Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 1-237
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 164, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 1-246
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 108

Conread position: 1-257
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 136, 56

Conread position: 1-258
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-260
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 1-265
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 119

Conread position: 1-265
Cow position:
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 26

Conread position: 1-267
Cow position:
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-267
Cow position:
Alignm length: 267
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-269
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 1-270
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 184

Conread position: 1-270
Cow position:
Alignm length: 274
Alignm identity: 201
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 82, 133

Conread position: 1-270
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 1-270
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 136, 112

Conread position: 1-270
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 40

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 52

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-271
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 169

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 158

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 107

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 1-271
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 52

Conread position: 1-271
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 76

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 103

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 42

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 252, 52

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 168

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 21

Conread position: 1-288
Cow position:
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 188, 46

Conread position: 2-269
Cow position:
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 88

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 2-271
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 117

Conread position: 2-271
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 37

Conread position: 5-271
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 34

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 5-271
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 167

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 0

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position:
Alignm length: 269
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 164, 105

Conread position: 5-287
Cow position:
Alignm length: 283
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 7-266
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 7-270
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 7-271
Cow position:
Alignm length: 268
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 162

Conread position: 7-271
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 108, 0

Conread position: 7-271
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 167

Conread position: 8-269
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 158

Conread position: 10-271
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 11-271
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 8

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 157

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 13-271
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 135, 58

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 172

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-274
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 15-271
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 16-271
Cow position:
Alignm length: 256
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 18-271
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 25-270
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 44

Conread position: 29-267
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 232, 17

Conread position: 29-270
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 33-271
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 133

Conread position: 33-271
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 92, 0

Conread position: 33-271
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 37-271
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 39-271
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 128

Conread position: 42-271
Cow position:
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 45-241
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 148, 135

Conread position: 45-272
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 123

Conread position: 49-271
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 0

Conread position: 49-271
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 50-284
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 59

Conread position: 51-271
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 116

Conread position: 53-271
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 131

Conread position: 56-271
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 10

Conread position: 57-271
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 57-271
Cow position:
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 60-271
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 0

Conread position: 66-258
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 0

Conread position: 69-271
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 168, 35

Conread position: 69-271
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 76

Conread position: 71-269
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 71-270
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 124

Conread position: 81-271
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 86-270
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 109-271
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 113-271
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 113-271
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 117-245
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 48

Conread position: 120-271
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.