Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-220
Cow position: chr3:56206121-56205901 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 1-236
Cow position: chr3:68663151-68662929 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-241
Cow position: chr3:35578370-35578147 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 1-249
Cow position: chr3:73211410-73211172 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 1-251
Cow position: chr3:23735690-23735933 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 117

Conread position: 1-253
Cow position: chr3:78200693-78200941 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 116

Conread position: 1-258
Cow position: chr3:40284767-40285016 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-261
Cow position: chr3:24872182-24871939 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 183, 0

Conread position: 1-261
Cow position: chr3:53934876-53934641 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 1-264
Cow position: chr3:52150532-52150786 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-266
Cow position: chr3:52652765-52653030 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 129

Conread position: 1-267
Cow position: chr3:42187050-42186792 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-267
Cow position: chr3:54863041-54863298 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 0

Conread position: 1-268
Cow position: chr3:3837026-3837283 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 1-268
Cow position: chr3:5887465-5887206 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position: chr3:21178675-21178934 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position: chr3:22234910-22235178 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 107

Conread position: 1-268
Cow position: chr3:22919101-22918845 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 166

Conread position: 1-268
Cow position: chr3:38096482-38096223 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position: chr3:64216152-64215893 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-269
Cow position: chr3:20519649-20519392 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-269
Cow position: chr3:30939083-30938820 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-269
Cow position: chr3:50461885-50461631 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 99

Conread position: 1-270
Cow position: chr3:2118034-2117766 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 97

Conread position: 1-270
Cow position: chr3:15379630-15379888 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-270
Cow position: chr3:19027872-19028131 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 52

Conread position: 1-270
Cow position: chr3:20379138-20379398 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-270
Cow position: chr3:23286770-23287016 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-270
Cow position: chr3:24432958-24432702 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-270
Cow position: chr3:24909367-24909108 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 157, 0

Conread position: 1-270
Cow position: chr3:26920309-26920040 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 174

Conread position: 1-270
Cow position: chr3:35077247-35077509 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 135, 45

Conread position: 1-270
Cow position: chr3:38346617-38346358 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 152

Conread position: 1-270
Cow position: chr3:41315693-41315421 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 164, 28

Conread position: 1-270
Cow position: chr3:43658304-43658568 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 18

Conread position: 1-270
Cow position: chr3:45700248-45699986 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 146

Conread position: 1-270
Cow position: chr3:49132839-49133083 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 1-270
Cow position: chr3:57481165-57481425 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-270
Cow position: chr3:58951039-58950781 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 0

Conread position: 1-270
Cow position: chr3:59118197-59118458 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position: chr3:59603382-59603122 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 1-270
Cow position: chr3:61539181-61538920 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:579754-579492 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:1034669-1034408 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 144

Conread position: 1-271
Cow position: chr3:2075362-2075100 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:2707293-2707554 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:2833957-2834219 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:2866073-2866335 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:4018093-4017821 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 52

Conread position: 1-271
Cow position: chr3:4039354-4039614 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 237, 76

Conread position: 1-271
Cow position: chr3:5475121-5474859 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:5988981-5989244 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 166

Conread position: 1-271
Cow position: chr3:6689395-6689148 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 245, 69

Conread position: 1-271
Cow position: chr3:6785895-6785636 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:7245527-7245786 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:7787718-7787997 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 125, 66

Conread position: 1-271
Cow position: chr3:9665371-9665633 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:11418128-11417866 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:12750478-12750217 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr3:13084960-13085221 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 168

Conread position: 1-271
Cow position: chr3:13248439-13248704 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 165

Conread position: 1-271
Cow position: chr3:13275696-13275958 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr3:14647966-14647706 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 147

Conread position: 1-271
Cow position: chr3:15571012-15570748 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 86, 167

Conread position: 1-271
Cow position: chr3:15655735-15655996 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 130, 168

Conread position: 1-271
Cow position: chr3:16005218-16005482 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 46

Conread position: 1-271
Cow position: chr3:16157097-16156842 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 5

Conread position: 1-271
Cow position: chr3:16226456-16226194 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:16333002-16332739 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 75

Conread position: 1-271
Cow position: chr3:17865010-17864749 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-271
Cow position: chr3:18184487-18184231 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 19

Conread position: 1-271
Cow position: chr3:18246004-18246263 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-271
Cow position: chr3:18352780-18353049 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 125, 153

Conread position: 1-271
Cow position: chr3:18460106-18460375 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 125

Conread position: 1-271
Cow position: chr3:19216479-19216220 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:19753154-19753415 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 1-271
Cow position: chr3:19797522-19797785 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 166

Conread position: 1-271
Cow position: chr3:19884039-19883778 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-271
Cow position: chr3:19959176-19958914 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr3:20476080-20475827 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 101, 0

Conread position: 1-271
Cow position: chr3:20780879-20781140 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:22220721-22220460 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-271
Cow position: chr3:23010933-23010675 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr3:23216750-23217015 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 167

Conread position: 1-271
Cow position: chr3:24265779-24265518 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-271
Cow position: chr3:24442525-24442783 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:24585646-24585911 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 167

Conread position: 1-271
Cow position: chr3:24887167-24886906 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 1-271
Cow position: chr3:26567356-26567096 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:26722238-26722492 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 1-271
Cow position: chr3:26993703-26993444 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 1-271
Cow position: chr3:27546854-27547118 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 168

Conread position: 1-271
Cow position: chr3:28435126-28435379 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-271
Cow position: chr3:29282335-29282079 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 107

Conread position: 1-271
Cow position: chr3:29391551-29391802 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 1-271
Cow position: chr3:30567695-30567433 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:30615362-30615621 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:30753164-30752903 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 1-271
Cow position: chr3:31022256-31021999 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 1-271
Cow position: chr3:31224867-31224595 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 151

Conread position: 1-271
Cow position: chr3:31419108-31418853 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 232, 91

Conread position: 1-271
Cow position: chr3:31422544-31422802 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 1-271
Cow position: chr3:31933757-31934018 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:32221290-32221031 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 1-271
Cow position: chr3:32619431-32619698 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 52

Conread position: 1-271
Cow position: chr3:33469084-33469346 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 96

Conread position: 1-271
Cow position: chr3:34392703-34392967 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:35884540-35884801 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 1-271
Cow position: chr3:36403702-36403432 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 55

Conread position: 1-271
Cow position: chr3:36861525-36861784 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:36874480-36874741 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-271
Cow position: chr3:37009164-37009423 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 165

Conread position: 1-271
Cow position: chr3:37600312-37600050 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 123

Conread position: 1-271
Cow position: chr3:38870147-38869886 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:39970486-39970749 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 165, 43

Conread position: 1-271
Cow position: chr3:40101274-40101539 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 105, 169

Conread position: 1-271
Cow position: chr3:41206984-41207246 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-271
Cow position: chr3:42846925-42846664 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:43528820-43529082 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 65

Conread position: 1-271
Cow position: chr3:44536394-44536652 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:45748836-45748574 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:45881312-45881057 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-271
Cow position: chr3:45978081-45977819 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:46506350-46506088 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 52

Conread position: 1-271
Cow position: chr3:46683415-46683153 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 1-271
Cow position: chr3:46753421-46753166 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 43

Conread position: 1-271
Cow position: chr3:47078031-47078293 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:47272297-47272559 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:47987021-47986759 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:48273366-48273098 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 185

Conread position: 1-271
Cow position: chr3:48528606-48528354 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-271
Cow position: chr3:48603842-48603581 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 1-271
Cow position: chr3:49336767-49336512 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 1-271
Cow position: chr3:49416269-49416527 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-271
Cow position: chr3:49564598-49564336 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:49732197-49732477 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 233

Conread position: 1-271
Cow position: chr3:49907453-49907713 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-271
Cow position: chr3:51234923-51235182 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 1-271
Cow position: chr3:52256938-52257206 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 26

Conread position: 1-271
Cow position: chr3:52651373-52651635 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 1-271
Cow position: chr3:54653578-54653855 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 165

Conread position: 1-271
Cow position: chr3:54788667-54788408 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 1-271
Cow position: chr3:56148874-56148615 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:56160245-56160506 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 56

Conread position: 1-271
Cow position: chr3:56297966-56297704 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:56302226-56302486 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-271
Cow position: chr3:56644749-56645011 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr3:56697419-56697157 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 1-271
Cow position: chr3:57456530-57456264 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 186

Conread position: 1-271
Cow position: chr3:58336888-58336626 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:61242960-61242702 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 77, 29

Conread position: 1-271
Cow position: chr3:61278327-61278067 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 1-271
Cow position: chr3:61678114-61677854 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 28

Conread position: 1-271
Cow position: chr3:63198887-63198633 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr3:63275949-63276206 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 100

Conread position: 1-271
Cow position: chr3:64294092-64293840 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-271
Cow position: chr3:64654248-64653988 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr3:65989488-65989229 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:67745197-67745452 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 52

Conread position: 1-271
Cow position: chr3:68501039-68500779 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:69930255-69930517 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:70891024-70890765 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 146

Conread position: 1-271
Cow position: chr3:70913681-70913948 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 167

Conread position: 1-271
Cow position: chr3:72633654-72633392 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:73450731-73450994 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 166

Conread position: 1-271
Cow position: chr3:73763055-73763312 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr3:74700234-74700499 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr3:75771553-75771815 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:76136901-76136641 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-271
Cow position: chr3:77366130-77366387 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 1-271
Cow position: chr3:78023866-78024116 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr3:80582430-80582176 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 230, 9

Conread position: 1-271
Cow position: chr3:81374670-81374932 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr3:82275088-82275349 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 135

Conread position: 1-271
Cow position: chr3:83699326-83699587 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 166, 0

Conread position: 1-272
Cow position: chr3:3031812-3031550 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 167

Conread position: 1-272
Cow position: chr3:5445246-5445509 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-272
Cow position: chr3:11944651-11944386 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 76

Conread position: 1-272
Cow position: chr3:54608431-54608691 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 165

Conread position: 1-272
Cow position: chr3:55461086-55461346 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 207, 95

Conread position: 1-273
Cow position: chr3:63219505-63219246 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 262, 32

Conread position: 1-285
Cow position: chr3:39065492-39065216 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 1-285
Cow position: chr3:58034087-58034363 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 38

Conread position: 1-287
Cow position: chr3:7678075-7677792 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 45

Conread position: 1-293
Cow position: chr3:59607865-59607591 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 6, 18

Conread position: 2-247
Cow position: chr3:49649793-49649561 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 2-260
Cow position: chr3:64376138-64376385 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 2-269
Cow position: chr3:65961462-65961202 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 6, 49

Conread position: 2-270
Cow position: chr3:6897406-6897147 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 2-270
Cow position: chr3:14453233-14452979 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 108, 0

Conread position: 2-270
Cow position: chr3:31120246-31120509 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-270
Cow position: chr3:76923727-76923974 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 174, 64

Conread position: 2-271
Cow position: chr3:1299667-1299397 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 166, 23

Conread position: 2-271
Cow position: chr3:3884614-3884866 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 2-271
Cow position: chr3:6442647-6442388 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 2-271
Cow position: chr3:10244240-10243979 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr3:13311417-13311684 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 168

Conread position: 2-271
Cow position: chr3:13352542-13352818 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 163

Conread position: 2-271
Cow position: chr3:19717691-19717949 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 160

Conread position: 2-271
Cow position: chr3:22353195-22352933 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 124

Conread position: 2-271
Cow position: chr3:22867394-22867649 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 2-271
Cow position: chr3:41057540-41057279 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr3:50921607-50921357 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 2-271
Cow position: chr3:57531714-57531452 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 167

Conread position: 2-271
Cow position: chr3:66623766-66623506 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 2-271
Cow position: chr3:84199350-84199088 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 2-272
Cow position: chr3:2507062-2507323 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 2-297
Cow position: chr3:28675399-28675106 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 55

Conread position: 5-267
Cow position: chr3:74391332-74391587 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 162

Conread position: 5-270
Cow position: chr3:77550533-77550289 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 5-271
Cow position: chr3:2851660-2851926 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 24

Conread position: 5-271
Cow position: chr3:4031325-4031062 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr3:21100381-21100123 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr3:33124681-33124935 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr3:37628460-37628205 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 5-271
Cow position: chr3:56336103-56336360 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 5-271
Cow position: chr3:66829371-66829626 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr3:75038264-75038522 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 6-270
Cow position: chr3:80564375-80564121 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 6-271
Cow position: chr3:34015988-34015731 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 7-246
Cow position: chr3:70894150-70893919 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 7-252
Cow position: chr3:74233646-74233415 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 118, 0

Conread position: 7-267
Cow position: chr3:36570857-36571112 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 95, 42

Conread position: 7-268
Cow position: chr3:24454968-24455211 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 7-270
Cow position: chr3:37982790-37983045 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 7-271
Cow position: chr3:25753838-25753572 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 159

Conread position: 7-271
Cow position: chr3:36238497-36238235 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 54

Conread position: 7-271
Cow position: chr3:54346832-54347089 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 115, 176

Conread position: 7-271
Cow position: chr3:59865055-59864799 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 7-271
Cow position: chr3:66978239-66977979 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 144, 163

Conread position: 7-271
Cow position: chr3:75997319-75997569 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 108, 0

Conread position: 8-268
Cow position: chr3:49541633-49541886 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 158

Conread position: 8-271
Cow position: chr3:4991335-4991584 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 8-271
Cow position: chr3:17937443-17937698 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 118

Conread position: 9-270
Cow position: chr3:16657301-16657554 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 112

Conread position: 10-269
Cow position: chr3:48095536-48095782 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 40

Conread position: 10-271
Cow position: chr3:49388222-49387968 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 10-271
Cow position: chr3:68401877-68402135 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 12

Conread position: 10-309
Cow position: chr3:29311713-29311422 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 259, 67

Conread position: 12-271
Cow position: chr3:35056535-35056296 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 13-257
Cow position: chr3:19691925-19692161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-259
Cow position: chr3:45097809-45097571 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-270
Cow position: chr3:30329100-30329348 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:302791-302541 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:1622670-1622420 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:2573097-2572847 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:2922200-2921950 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:6024289-6024539 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:6171041-6170791 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:6529562-6529312 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:7155237-7155487 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:8585846-8586097 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 69

Conread position: 13-271
Cow position: chr3:12797492-12797742 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 155, 79

Conread position: 13-271
Cow position: chr3:12932336-12932086 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:12982318-12982568 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:13034926-13035176 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:14212960-14212710 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:14680651-14680407 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 142, 0

Conread position: 13-271
Cow position: chr3:14923221-14922972 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 13-271
Cow position: chr3:15417036-15416786 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:19881619-19881369 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:20795863-20795613 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:21593851-21593602 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 13-271
Cow position: chr3:21779208-21779458 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:26742307-26742553 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 13-271
Cow position: chr3:26892060-26891810 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:28922565-28922315 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:34037538-34037288 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:35043729-35043479 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:35109796-35109546 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:35919129-35918879 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:36417309-36417059 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:37150837-37151087 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:37894399-37894151 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 13-271
Cow position: chr3:37972596-37972348 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 13-271
Cow position: chr3:38747950-38747700 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:39232281-39232031 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:40049458-40049208 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:40205972-40205723 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:40520370-40520620 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 13-271
Cow position: chr3:41018741-41018991 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:43525170-43525420 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 13-271
Cow position: chr3:45675208-45675458 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:45946956-45947206 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:50205144-50204884 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 52

Conread position: 13-271
Cow position: chr3:50217561-50217311 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:51256508-51256257 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 153

Conread position: 13-271
Cow position: chr3:51603207-51602957 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:52045450-52045700 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:52149716-52149966 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:53879696-53879947 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position: chr3:55246113-55245863 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:57835070-57835332 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 123, 112

Conread position: 13-271
Cow position: chr3:58027118-58027380 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 109, 165

Conread position: 13-271
Cow position: chr3:65085503-65085253 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:65178941-65178690 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position: chr3:65473997-65473749 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 154

Conread position: 13-271
Cow position: chr3:65536684-65536434 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:66968309-66968560 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position: chr3:69272171-69271921 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:70074534-70074784 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:76865001-76864751 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:78520618-78520367 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position: chr3:80741440-80741190 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:81057957-81058207 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr3:83767814-83767565 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 14-271
Cow position: chr3:3372617-3372865 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 14-271
Cow position: chr3:4135413-4135662 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 14-271
Cow position: chr3:6884714-6884464 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 152

Conread position: 14-271
Cow position: chr3:39921378-39921626 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 14-271
Cow position: chr3:42507645-42507894 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 15-270
Cow position: chr3:75479422-75479181 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 15-271
Cow position: chr3:3552879-3552636 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 15-271
Cow position: chr3:6838600-6838349 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 154

Conread position: 15-271
Cow position: chr3:16293348-16293597 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 31

Conread position: 15-271
Cow position: chr3:18863005-18862760 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 15-271
Cow position: chr3:34503571-34503816 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 15-271
Cow position: chr3:36121743-36121495 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 16-268
Cow position: chr3:55454487-55454740 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 81

Conread position: 16-270
Cow position: chr3:49120985-49121229 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 16-271
Cow position: chr3:2365350-2365587 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 16-271
Cow position: chr3:14633669-14633922 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 180, 65

Conread position: 16-271
Cow position: chr3:33254297-33254542 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 16-271
Cow position: chr3:40336579-40336826 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 16-271
Cow position: chr3:67284179-67283934 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 186, 61

Conread position: 17-271
Cow position: chr3:40003944-40004191 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 18-270
Cow position: chr3:19830603-19830837 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 58

Conread position: 20-271
Cow position: chr3:5951063-5951304 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 20-271
Cow position: chr3:11784922-11784679 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 20-271
Cow position: chr3:18815068-18814825 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 21-271
Cow position: chr3:6854041-6854283 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 127

Conread position: 22-271
Cow position: chr3:12676078-12676319 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 26-271
Cow position: chr3:51490852-51490619 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 27-271
Cow position: chr3:63688358-63688592 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 36

Conread position: 27-271
Cow position: chr3:67466320-67466562 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 166, 39

Conread position: 29-271
Cow position: chr3:14613581-14613347 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 29-271
Cow position: chr3:78664782-78665010 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 232, 73

Conread position: 32-287
Cow position: chr3:43045450-43045204 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 16

Conread position: 34-270
Cow position: chr3:62157149-62156918 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 35-271
Cow position: chr3:16868859-16869086 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 37-229
Cow position: chr3:46135537-46135730 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 131

Conread position: 37-271
Cow position: chr3:16620208-16620436 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 130

Conread position: 38-271
Cow position: chr3:72174761-72174986 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 39-267
Cow position: chr3:578470-578244 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 39-271
Cow position: chr3:54959276-54959052 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 39-271
Cow position: chr3:73416542-73416318 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 18

Conread position: 41-269
Cow position: chr3:14724647-14724436 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 43-271
Cow position: chr3:19824530-19824748 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 24

Conread position: 44-271
Cow position: chr3:822551-822770 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 122, 0

Conread position: 44-271
Cow position: chr3:36671079-36671298 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 122, 0

Conread position: 45-270
Cow position: chr3:55374617-55374396 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 0

Conread position: 45-271
Cow position: chr3:40069804-40070030 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 8

Conread position: 47-271
Cow position: chr3:2903921-2904138 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 6, 0

Conread position: 47-297
Cow position: chr3:10371901-10371665 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 228, 29

Conread position: 49-269
Cow position: chr3:69951236-69951027 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 49-271
Cow position: chr3:23012736-23012524 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 50-266
Cow position: chr3:21005391-21005182 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 117

Conread position: 50-270
Cow position: chr3:80277368-80277579 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 118

Conread position: 52-271
Cow position: chr3:35620092-35619872 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 108

Conread position: 54-271
Cow position: chr3:72669032-72669240 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 55-271
Cow position: chr3:29130616-29130412 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 55-271
Cow position: chr3:42423975-42424181 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 58-271
Cow position: chr3:13723187-13723392 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 58-271
Cow position: chr3:49999660-49999455 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 95, 7

Conread position: 58-271
Cow position: chr3:64278261-64278053 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 59-270
Cow position: chr3:72603737-72603536 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 60-271
Cow position: chr3:597621-597427 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 63-271
Cow position: chr3:17460736-17460536 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 90

Conread position: 68-271
Cow position: chr3:34027249-34027443 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 69-249
Cow position: chr3:78261635-78261807 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 97, 0

Conread position: 69-268
Cow position: chr3:7476408-7476597 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 69-270
Cow position: chr3:6874558-6874756 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 101

Conread position: 69-271
Cow position: chr3:3652793-3652982 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 69-271
Cow position: chr3:20999558-20999752 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr3:31050511-31050703 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 69-271
Cow position: chr3:40826910-40826716 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr3:55187935-55187739 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 116

Conread position: 69-271
Cow position: chr3:57743023-57742832 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 69-271
Cow position: chr3:81101592-81101398 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 70-271
Cow position: chr3:18886970-18886777 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 96, 0

Conread position: 71-271
Cow position: chr3:56103248-56103059 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 72-269
Cow position: chr3:11334353-11334543 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 112, 0

Conread position: 72-269
Cow position: chr3:11446953-11446755 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 116, 0

Conread position: 72-271
Cow position: chr3:15988447-15988259 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 72-271
Cow position: chr3:20074598-20074407 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 74-271
Cow position: chr3:73765140-73765329 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 84, 51

Conread position: 75-271
Cow position: chr3:47340629-47340817 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 0

Conread position: 80-271
Cow position: chr3:12785061-12785244 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 80-271
Cow position: chr3:30351778-30351595 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 80-271
Cow position: chr3:60891766-60891584 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 102-271
Cow position: chr3:50347303-50347127 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 104-270
Cow position: chr3:18253021-18252863 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 109-250
Cow position: chr3:69945782-69945649 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 109-271
Cow position: chr3:12665611-12665457 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 113-270
Cow position: chr3:6882157-6881999 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 105

Conread position: 113-271
Cow position: chr3:61173960-61173811 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 113-271
Cow position: chr3:71246072-71245915 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 71, 5

Conread position: 117-268
Cow position: chr3:46349699-46349547 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 118-267
Cow position: chr3:64876237-64876096 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 118-271
Cow position: chr3:46857819-46857964 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 120-271
Cow position: chr3:49931298-49931155 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 125-271
Cow position: chr3:46900182-46900047 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 125-271
Cow position: chr3:68043047-68043186 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 131-271
Cow position: chr3:73637331-73637199 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 131-298
Cow position: chr3:53387668-53387825 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 154, 35

Conread position: 154-271
Cow position: chr3:8605484-8605594 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.