Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-235
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 172, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 1-243
Cow position:
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-248
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 144, 0

Conread position: 1-259
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 166

Conread position: 1-265
Cow position:
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-265
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 169

Conread position: 1-267
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 1-268
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 166, 0

Conread position: 1-270
Cow position:
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 167

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 126

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 166

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 129, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 1-271
Cow position:
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 48

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 1-271
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 65, 138

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 65

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 166

Conread position: 1-271
Cow position:
Alignm length: 276
Alignm identity: 189
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 58, 176

Conread position: 1-272
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 113

Conread position: 1-272
Cow position:
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 33

Conread position: 1-272
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 52

Conread position: 1-284
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 190

Conread position: 1-284
Cow position:
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 167

Conread position: 1-287
Cow position:
Alignm length: 287
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 1-293
Cow position:
Alignm length: 293
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 2-241
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 131

Conread position: 2-263
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 147, 154

Conread position: 2-270
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 59

Conread position: 2-270
Cow position:
Alignm length: 269
Alignm identity: 199
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 23, 121

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 2-271
Cow position:
Alignm length: 275
Alignm identity: 182
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 6, 43

Conread position: 2-271
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 2-287
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 107, 71

Conread position: 5-241
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 163, 0

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 0

Conread position: 6-241
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 6-271
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 113

Conread position: 7-271
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 176, 36

Conread position: 7-271
Cow position:
Alignm length: 266
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 159

Conread position: 8-270
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 71

Conread position: 8-271
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 19

Conread position: 8-271
Cow position:
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 163

Conread position: 12-271
Cow position:
Alignm length: 260
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 154, 0

Conread position: 12-278
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 259, 38

Conread position: 13-241
Cow position:
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-260
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-269
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 158

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 13-271
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 154

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position:
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 14-257
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 14-271
Cow position:
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 15-271
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 161

Conread position: 17-271
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 26-271
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 140, 152

Conread position: 33-270
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 148, 13

Conread position: 38-271
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 194, 15

Conread position: 40-271
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 41-271
Cow position:
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 44-235
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 46-267
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 48-269
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 49-271
Cow position:
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 50-271
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 50-271
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 131, 45

Conread position: 52-271
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 115

Conread position: 58-271
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 204, 50

Conread position: 60-270
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 61-249
Cow position:
Alignm length: 189
Alignm identity: 151
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 105, 0

Conread position: 61-270
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 110, 0

Conread position: 69-301
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 222, 61

Conread position: 70-271
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 71-271
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 73-271
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 92, 0

Conread position: 85-271
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 89-237
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 110-271
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 139-267
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 48

Show alignments to all cow chromosomes.