Cow genome map
| Conread name: | Spl1-SPL010041F03 |
| Conread position: | 477-806 |
| Cow position: | chrX:19066934-19066625 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 484-734 |
| Cow position: | chrX:27958213-27957967 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 83 |
| Conread position: | 484-772 |
| Cow position: | chrX:38533535-38533255 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 484-798 |
| Cow position: | chrX:4835675-4835370 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 484-803 |
| Cow position: | chrX:2375061-2374754 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 484-806 |
| Cow position: | chrX:23908199-23907888 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 502-804 |
| Cow position: | chrX:25043911-25044200 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 506-735 |
| Cow position: | chrX:30848104-30848329 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 552-775 |
| Cow position: | chrX:13989191-13989396 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 553-787 |
| Cow position: | chrX:40111384-40111610 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 553-806 |
| Cow position: | chrX:7087650-7087407 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 554-732 |
| Cow position: | chrX:8502685-8502511 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 554-798 |
| Cow position: | chrX:13918442-13918203 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 560-803 |
| Cow position: | chrX:6029250-6029485 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 581-736 |
| Cow position: | chrX:15277421-15277580 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 117 |
| Conread position: | 581-806 |
| Cow position: | chrX:23118631-23118409 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 583-806 |
| Cow position: | chrX:41408535-41408316 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 586-803 |
| Cow position: | chrX:316102-316317 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 607-727 |
| Cow position: | chrX:36112310-36112190 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 616-803 |
| Cow position: | chrX:39434735-39434550 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 76, 126 |
| Conread position: | 617-806 |
| Cow position: | chrX:1095779-1095582 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 631-792 |
| Cow position: | chrX:27719374-27719530 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 657-806 |
| Cow position: | chrX:32778755-32778605 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 658-802 |
| Cow position: | chrX:3076888-3076742 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.