               
Cow position:
               
chr4:58381448-58381313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
129-300
               

               
Cow position:
               
chr4:5047331-5047504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
129-348
               

               
Cow position:
               
chr4:65730911-65731133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
129-354
               

               
Cow position:
               
chr4:19561689-19561475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr4:63813301-63813523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr4:23059987-23060225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr4:43495906-43495679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
129-357
               

               
Cow position:
               
chr4:53999501-53999729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
129-374
               

               
Cow position:
               
chr4:56233691-56233448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
129-376
               

               
Cow position:
               
chr4:61214986-61215239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
129-379
               

               
Cow position:
               
chr4:16637595-16637843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
129-379
               

               
Cow position:
               
chr4:48137921-48137665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
130-282
               

               
Cow position:
               
chr4:69386095-69385946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr4:19238241-19238019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr4:22215645-22215900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr4:63859880-63860100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 134
               

               
Conread position:
               
131-357
               

               
Cow position:
               
chr4:43369839-43370072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 134
               

               
Conread position:
               
131-376
               

               
Cow position:
               
chr4:46275185-46274952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr4:63459202-63459459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
132-258
               

               
Cow position:
               
chr4:26683680-26683546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
132-377
               

               
Cow position:
               
chr4:56410184-56409939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr4:11090702-11090931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
132-406
               

               
Cow position:
               
chr4:36725047-36724771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
136-357
               

               
Cow position:
               
chr4:22744313-22744099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
136-383
               

               
Cow position:
               
chr4:1915576-1915827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
138-376
               

               
Cow position:
               
chr4:49089791-49089553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
139-357
               

               
Cow position:
               
chr4:656814-657040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
140-376
               

               
Cow position:
               
chr4:34210035-34209785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
140-376
               

               
Cow position:
               
chr4:65891990-65891750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
145-351
               

               
Cow position:
               
chr4:3475623-3475415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr4:10016610-10016824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr4:10915848-10916064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr4:53833039-53832823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr4:21531650-21531894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
146-357
               

               
Cow position:
               
chr4:11099675-11099891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
146-376
               

               
Cow position:
               
chr4:27540601-27540380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
146-377
               

               
Cow position:
               
chr4:1237122-1237360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr4:54501461-54501690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
147-377
               

               
Cow position:
               
chr4:4186106-4185877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
148-357
               

               
Cow position:
               
chr4:68233949-68233756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
148-358
               

               
Cow position:
               
chr4:8650221-8650017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
150-376
               

               
Cow position:
               
chr4:12903801-12903577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
150-376
               

               
Cow position:
               
chr4:66112090-66112318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
152-339
               

               
Cow position:
               
chr4:568886-568691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
152-379
               

               
Cow position:
               
chr4:30574435-30574211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
154-357
               

               
Cow position:
               
chr4:25906348-25906546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr4:16091426-16091641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
163-352
               

               
Cow position:
               
chr4:38935327-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
165-312
               

               
Cow position:
               
chr4:38887165-38887314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
165-357
               

               
Cow position:
               
chr4:48485960-48485778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
166-354
               

               
Cow position:
               
chr4:39009933-39009746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr4:11871943-11872134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr4:34337306-34337492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
166-358
               

               
Cow position:
               
chr4:23558461-23558263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
167-356
               

               
Cow position:
               
chr4:23555225-23555030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr4:61869874-61870068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
167-376
               

               
Cow position:
               
chr4:24415253-24415046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
167-376
               

               
Cow position:
               
chr4:53763156-53763359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
167-411
               

               
Cow position:
               
chr4:43763020-43762763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
168-329
               

               
Cow position:
               
chr4:3462083-3462242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
170-357
               

               
Cow position:
               
chr4:53447703-53447888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
170-357
               

               
Cow position:
               
chr4:57555934-57555744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
170-384
               

               
Cow position:
               
chr4:46370780-46370555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
171-357
               

               
Cow position:
               
chr4:46708562-46708750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
172-357
               

               
Cow position:
               
chr4:21259178-21258994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
172-357
               

               
Cow position:
               
chr4:22860751-22860928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr4:22259464-22259660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr4:43542775-43542974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 5
               

               
Conread position:
               
172-379
               

               
Cow position:
               
chr4:67392920-67392725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
173-376
               

               
Cow position:
               
chr4:57931874-57931669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
174-377
               

               
Cow position:
               
chr4:2536785-2536587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
174-379
               

               
Cow position:
               
chr4:26307542-26307745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
175-357
               

               
Cow position:
               
chr4:43295735-43295914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
175-379
               

               
Cow position:
               
chr4:59008412-59008614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
177-335
               

               
Cow position:
               
chr4:3689659-3689508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
177-354
               

               
Cow position:
               
chr4:46058795-46058970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
177-357
               

               
Cow position:
               
chr4:23570760-23570575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr4:18576816-18577017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr4:31136708-31136514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
177-379
               

               
Cow position:
               
chr4:2141703-2141501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
177-379
               

               
Cow position:
               
chr4:33421402-33421606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr4:63365420-63365619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
179-331
               

               
Cow position:
               
chr4:29813590-29813737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
179-357
               

               
Cow position:
               
chr4:56513989-56514161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
179-376
               

               
Cow position:
               
chr4:54667733-54667932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
180-357
               

               
Cow position:
               
chr4:44072812-44072992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
181-376
               

               
Cow position:
               
chr4:12259828-12260022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
182-376
               

               
Cow position:
               
chr4:41292029-41292221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
183-355
               

               
Cow position:
               
chr4:59277529-59277700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
188-376
               

               
Cow position:
               
chr4:46668513-46668329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr4:5850382-5850575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr4:7571355-7571165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
190-376
               

               
Cow position:
               
chr4:42232602-42232423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
191-379
               

               
Cow position:
               
chr4:26163030-26163215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
194-379
               

               
Cow position:
               
chr4:23573487-23573296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
196-357
               

               
Cow position:
               
chr4:26549392-26549241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
201-357
               

               
Cow position:
               
chr4:13693745-13693900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
201-376
               

               
Cow position:
               
chr4:64040030-64039867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
203-383
               

               
Cow position:
               
chr4:33970971-33971146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
206-357
               

               
Cow position:
               
chr4:23568068-23567914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
206-357
               

               
Cow position:
               
chr4:41907868-41908014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr4:27292032-27292200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
206-379
               

               
Cow position:
               
chr4:620226-620398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
206-379
               

               
Cow position:
               
chr4:7249645-7249814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
210-376
               

               
Cow position:
               
chr4:15462356-15462514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
213-357
               

               
Cow position:
               
chr4:10472140-10472001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
227-378
               

               
Cow position:
               
chr4:45724516-45724373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
233-379
               

               
Cow position:
               
chr4:40576022-40576161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
237-379
               

               
Cow position:
               
chr4:46385679-46385823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
251-376
               

               
Cow position:
               
chr4:38945929-38945804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
259-357
               

               
Cow position:
               
chr4:9442-9538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
365-579
               

               
Cow position:
               
chr4:8178330-8178547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
477-703
               

               
Cow position:
               
chr4:12701635-12701861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
498-804
               

               
Cow position:
               
chr4:47408089-47407783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
542-805
               

               
Cow position:
               
chr4:45599202-45598927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
557-836
               

               
Cow position:
               
chr4:8179079-8179357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               
Show alignments to all cow chromosomes.