Cow genome map
| Conread name: | Spl1-SPL01A020032 |
| Conread position: | 1-227 |
| Cow position: | chr18:43563627-43563415 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-243 |
| Cow position: | chr18:35637564-35637334 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 1-247 |
| Cow position: | chr18:24293270-24293033 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 1-249 |
| Cow position: | chr18:27540173-27539933 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-252 |
| Cow position: | chr18:16390478-16390721 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 167 |
| Conread position: | 1-252 |
| Cow position: | chr18:17944267-17944018 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 171 |
| Conread position: | 1-258 |
| Cow position: | chr18:22275632-22275888 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 1-259 |
| Cow position: | chr18:36133502-36133255 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 170, 124 |
| Conread position: | 1-264 |
| Cow position: | chr18:5570272-5570023 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-264 |
| Cow position: | chr18:25003463-25003712 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-265 |
| Cow position: | chr18:7965679-7965434 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-265 |
| Cow position: | chr18:40722074-40721831 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-266 |
| Cow position: | chr18:3150810-3151066 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-266 |
| Cow position: | chr18:51487160-51487414 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-267 |
| Cow position: | chr18:7964304-7964048 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-268 |
| Cow position: | chr18:25924120-25923862 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 1-268 |
| Cow position: | chr18:33501233-33501488 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-268 |
| Cow position: | chr18:37509709-37509454 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-268 |
| Cow position: | chr18:45614528-45614271 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 1-269 |
| Cow position: | chr18:5076432-5076693 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 175 |
| Conread position: | 1-269 |
| Cow position: | chr18:5536721-5536464 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-270 |
| Cow position: | chr18:2853037-2853298 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 167 |
| Conread position: | 1-270 |
| Cow position: | chr18:4949910-4949648 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 15 |
| Conread position: | 1-270 |
| Cow position: | chr18:14127537-14127796 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 1-270 |
| Cow position: | chr18:21574408-21574151 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-270 |
| Cow position: | chr18:28929703-28929948 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-270 |
| Cow position: | chr18:40342096-40342358 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-270 |
| Cow position: | chr18:41238276-41238021 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:7946448-7946193 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:9365294-9365040 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:12269906-12269642 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:14419728-14419466 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:15172582-15172336 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:16082237-16081978 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 27 |
| Conread position: | 1-271 |
| Cow position: | chr18:16134910-16135177 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 26 |
| Conread position: | 1-271 |
| Cow position: | chr18:16226971-16226711 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:16437834-16437582 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:16641199-16640937 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:16857536-16857274 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:17324126-17323864 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:22790663-22790922 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:23659144-23659406 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 26 |
| Conread position: | 1-271 |
| Cow position: | chr18:24453537-24453282 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 93 |
| Conread position: | 1-271 |
| Cow position: | chr18:25355266-25355010 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:26242709-26242970 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:26306016-26305761 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 1-271 |
| Cow position: | chr18:27194254-27193992 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:27529747-27529482 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 141 |
| Conread position: | 1-271 |
| Cow position: | chr18:27800133-27800392 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:27833676-27833937 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:27990508-27990246 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:27995430-27995168 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:28927856-28928116 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:28968538-28968800 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:29079488-29079226 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:29862857-29863115 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:30248713-30248973 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:30844155-30844417 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:32121932-32122194 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 1-271 |
| Cow position: | chr18:32210064-32210323 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:33498227-33498485 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 1-271 |
| Cow position: | chr18:33522983-33522707 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 165 |
| Conread position: | 1-271 |
| Cow position: | chr18:36122107-36122369 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:36224185-36223923 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:36233122-36233384 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:36336307-36336568 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:36512378-36512123 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:37692534-37692796 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:38157795-38158053 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:38341796-38342048 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 192, 23 |
| Conread position: | 1-271 |
| Cow position: | chr18:39002394-39002640 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:40484748-40484488 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 1-271 |
| Cow position: | chr18:41837339-41837601 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:42629115-42628853 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:42746981-42746712 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 78 |
| Conread position: | 1-271 |
| Cow position: | chr18:48300718-48300977 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:51459094-51459356 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:51485338-51485076 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:51601916-51602176 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:51692071-51692332 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 46 |
| Conread position: | 1-271 |
| Cow position: | chr18:51698390-51698129 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:51713312-51713574 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 1-271 |
| Cow position: | chr18:52629507-52629769 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:52656547-52656283 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 1-271 |
| Cow position: | chr18:54033446-54033197 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-271 |
| Cow position: | chr18:55136729-55136985 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 1-272 |
| Cow position: | chr18:43430749-43430491 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-297 |
| Cow position: | chr18:14479867-14479591 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 277, 52 |
| Conread position: | 1-297 |
| Cow position: | chr18:50789481-50789191 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-269 |
| Cow position: | chr18:17670222-17670480 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 2-271 |
| Cow position: | chr18:1144800-1145062 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 2-271 |
| Cow position: | chr18:11271253-11271510 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 2-271 |
| Cow position: | chr18:16172868-16173124 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-271 |
| Cow position: | chr18:18860960-18860684 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 2-271 |
| Cow position: | chr18:29797334-29797596 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 2-271 |
| Cow position: | chr18:37862043-37862301 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-271 |
| Cow position: | chr18:47518054-47518311 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 122 |
| Conread position: | 2-271 |
| Cow position: | chr18:51251415-51251160 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 2-271 |
| Cow position: | chr18:51272389-51272647 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 262, 55 |
| Conread position: | 5-268 |
| Cow position: | chr18:16094627-16094377 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-270 |
| Cow position: | chr18:43638138-43637880 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-271 |
| Cow position: | chr18:17334997-17335252 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 5-271 |
| Cow position: | chr18:23802767-23802512 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 5-271 |
| Cow position: | chr18:29585865-29586123 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 5-271 |
| Cow position: | chr18:43464023-43464283 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 162 |
| Conread position: | 6-244 |
| Cow position: | chr18:52696614-52696390 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-271 |
| Cow position: | chr18:14048108-14047856 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 7-271 |
| Cow position: | chr18:33607977-33607716 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 8-266 |
| Cow position: | chr18:30716643-30716888 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-270 |
| Cow position: | chr18:50092701-50092954 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 8-271 |
| Cow position: | chr18:6733226-6733476 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 9-270 |
| Cow position: | chr18:33851285-33851019 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 170, 156 |
| Conread position: | 9-271 |
| Cow position: | chr18:19310893-19310641 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 13-269 |
| Cow position: | chr18:35012913-35013159 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:602726-602975 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:10292467-10292220 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:13270641-13270399 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:17742236-17741986 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:18215283-18215524 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:19462019-19461769 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:24037112-24037357 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:24620158-24619912 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:30607435-30607185 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:33616683-33616933 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:35443638-35443888 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:36134899-36135149 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:37733428-37733178 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:42608937-42609187 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:42622977-42623227 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:51346027-51345777 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:51580046-51580296 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:52574842-52574590 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 155 |
| Conread position: | 13-271 |
| Cow position: | chr18:54047618-54047368 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:55022539-55022289 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 13-271 |
| Cow position: | chr18:55554990-55554740 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 14-271 |
| Cow position: | chr18:15324330-15324579 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 14-271 |
| Cow position: | chr18:55436396-55436645 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-271 |
| Cow position: | chr18:44261791-44261554 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 17-271 |
| Cow position: | chr18:3190479-3190233 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 17-271 |
| Cow position: | chr18:47745487-47745242 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 20-271 |
| Cow position: | chr18:51679483-51679719 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 28-271 |
| Cow position: | chr18:29059093-29059332 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 106, 97 |
| Conread position: | 31-271 |
| Cow position: | chr18:11866743-11866505 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 132, 37 |
| Conread position: | 33-269 |
| Cow position: | chr18:51309616-51309391 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 33-271 |
| Cow position: | chr18:23473131-23473358 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 34-271 |
| Cow position: | chr18:4369628-4369858 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 83, 133 |
| Conread position: | 38-270 |
| Cow position: | chr18:6006104-6006347 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 142, 87 |
| Conread position: | 45-271 |
| Cow position: | chr18:31996640-31996424 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 49-267 |
| Cow position: | chr18:36477487-36477269 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 136, 81 |
| Conread position: | 49-271 |
| Cow position: | chr18:25200461-25200247 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 57-271 |
| Cow position: | chr18:21579859-21580065 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 59-271 |
| Cow position: | chr18:51690490-51690286 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 61-268 |
| Cow position: | chr18:31563784-31563981 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 69-271 |
| Cow position: | chr18:8965975-8965780 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 110, 46 |
| Conread position: | 69-271 |
| Cow position: | chr18:23701120-23701314 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 70-271 |
| Cow position: | chr18:11870169-11869976 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 76-271 |
| Cow position: | chr18:32245651-32245834 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 90-271 |
| Cow position: | chr18:23688834-23688661 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 103-271 |
| Cow position: | chr18:16025005-16025168 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 114-271 |
| Cow position: | chr18:43284681-43284830 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 118-270 |
| Cow position: | chr18:27457437-27457593 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 139-271 |
| Cow position: | chr18:45905255-45905385 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 27 |
Show alignments to all cow chromosomes.