Cow genome map
| Conread name: | Spl1-SPL010041F03 |
| Conread position: | 484-681 |
| Cow position: | chr5:54738204-54738397 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 484-736 |
| Cow position: | chr5:8395403-8395146 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 484-806 |
| Cow position: | chr5:18696350-18696665 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 492-774 |
| Cow position: | chr5:21573460-21573188 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 112, 74 |
| Conread position: | 492-794 |
| Cow position: | chr5:47479371-47479674 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 502-733 |
| Cow position: | chr5:18555359-18555586 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 517-736 |
| Cow position: | chr5:56870864-56870653 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 161, 46 |
| Conread position: | 525-733 |
| Cow position: | chr5:21529836-21529631 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 528-806 |
| Cow position: | chr5:29246874-29247141 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 198, 38 |
| Conread position: | 552-773 |
| Cow position: | chr5:30079779-30079569 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 552-793 |
| Cow position: | chr5:59973910-59973674 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 553-806 |
| Cow position: | chr5:30474598-30474850 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 581-806 |
| Cow position: | chr5:4315621-4315843 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 581-806 |
| Cow position: | chr5:9522332-9522563 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 587-733 |
| Cow position: | chr5:38617736-38617876 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 606-804 |
| Cow position: | chr5:38267046-38267237 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 612-784 |
| Cow position: | chr5:70058346-70058181 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 166, 26 |
| Conread position: | 625-803 |
| Cow position: | chr5:33267752-33267931 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 657-780 |
| Cow position: | chr5:68952093-68952217 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 657-803 |
| Cow position: | chr5:1251353-1251497 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 660-803 |
| Cow position: | chr5:32989942-32990082 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 79 |
Show alignments to all cow chromosomes.