Cow genome map
| Conread name: | Spl1-SPL010041F03 |
| Conread position: | 451-736 |
| Cow position: | chr1:14236835-14236556 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 473-788 |
| Cow position: | chr1:41580322-41580012 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 476-734 |
| Cow position: | chr1:32222231-32222500 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 484-682 |
| Cow position: | chr1:44202754-44202948 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 484-787 |
| Cow position: | chr1:64904025-64903725 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 484-797 |
| Cow position: | chr1:58801771-58801456 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 485-803 |
| Cow position: | chr1:57185827-57186131 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 488-806 |
| Cow position: | chr1:100911482-100911173 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 528-803 |
| Cow position: | chr1:20108196-20108460 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 533-802 |
| Cow position: | chr1:42745718-42745977 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 553-734 |
| Cow position: | chr1:81752562-81752390 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 581-730 |
| Cow position: | chr1:88724563-88724417 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 581-755 |
| Cow position: | chr1:26826120-26826287 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 581-794 |
| Cow position: | chr1:78987269-78987486 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 581-806 |
| Cow position: | chr1:10995681-10995905 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 23, 157 |
| Conread position: | 583-737 |
| Cow position: | chr1:85322911-85322757 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 583-794 |
| Cow position: | chr1:32509500-32509293 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 586-789 |
| Cow position: | chr1:42576824-42577023 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 197, 33 |
| Conread position: | 587-737 |
| Cow position: | chr1:15911991-15911841 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 592-736 |
| Cow position: | chr1:48418288-48418431 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 606-803 |
| Cow position: | chr1:10842269-10842073 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 620-802 |
| Cow position: | chr1:62873406-62873226 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 134 |
| Conread position: | 627-806 |
| Cow position: | chr1:20095082-20095256 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 641-787 |
| Cow position: | chr1:26855330-26855476 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 657-787 |
| Cow position: | chr1:15999387-15999516 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 657-806 |
| Cow position: | chr1:54626663-54626809 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.