Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-228
Cow position: chr4:54931242-54931463 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 1-232
Cow position: chr4:21065445-21065220 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 184

Conread position: 1-232
Cow position: chr4:28835949-28835707 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 141, 0

Conread position: 1-237
Cow position: chr4:34210564-34210335 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 104, 110

Conread position: 1-241
Cow position: chr4:62161942-62161710 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 165

Conread position: 1-243
Cow position: chr4:4673035-4673285 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 101, 80

Conread position: 1-249
Cow position: chr4:28173485-28173724 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 83, 63

Conread position: 1-254
Cow position: chr4:1365808-1366053 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-257
Cow position: chr4:65539152-65539396 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-266
Cow position: chr4:14142703-14142455 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 1-267
Cow position: chr4:23150272-23150530 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 115

Conread position: 1-268
Cow position: chr4:2601586-2601333 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-268
Cow position: chr4:27462796-27462518 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 179, 0

Conread position: 1-268
Cow position: chr4:31635123-31635378 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 155, 0

Conread position: 1-268
Cow position: chr4:54190151-54189891 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 165

Conread position: 1-268
Cow position: chr4:58833784-58834046 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 18

Conread position: 1-269
Cow position: chr4:17067726-17067986 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position: chr4:489063-489316 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 1-270
Cow position: chr4:1935132-1935398 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 126

Conread position: 1-270
Cow position: chr4:11872480-11872724 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 1-270
Cow position: chr4:20790174-20789912 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 158, 0

Conread position: 1-270
Cow position: chr4:22743772-22743511 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 166

Conread position: 1-270
Cow position: chr4:38584264-38584006 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position: chr4:41097354-41097097 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position: chr4:44901651-44901380 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 166

Conread position: 1-270
Cow position: chr4:45239739-45239477 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr4:1007279-1007017 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:1927248-1927510 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:2190911-2191169 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:3129242-3128980 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:3252166-3252427 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-271
Cow position: chr4:3283977-3284233 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-271
Cow position: chr4:3450185-3449927 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 1-271
Cow position: chr4:3475057-3474796 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:3800902-3801164 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:3849982-3849723 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 73

Conread position: 1-271
Cow position: chr4:3893157-3892893 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 1-271
Cow position: chr4:5284452-5284716 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 185

Conread position: 1-271
Cow position: chr4:5441274-5441536 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:5610627-5610886 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-271
Cow position: chr4:6547302-6547564 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:8377753-8378015 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:8441859-8442125 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 140

Conread position: 1-271
Cow position: chr4:8674115-8673847 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 154

Conread position: 1-271
Cow position: chr4:8678188-8677926 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr4:10044382-10044642 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:10885024-10884763 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 1-271
Cow position: chr4:11107704-11107959 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 77

Conread position: 1-271
Cow position: chr4:11201249-11200993 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 140, 66

Conread position: 1-271
Cow position: chr4:11918567-11918827 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-271
Cow position: chr4:12605499-12605755 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-271
Cow position: chr4:13979430-13979167 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 1-271
Cow position: chr4:14919444-14919161 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 24

Conread position: 1-271
Cow position: chr4:15119382-15119110 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 138

Conread position: 1-271
Cow position: chr4:16642201-16641943 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-271
Cow position: chr4:16735697-16735437 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-271
Cow position: chr4:16832167-16832425 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 72, 0

Conread position: 1-271
Cow position: chr4:16859334-16859594 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:17833462-17833721 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 1-271
Cow position: chr4:17877345-17877082 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 165

Conread position: 1-271
Cow position: chr4:18331473-18331211 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:18845177-18844923 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr4:18973879-18973619 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:19237453-19237192 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-271
Cow position: chr4:19744363-19744098 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 84

Conread position: 1-271
Cow position: chr4:20585975-20586232 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 43

Conread position: 1-271
Cow position: chr4:20616331-20616593 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:21364629-21364373 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 26

Conread position: 1-271
Cow position: chr4:22014037-22014297 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-271
Cow position: chr4:22317126-22316849 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 1-271
Cow position: chr4:22850292-22850550 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 167

Conread position: 1-271
Cow position: chr4:23553082-23552817 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 161

Conread position: 1-271
Cow position: chr4:25226360-25226096 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 92

Conread position: 1-271
Cow position: chr4:26745893-26745640 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr4:26874521-26874783 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 1-271
Cow position: chr4:27287720-27287982 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 1-271
Cow position: chr4:29530072-29530332 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 1-271
Cow position: chr4:32249878-32249619 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr4:32839112-32839376 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 168, 87

Conread position: 1-271
Cow position: chr4:33020246-33020507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-271
Cow position: chr4:33496946-33496684 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:33613211-33613491 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 139

Conread position: 1-271
Cow position: chr4:34713203-34712942 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:35261000-35261262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:36025884-36026146 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:36899763-36899502 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:37786688-37786426 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 168

Conread position: 1-271
Cow position: chr4:39421982-39421720 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:39458056-39457794 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:40218225-40217963 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:41962283-41962021 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:42330344-42330607 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:42922800-42923058 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 67

Conread position: 1-271
Cow position: chr4:43316269-43316524 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-271
Cow position: chr4:43884480-43884218 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:43896110-43896372 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:44734003-44733744 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 1-271
Cow position: chr4:45235411-45235672 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-271
Cow position: chr4:45764601-45764864 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 1-271
Cow position: chr4:46152049-46152311 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr4:46711219-46711479 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 1-271
Cow position: chr4:48030242-48029983 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-271
Cow position: chr4:48497065-48496802 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 183, 0

Conread position: 1-271
Cow position: chr4:49745058-49744796 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:52086539-52086281 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 175, 26

Conread position: 1-271
Cow position: chr4:54170808-54170550 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-271
Cow position: chr4:54757877-54758130 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-271
Cow position: chr4:57988130-57987868 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:58485084-58485340 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:59889177-59889450 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 151

Conread position: 1-271
Cow position: chr4:60224491-60224750 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr4:61242655-61242404 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 1-271
Cow position: chr4:61651169-61651431 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-271
Cow position: chr4:61817017-61817279 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr4:62570078-62569809 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 158

Conread position: 1-271
Cow position: chr4:67600292-67600550 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 1-271
Cow position: chr4:67652049-67652307 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 1-272
Cow position: chr4:9292188-9291920 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 1-286
Cow position: chr4:27997154-27996882 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-287
Cow position: chr4:30508586-30508304 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 75

Conread position: 1-288
Cow position: chr4:19006879-19006599 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 165

Conread position: 1-299
Cow position: chr4:50193922-50193627 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 94

Conread position: 2-270
Cow position: chr4:1352613-1352865 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 32

Conread position: 2-270
Cow position: chr4:7806554-7806294 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 2-270
Cow position: chr4:49740916-49740656 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 5

Conread position: 2-271
Cow position: chr4:8558929-8559191 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 146, 38

Conread position: 2-271
Cow position: chr4:18099556-18099822 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 168

Conread position: 2-271
Cow position: chr4:19141403-19141127 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 18

Conread position: 2-271
Cow position: chr4:33069456-33069715 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 2-271
Cow position: chr4:44046909-44046644 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 6, 47

Conread position: 2-271
Cow position: chr4:48503227-48502967 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 2-271
Cow position: chr4:54695647-54695907 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 2-271
Cow position: chr4:60838573-60838303 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 185

Conread position: 2-271
Cow position: chr4:67767805-67767544 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-272
Cow position: chr4:47269555-47269289 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 166

Conread position: 2-273
Cow position: chr4:4085991-4086249 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 25

Conread position: 5-246
Cow position: chr4:51014454-51014226 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 141, 78

Conread position: 5-257
Cow position: chr4:41189126-41189369 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-267
Cow position: chr4:52696626-52696378 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 5-271
Cow position: chr4:359265-359007 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr4:9821520-9821254 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 93

Conread position: 5-271
Cow position: chr4:19957410-19957152 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr4:25596103-25596360 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr4:33399088-33399348 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 240, 145

Conread position: 5-271
Cow position: chr4:56226320-56226068 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 5-271
Cow position: chr4:58688520-58688774 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 5-279
Cow position: chr4:10871958-10872227 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 180, 0

Conread position: 6-271
Cow position: chr4:43476410-43476666 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 6-271
Cow position: chr4:57573653-57573400 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 7-246
Cow position: chr4:24002543-24002766 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 7-270
Cow position: chr4:20091492-20091226 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 140

Conread position: 7-270
Cow position: chr4:42480609-42480361 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 7-270
Cow position: chr4:61399976-61400227 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 142

Conread position: 7-271
Cow position: chr4:4379755-4379498 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 160

Conread position: 7-271
Cow position: chr4:14543055-14543308 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 7-271
Cow position: chr4:27540044-27539787 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 7-271
Cow position: chr4:43840599-43840856 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 160

Conread position: 8-271
Cow position: chr4:5914701-5914452 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 42

Conread position: 9-269
Cow position: chr4:37703691-37703443 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 20

Conread position: 9-271
Cow position: chr4:68880896-68880642 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 10-271
Cow position: chr4:8760668-8760405 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 83, 63

Conread position: 10-272
Cow position: chr4:54494261-54494009 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 13-249
Cow position: chr4:18738369-18738597 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-270
Cow position: chr4:6231733-6231484 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-270
Cow position: chr4:18335572-18335825 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 157

Conread position: 13-270
Cow position: chr4:19585881-19586130 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:162455-162205 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:533665-533415 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:606980-606730 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:652402-652152 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:2226390-2226639 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 13-271
Cow position: chr4:4850716-4850466 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:4923897-4924147 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 13-271
Cow position: chr4:5882850-5882600 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:6265857-6266091 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 13-271
Cow position: chr4:7138991-7139241 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:9041321-9041071 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:9357613-9357363 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:10122780-10122531 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 13-271
Cow position: chr4:10403340-10403590 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:10424852-10424617 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 13-271
Cow position: chr4:14164161-14163911 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:14684586-14684336 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:15056178-15055928 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:15618069-15617819 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:15802464-15802714 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:17033126-17033376 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:17235394-17235146 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:17821905-17821655 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:20656690-20656937 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 13-271
Cow position: chr4:21044789-21045036 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 13-271
Cow position: chr4:21342448-21342198 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:24179103-24179353 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:26131533-26131283 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:27655462-27655212 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:29560154-29560404 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:30474755-30474504 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 154

Conread position: 13-271
Cow position: chr4:33146232-33145982 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:33171531-33171281 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:35144170-35144420 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:44777816-44778067 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 146

Conread position: 13-271
Cow position: chr4:45114016-45114266 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:46585532-46585782 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:53316662-53316912 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:54161692-54161938 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 13-271
Cow position: chr4:60579755-60580005 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:60856135-60855885 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:62120382-62120131 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 13-271
Cow position: chr4:62453613-62453863 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 13-271
Cow position: chr4:62961988-62962235 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 13-271
Cow position: chr4:63195208-63195455 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 13-271
Cow position: chr4:64156103-64155853 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr4:65198426-65198676 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-276
Cow position: chr4:29833997-29833742 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 153

Conread position: 13-340
Cow position: chr4:28855485-28855168 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 14-271
Cow position: chr4:19790496-19790249 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 14-271
Cow position: chr4:38834740-38834989 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 15-271
Cow position: chr4:30573331-30573083 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 15-271
Cow position: chr4:47116209-47115961 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 15-271
Cow position: chr4:47264150-47263902 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 16-250
Cow position: chr4:9519595-9519369 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 0

Conread position: 16-267
Cow position: chr4:36892050-36891809 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 16-270
Cow position: chr4:6167599-6167847 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 55

Conread position: 16-270
Cow position: chr4:64874657-64874901 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 129

Conread position: 16-271
Cow position: chr4:49885919-49886167 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 139

Conread position: 16-271
Cow position: chr4:66173953-66174196 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 23-274
Cow position: chr4:9375724-9375966 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 143, 0

Conread position: 24-271
Cow position: chr4:65464675-65464911 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 26-271
Cow position: chr4:68796066-68795829 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 111, 139

Conread position: 29-270
Cow position: chr4:54501923-54502166 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 116

Conread position: 31-257
Cow position: chr4:1462051-1462275 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 135

Conread position: 34-271
Cow position: chr4:35868551-35868319 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 147, 133

Conread position: 36-271
Cow position: chr4:20630764-20630540 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 13

Conread position: 39-271
Cow position: chr4:1368725-1368941 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 34

Conread position: 39-271
Cow position: chr4:23508545-23508324 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 189, 127

Conread position: 39-271
Cow position: chr4:38564345-38564569 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 127, 0

Conread position: 39-272
Cow position: chr4:50978098-50977880 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 40-268
Cow position: chr4:45918225-45918006 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 40-271
Cow position: chr4:2140405-2140183 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 41-270
Cow position: chr4:65842533-65842772 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 41-271
Cow position: chr4:65581852-65581644 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 48-271
Cow position: chr4:66020733-66020519 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 49-271
Cow position: chr4:31868623-31868409 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 117, 0

Conread position: 50-272
Cow position: chr4:28613216-28613009 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 55-271
Cow position: chr4:3961566-3961771 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 57-271
Cow position: chr4:7779730-7779525 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 60-270
Cow position: chr4:65415855-65416055 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 60-271
Cow position: chr4:18005042-18004839 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 106, 0

Conread position: 62-271
Cow position: chr4:62906696-62906897 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 65-271
Cow position: chr4:47949016-47949214 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 101, 0

Conread position: 66-271
Cow position: chr4:18812888-18813085 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 69-269
Cow position: chr4:38707760-38707948 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 69-271
Cow position: chr4:16363519-16363325 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 99, 0

Conread position: 69-271
Cow position: chr4:20243475-20243281 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 69-271
Cow position: chr4:53544780-53544590 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 61

Conread position: 69-271
Cow position: chr4:55509524-55509730 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr4:68386844-68386648 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 69-272
Cow position: chr4:61449835-61449637 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 70-271
Cow position: chr4:26468541-26468352 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 70-298
Cow position: chr4:10838027-10838247 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 35

Conread position: 72-232
Cow position: chr4:8890858-8891018 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 102

Conread position: 74-271
Cow position: chr4:44593089-44593277 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 80-270
Cow position: chr4:61272283-61272464 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 73

Conread position: 80-271
Cow position: chr4:3170588-3170405 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 80-271
Cow position: chr4:11025910-11026098 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 93

Conread position: 84-271
Cow position: chr4:12751679-12751489 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 82

Conread position: 85-268
Cow position: chr4:20607050-20606866 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 109, 55

Conread position: 88-271
Cow position: chr4:19049561-19049386 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 90-271
Cow position: chr4:6487070-6487243 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 91-271
Cow position: chr4:6034730-6034902 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 92-271
Cow position: chr4:13500686-13500857 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 92-271
Cow position: chr4:21258964-21258787 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 76

Conread position: 93-271
Cow position: chr4:23451731-23451895 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 94-271
Cow position: chr4:21297491-21297655 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 97-271
Cow position: chr4:16605871-16606050 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 83, 70

Conread position: 99-271
Cow position: chr4:34700270-34700432 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 110-271
Cow position: chr4:7048793-7048945 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 112-269
Cow position: chr4:10192-10342 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 73

Conread position: 118-271
Cow position: chr4:59452248-59452393 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 119-271
Cow position: chr4:17919515-17919658 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 120-271
Cow position: chr4:9445539-9445682 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 130-271
Cow position: chr4:65431538-65431395 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 36

Show alignments to all cow chromosomes.