Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-230
Cow position: chr12:9886358-9886580 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 1-243
Cow position: chr12:27439034-27439265 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 22

Conread position: 1-254
Cow position: chr12:18724401-18724156 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-257
Cow position: chr12:27929076-27929324 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-259
Cow position: chr12:28763365-28763615 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 1-267
Cow position: chr12:37562650-37562396 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 0

Conread position: 1-268
Cow position: chr12:30142060-30141808 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 1-268
Cow position: chr12:38774726-38774480 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 1-269
Cow position: chr12:21718522-21718782 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-269
Cow position: chr12:24981357-24981098 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position: chr12:1408483-1408224 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 1-271
Cow position: chr12:550963-551225 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:759047-758793 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr12:1093551-1093288 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:1437116-1437377 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr12:1774257-1774526 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 164, 124

Conread position: 1-271
Cow position: chr12:1849461-1849726 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 1-271
Cow position: chr12:1855209-1855471 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:3181059-3180797 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:3545302-3545040 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:3716626-3716885 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 1-271
Cow position: chr12:5146218-5145948 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 158

Conread position: 1-271
Cow position: chr12:5226880-5226622 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:5273718-5273976 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 51

Conread position: 1-271
Cow position: chr12:5905175-5904920 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 1-271
Cow position: chr12:6186501-6186761 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr12:6404137-6404399 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:8673799-8674063 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 185

Conread position: 1-271
Cow position: chr12:8841398-8841670 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 176

Conread position: 1-271
Cow position: chr12:10790596-10790858 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:11101898-11101636 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:11582802-11582548 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 95

Conread position: 1-271
Cow position: chr12:12928260-12928522 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:15231677-15231419 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:17663597-17663337 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 49

Conread position: 1-271
Cow position: chr12:20218146-20217883 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 158

Conread position: 1-271
Cow position: chr12:20994105-20994378 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 253

Conread position: 1-271
Cow position: chr12:21313766-21314043 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 171, 95

Conread position: 1-271
Cow position: chr12:21905019-21904745 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 27

Conread position: 1-271
Cow position: chr12:22202031-22202293 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-271
Cow position: chr12:22480768-22480513 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-271
Cow position: chr12:22748866-22748604 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:22975609-22975870 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 136, 45

Conread position: 1-271
Cow position: chr12:22979243-22979505 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:23099377-23099657 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 1-271
Cow position: chr12:24020119-24019847 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 23, 167

Conread position: 1-271
Cow position: chr12:24028833-24029094 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:24558220-24557964 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 1-271
Cow position: chr12:25260102-25260364 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:25265683-25265945 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:25313064-25313325 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-271
Cow position: chr12:26268566-26268828 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:27506000-27506261 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr12:27852004-27852262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:28012581-28012843 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:30011321-30011578 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 1-271
Cow position: chr12:30016428-30016685 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 1-271
Cow position: chr12:32849222-32848947 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 176

Conread position: 1-271
Cow position: chr12:33297279-33297018 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 1-271
Cow position: chr12:35163433-35163166 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:35248607-35248862 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-271
Cow position: chr12:36287361-36287627 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 1-271
Cow position: chr12:36446035-36445774 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:37697826-37698085 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-271
Cow position: chr12:39610759-39611017 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 1-271
Cow position: chr12:40867983-40867721 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:41337579-41337844 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 168

Conread position: 1-271
Cow position: chr12:43681653-43681393 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 76

Conread position: 1-271
Cow position: chr12:46111467-46111729 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr12:47415451-47415193 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 1-287
Cow position: chr12:31328680-31328960 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 114

Conread position: 1-289
Cow position: chr12:18421570-18421859 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 96, 23

Conread position: 1-297
Cow position: chr12:22286285-22286575 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 2-269
Cow position: chr12:21723763-21723502 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 2-271
Cow position: chr12:249673-249932 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 2-271
Cow position: chr12:11558492-11558761 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 127

Conread position: 2-271
Cow position: chr12:13042590-13042853 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 183

Conread position: 2-271
Cow position: chr12:15925103-15925365 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 165

Conread position: 2-271
Cow position: chr12:19155206-19155474 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 197, 44

Conread position: 2-271
Cow position: chr12:23441284-23441551 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 156, 101

Conread position: 2-271
Cow position: chr12:32011128-32011389 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 5-243
Cow position: chr12:29499047-29499270 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 5-269
Cow position: chr12:44766475-44766221 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 5-271
Cow position: chr12:10931731-10931473 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 48

Conread position: 5-271
Cow position: chr12:21057069-21057325 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 18, 129

Conread position: 5-271
Cow position: chr12:23475396-23475139 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr12:23490866-23491122 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 7-268
Cow position: chr12:3070506-3070249 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 7-271
Cow position: chr12:5800424-5800168 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 7-271
Cow position: chr12:15939237-15939490 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 7-271
Cow position: chr12:28707981-28708235 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 8-271
Cow position: chr12:15821362-15821110 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 8-271
Cow position: chr12:32088878-32088627 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 9-271
Cow position: chr12:12177596-12177853 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 10-271
Cow position: chr12:25365390-25365634 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 142, 27

Conread position: 10-271
Cow position: chr12:31869058-31868806 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 117, 143

Conread position: 13-236
Cow position: chr12:21579147-21579363 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 0

Conread position: 13-258
Cow position: chr12:41185208-41184971 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-267
Cow position: chr12:12788117-12788363 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-267
Cow position: chr12:34365827-34365581 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-270
Cow position: chr12:464972-465221 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-270
Cow position: chr12:6530230-6529980 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 154

Conread position: 13-270
Cow position: chr12:32700403-32700154 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-270
Cow position: chr12:34177193-34176944 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:1055871-1056120 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:2229209-2228959 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:5110429-5110676 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 13-271
Cow position: chr12:7674540-7674290 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:8542241-8542487 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:8770399-8770150 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:8839892-8839642 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:14214699-14214449 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:14568186-14568436 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:14940603-14940353 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:15719932-15720178 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 13-271
Cow position: chr12:17718934-17718688 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 13-271
Cow position: chr12:17787003-17787253 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:21212422-21212171 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 13-271
Cow position: chr12:21250676-21250926 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:21432980-21432728 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:21665776-21665524 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 172

Conread position: 13-271
Cow position: chr12:21672296-21672546 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:22517211-22517466 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position: chr12:23137690-23137940 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:25147980-25148230 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:26333359-26333109 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:30593470-30593718 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:31027182-31027432 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:32146992-32147241 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 13-271
Cow position: chr12:32900514-32900764 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:32917965-32917718 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 13-271
Cow position: chr12:35459397-35459147 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:38894001-38893752 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 13-271
Cow position: chr12:39930803-39930553 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:43533725-43533475 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr12:44758061-44757811 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-272
Cow position: chr12:10227379-10227129 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 40

Conread position: 13-320
Cow position: chr12:37832287-37831988 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 14-259
Cow position: chr12:46104700-46104937 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 15-270
Cow position: chr12:43103458-43103201 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 154

Conread position: 15-271
Cow position: chr12:10076294-10076046 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 17-243
Cow position: chr12:18116034-18115819 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 108, 0

Conread position: 27-271
Cow position: chr12:19871860-19871602 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 141

Conread position: 32-271
Cow position: chr12:27994718-27994489 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 34-287
Cow position: chr12:31533226-31533473 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 146

Conread position: 35-271
Cow position: chr12:21452361-21452589 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 36-271
Cow position: chr12:21557562-21557335 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 215, 130

Conread position: 36-272
Cow position: chr12:6491698-6491925 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 211, 132

Conread position: 38-271
Cow position: chr12:30240532-30240300 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 45-271
Cow position: chr12:14852655-14852872 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 42

Conread position: 46-269
Cow position: chr12:4004300-4004514 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 120, 0

Conread position: 47-271
Cow position: chr12:47928696-47928487 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 53-269
Cow position: chr12:23039678-23039886 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 0

Conread position: 55-268
Cow position: chr12:26869653-26869865 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 15, 114

Conread position: 57-271
Cow position: chr12:16301744-16301950 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 109, 0

Conread position: 57-271
Cow position: chr12:19868824-19868617 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 90, 40

Conread position: 57-271
Cow position: chr12:27957931-27958137 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 109, 0

Conread position: 57-271
Cow position: chr12:40514713-40514505 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 105, 128

Conread position: 58-232
Cow position: chr12:21497310-21497481 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 122, 50

Conread position: 60-271
Cow position: chr12:564868-564660 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 109

Conread position: 62-271
Cow position: chr12:48416154-48416353 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 94

Conread position: 65-271
Cow position: chr12:10988940-10988743 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 67-271
Cow position: chr12:34103734-34103935 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 69-232
Cow position: chr12:41737263-41737416 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr12:18586254-18586061 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 69-271
Cow position: chr12:20459140-20459334 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 69-271
Cow position: chr12:48436081-48436282 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 16

Conread position: 70-227
Cow position: chr12:6105788-6105937 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 73-271
Cow position: chr12:1057981-1058166 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 80-271
Cow position: chr12:17969534-17969357 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 38

Conread position: 81-270
Cow position: chr12:21202400-21202219 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 81-271
Cow position: chr12:14522950-14522765 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 90

Conread position: 84-271
Cow position: chr12:6686503-6686323 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 0

Conread position: 86-271
Cow position: chr12:36149108-36149285 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 87-271
Cow position: chr12:28571936-28571764 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 102-271
Cow position: chr12:24206079-24205918 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 103-271
Cow position: chr12:36568779-36568957 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 104-271
Cow position: chr12:5107605-5107446 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 104-271
Cow position: chr12:32657093-32656937 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 109-271
Cow position: chr12:25096726-25096877 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 130-271
Cow position: chr12:6954834-6954704 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.