Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-242
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 138, 171

Conread position: 1-257
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 167

Conread position: 1-262
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 192, 75

Conread position: 1-267
Cow position:
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position:
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 166

Conread position: 1-269
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 1-269
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 177

Conread position: 1-270
Cow position:
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 167

Conread position: 1-270
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 165, 64

Conread position: 1-270
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 143

Conread position: 1-270
Cow position:
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 136, 103

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 1-271
Cow position:
Alignm length: 276
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 184, 0

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 102

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 184

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 28, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 127

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 167

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 163, 184

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 56

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 124

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 277
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 93, 48

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 165

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-272
Cow position:
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-272
Cow position:
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 55

Conread position: 2-237
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-270
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 217, 67

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 2-271
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 167, 240

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 175, 0

Conread position: 5-283
Cow position:
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 48

Conread position: 6-271
Cow position:
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 161

Conread position: 7-268
Cow position:
Alignm length: 263
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 15

Conread position: 7-271
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 12

Conread position: 7-271
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 169, 89

Conread position: 7-271
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 7-271
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 145, 0

Conread position: 7-271
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 148, 41

Conread position: 7-284
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 257, 32

Conread position: 8-270
Cow position:
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 100

Conread position: 8-271
Cow position:
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 8-271
Cow position:
Alignm length: 267
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 178

Conread position: 9-271
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 13-268
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-269
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 121

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-272
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 14-271
Cow position:
Alignm length: 258
Alignm identity: 159
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 15-271
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 16-271
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 162

Conread position: 17-271
Cow position:
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 31-297
Cow position:
Alignm length: 268
Alignm identity: 190
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 222, 54

Conread position: 32-269
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 32-271
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 134, 0

Conread position: 36-271
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 196, 50

Conread position: 38-271
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 128, 0

Conread position: 39-271
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 127, 0

Conread position: 39-271
Cow position:
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 129

Conread position: 43-267
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 50-271
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 50-271
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 117

Conread position: 55-271
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 15, 7

Conread position: 61-271
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 105, 0

Conread position: 67-271
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 0

Conread position: 69-266
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 69-271
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 73-271
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 75-270
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 82-271
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 85

Conread position: 88-271
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 94-271
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 32

Conread position: 104-271
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 109-271
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 125-271
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.