Cow genome map

Conread name: Spl1-SPL01A020032

Conread position: 1-236
Cow position: chr6:8210105-8210332 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 1-241
Cow position: chr6:3118763-3119003 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 77, 188

Conread position: 1-244
Cow position: chr6:1274231-1274463 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-248
Cow position: chr6:6182101-6182338 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 1-248
Cow position: chr6:16737499-16737261 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 1-249
Cow position: chr6:41192972-41192733 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-250
Cow position: chr6:10044832-10044591 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-256
Cow position: chr6:32211146-32211388 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 1-257
Cow position: chr6:7253943-7254186 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 1-258
Cow position: chr6:42267342-42267102 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-263
Cow position: chr6:34405953-34405698 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 165

Conread position: 1-266
Cow position: chr6:22225374-22225614 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 1-266
Cow position: chr6:51718182-51717926 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 1-267
Cow position: chr6:11869309-11869568 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 1-268
Cow position: chr6:223872-224140 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 166

Conread position: 1-268
Cow position: chr6:1887173-1887425 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 52

Conread position: 1-268
Cow position: chr6:6100525-6100785 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-268
Cow position: chr6:9839503-9839769 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 80

Conread position: 1-268
Cow position: chr6:19145464-19145723 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 1-268
Cow position: chr6:21832036-21832293 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 124, 0

Conread position: 1-268
Cow position: chr6:45617953-45618217 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 116

Conread position: 1-268
Cow position: chr6:54357905-54358157 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 1-269
Cow position: chr6:3445188-3445447 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 1-269
Cow position: chr6:53672968-53672699 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 170

Conread position: 1-270
Cow position: chr6:1263785-1263521 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 102

Conread position: 1-270
Cow position: chr6:12352465-12352201 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 1-270
Cow position: chr6:46283479-46283734 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-270
Cow position: chr6:47540000-47539744 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-270
Cow position: chr6:49733411-49733150 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-270
Cow position: chr6:55170096-55169838 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 76

Conread position: 1-271
Cow position: chr6:181916-182188 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 176

Conread position: 1-271
Cow position: chr6:366692-366415 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:706621-706362 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-271
Cow position: chr6:2186156-2186418 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:3271855-3272118 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 166

Conread position: 1-271
Cow position: chr6:3484794-3485055 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-271
Cow position: chr6:3885882-3886141 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 1-271
Cow position: chr6:4389338-4389077 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:5946149-5946411 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:6160207-6159960 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1-271
Cow position: chr6:6471293-6471572 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 1-271
Cow position: chr6:7216411-7216159 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-271
Cow position: chr6:7467025-7467287 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:8205813-8205551 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:8753832-8754091 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-271
Cow position: chr6:9322618-9322365 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 1-271
Cow position: chr6:10695340-10695085 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position: chr6:11192954-11193218 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 166

Conread position: 1-271
Cow position: chr6:11288842-11289103 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 45

Conread position: 1-271
Cow position: chr6:11721590-11721844 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr6:14950031-14950291 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 169

Conread position: 1-271
Cow position: chr6:15275614-15275876 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:15471188-15471449 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 94, 66

Conread position: 1-271
Cow position: chr6:15783363-15783628 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 146, 0

Conread position: 1-271
Cow position: chr6:16410680-16410419 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr6:16593574-16593312 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:17111540-17111802 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:17122015-17121753 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:18462927-18463185 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 82

Conread position: 1-271
Cow position: chr6:19059899-19059640 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 1-271
Cow position: chr6:20451584-20451323 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 1-271
Cow position: chr6:20552615-20552879 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 147

Conread position: 1-271
Cow position: chr6:22737080-22737342 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:24125780-24126040 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 74

Conread position: 1-271
Cow position: chr6:24242912-24242651 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 1-271
Cow position: chr6:24988667-24988405 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 1-271
Cow position: chr6:27365792-27365535 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 1-271
Cow position: chr6:27859082-27858822 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 109

Conread position: 1-271
Cow position: chr6:28000770-28001032 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:28112212-28112474 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr6:28161035-28160773 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:28401271-28401009 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:29484600-29484341 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:30316304-30316581 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 144, 129

Conread position: 1-271
Cow position: chr6:32125574-32125309 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 1-271
Cow position: chr6:33301295-33301032 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 167

Conread position: 1-271
Cow position: chr6:33921775-33922034 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr6:33949538-33949796 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 152, 0

Conread position: 1-271
Cow position: chr6:34075496-34075236 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 166

Conread position: 1-271
Cow position: chr6:35873109-35873368 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 125

Conread position: 1-271
Cow position: chr6:36531901-36531638 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 1-271
Cow position: chr6:37388192-37387930 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:38872902-38873164 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:38988198-38988461 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 219, 166

Conread position: 1-271
Cow position: chr6:39137117-39136862 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr6:39912948-39912686 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:40139669-40139921 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-271
Cow position: chr6:41410227-41409965 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:42481507-42481245 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:43789742-43790004 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:44017202-44017464 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:45666311-45666566 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 1-271
Cow position: chr6:46763780-46764042 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:47381296-47381047 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 1-271
Cow position: chr6:47574411-47574154 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 1-271
Cow position: chr6:47977557-47977297 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-271
Cow position: chr6:48567866-48568127 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 1-271
Cow position: chr6:50120307-50120566 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 1-271
Cow position: chr6:50571817-50571555 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:51150568-51150306 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-271
Cow position: chr6:51733707-51733445 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:51877381-51877117 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 165

Conread position: 1-271
Cow position: chr6:53461545-53461815 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 132

Conread position: 1-271
Cow position: chr6:53739917-53739652 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 35

Conread position: 1-271
Cow position: chr6:54429313-54429047 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 1-271
Cow position: chr6:55239316-55239054 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:55903715-55903453 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 166

Conread position: 1-271
Cow position: chr6:56377306-56377568 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 40

Conread position: 1-271
Cow position: chr6:56858885-56858618 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 1-271
Cow position: chr6:57308850-57308588 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 113

Conread position: 1-271
Cow position: chr6:58036909-58036645 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:59596881-59596609 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 168

Conread position: 1-271
Cow position: chr6:60456303-60456030 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 144

Conread position: 1-271
Cow position: chr6:60876921-60876660 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-271
Cow position: chr6:63040707-63040969 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-271
Cow position: chr6:65921129-65921409 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 166

Conread position: 1-271
Cow position: chr6:65930847-65930590 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 116

Conread position: 1-271
Cow position: chr6:67187172-67186905 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 39

Conread position: 1-272
Cow position: chr6:479172-478913 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 2-227
Cow position: chr6:7175647-7175874 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 194, 55

Conread position: 2-265
Cow position: chr6:52246121-52245871 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 2-267
Cow position: chr6:28476643-28476387 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 164, 0

Conread position: 2-270
Cow position: chr6:16625416-16625145 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 164

Conread position: 2-270
Cow position: chr6:56842647-56842387 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-271
Cow position: chr6:227779-227521 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 2-271
Cow position: chr6:1817389-1817645 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 2-271
Cow position: chr6:1834620-1834359 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:3928759-3928498 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:6200954-6200695 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:8535174-8535434 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 2-271
Cow position: chr6:9733354-9733626 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 56

Conread position: 2-271
Cow position: chr6:15137548-15137809 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:16645501-16645248 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 2-271
Cow position: chr6:29085869-29085606 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 164

Conread position: 2-271
Cow position: chr6:31912552-31912811 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 2-271
Cow position: chr6:33466582-33466321 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:39330907-39331169 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 104

Conread position: 2-271
Cow position: chr6:40550076-40550336 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 113

Conread position: 2-271
Cow position: chr6:40813986-40813725 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:42420743-42420480 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 2-271
Cow position: chr6:46225340-46225598 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 2-271
Cow position: chr6:55538649-55538907 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 2-284
Cow position: chr6:46570603-46570326 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 3-271
Cow position: chr6:54491316-54491573 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 5-266
Cow position: chr6:11169193-11168944 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 19

Conread position: 5-268
Cow position: chr6:1637335-1637590 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-270
Cow position: chr6:43797276-43797533 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 5-271
Cow position: chr6:2582236-2581967 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 116

Conread position: 5-271
Cow position: chr6:9469148-9468892 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 9

Conread position: 5-271
Cow position: chr6:17049996-17049737 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 41

Conread position: 5-271
Cow position: chr6:34494294-34494039 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr6:34503902-34504157 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr6:47039589-47039847 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 5-271
Cow position: chr6:53542861-53543119 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 6-271
Cow position: chr6:28156652-28156906 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 6-271
Cow position: chr6:51674389-51674130 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 162

Conread position: 7-269
Cow position: chr6:24965910-24966165 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 160, 0

Conread position: 7-271
Cow position: chr6:2607077-2606828 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 110

Conread position: 7-271
Cow position: chr6:10266513-10266763 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 96, 0

Conread position: 8-271
Cow position: chr6:34030875-34030619 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 8-271
Cow position: chr6:53811187-53810945 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 70

Conread position: 8-287
Cow position: chr6:14199662-14199390 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 75

Conread position: 9-256
Cow position: chr6:63197701-63197940 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 165, 0

Conread position: 9-270
Cow position: chr6:44510714-44510451 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 103, 119

Conread position: 10-264
Cow position: chr6:11466450-11466699 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 163, 67

Conread position: 10-270
Cow position: chr6:8145408-8145662 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 170, 0

Conread position: 11-271
Cow position: chr6:16699749-16699501 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 13-235
Cow position: chr6:44598437-44598651 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-259
Cow position: chr6:30704989-30704751 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-269
Cow position: chr6:19103294-19103542 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:126521-126771 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:451650-451899 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 13-271
Cow position: chr6:889169-888921 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 13-271
Cow position: chr6:1797239-1796989 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:2875422-2875670 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 13-271
Cow position: chr6:3152826-3152579 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 13-271
Cow position: chr6:3987442-3987692 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:7137728-7137978 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:7449109-7448859 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:9235126-9234875 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 13-271
Cow position: chr6:10536365-10536615 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:11020272-11020022 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:11389000-11389250 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:11401934-11401684 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:12972010-12971760 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:12998030-12997783 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 13-271
Cow position: chr6:13307784-13308034 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:16049682-16049929 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 13-271
Cow position: chr6:17387137-17386887 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:18803445-18803695 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:18912121-18912370 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:19712631-19712881 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:20215782-20216032 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:20581165-20581412 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 13-271
Cow position: chr6:21163917-21163667 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:21712320-21712070 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:22043396-22043645 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 101, 84

Conread position: 13-271
Cow position: chr6:23567994-23568229 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 13-271
Cow position: chr6:25374494-25374744 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:26324586-26324836 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:26830141-26829891 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:27093973-27094223 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:28065603-28065354 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 13-271
Cow position: chr6:28487047-28487297 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:33808820-33809070 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:34017110-34017358 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 13-271
Cow position: chr6:37217253-37217003 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:38917426-38917676 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:39080531-39080281 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:39897449-39897699 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:41158707-41158957 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:41495224-41495473 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 13-271
Cow position: chr6:41823223-41823473 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:42897804-42897551 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 173

Conread position: 13-271
Cow position: chr6:43049626-43049376 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:44146337-44146584 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 13-271
Cow position: chr6:45479474-45479724 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:45723511-45723761 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:45901379-45901628 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:45937893-45937643 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:45976113-45975863 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:53537690-53537440 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:54140000-54140249 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 69

Conread position: 13-271
Cow position: chr6:54900703-54900453 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:54978915-54979165 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:55361181-55361431 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:56556998-56557248 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:57329892-57329642 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:57521789-57521539 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:60379777-60379527 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:62665389-62665139 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:63177657-63177407 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:63714662-63714912 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 13-271
Cow position: chr6:67553846-67553596 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 14-271
Cow position: chr6:444315-444564 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 14-271
Cow position: chr6:19719180-19718932 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 15-271
Cow position: chr6:1245309-1245557 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 15-271
Cow position: chr6:14929059-14928815 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 0

Conread position: 15-271
Cow position: chr6:57857382-57857134 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 151, 0

Conread position: 16-271
Cow position: chr6:10681594-10681348 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 16-271
Cow position: chr6:27173452-27173205 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 16-271
Cow position: chr6:29689465-29689222 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 23, 55

Conread position: 16-271
Cow position: chr6:50527122-50526873 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 117, 162

Conread position: 17-271
Cow position: chr6:42761065-42761311 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 18-271
Cow position: chr6:2545799-2545557 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 18-271
Cow position: chr6:17344808-17344563 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 18-271
Cow position: chr6:43393503-43393265 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 19-268
Cow position: chr6:38439203-38438977 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 23-267
Cow position: chr6:2089873-2089643 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 0

Conread position: 26-271
Cow position: chr6:42988196-42988441 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 51

Conread position: 27-272
Cow position: chr6:3982502-3982262 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 139, 0

Conread position: 32-268
Cow position: chr6:7175065-7175284 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 32-271
Cow position: chr6:3016703-3016476 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 32-271
Cow position: chr6:51385834-51385598 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 135, 0

Conread position: 33-271
Cow position: chr6:47988521-47988289 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 33-271
Cow position: chr6:62961491-62961262 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 64

Conread position: 34-271
Cow position: chr6:65943484-65943255 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 37-270
Cow position: chr6:52697181-52696949 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 131

Conread position: 37-271
Cow position: chr6:45065574-45065795 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 115, 0

Conread position: 40-268
Cow position: chr6:58914751-58914968 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 65, 34

Conread position: 44-271
Cow position: chr6:44872209-44871989 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 124

Conread position: 46-249
Cow position: chr6:49579687-49579492 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 46-271
Cow position: chr6:8382520-8382303 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 0

Conread position: 60-271
Cow position: chr6:39998893-39999095 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 95, 0

Conread position: 60-271
Cow position: chr6:41232049-41231851 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 61-271
Cow position: chr6:48872761-48872960 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 63-243
Cow position: chr6:65870589-65870413 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 63-271
Cow position: chr6:49442508-49442307 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 105

Conread position: 64-271
Cow position: chr6:43779253-43779056 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 69-271
Cow position: chr6:1537252-1537069 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 69-271
Cow position: chr6:6601352-6601545 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 69-271
Cow position: chr6:11638650-11638842 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 69-271
Cow position: chr6:28102314-28102506 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 98

Conread position: 69-271
Cow position: chr6:39997527-39997721 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr6:40863478-40863668 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 69-271
Cow position: chr6:55041613-55041804 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr6:56441917-56442113 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 98

Conread position: 69-271
Cow position: chr6:56926291-56926097 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr6:60332903-60332708 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr6:64719873-64719680 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 69-271
Cow position: chr6:65819024-65819218 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 69-287
Cow position: chr6:67213932-67213721 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 198, 96

Conread position: 70-270
Cow position: chr6:12629508-12629318 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 97

Conread position: 70-271
Cow position: chr6:62326830-62326634 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 71-271
Cow position: chr6:43187669-43187473 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 99

Conread position: 72-271
Cow position: chr6:21856820-21857008 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 72-271
Cow position: chr6:31941422-31941231 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 72-271
Cow position: chr6:35601232-35601042 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 75-270
Cow position: chr6:68047371-68047553 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 81-271
Cow position: chr6:25790171-25790353 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 84-271
Cow position: chr6:917597-917422 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 84-271
Cow position: chr6:27150641-27150820 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 85-271
Cow position: chr6:28549496-28549672 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 87-271
Cow position: chr6:32287094-32286915 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 88-270
Cow position: chr6:32269720-32269889 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 88-271
Cow position: chr6:21588521-21588348 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 88-271
Cow position: chr6:55593609-55593434 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 89-267
Cow position: chr6:4865962-4866131 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 93-271
Cow position: chr6:32018570-32018738 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 104-271
Cow position: chr6:25373862-25374021 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 116-271
Cow position: chr6:7105019-7105170 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 118-240
Cow position: chr6:22333084-22333200 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 125-271
Cow position: chr6:2618063-2618202 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 130-271
Cow position: chr6:508024-508157 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 135-271
Cow position: chr6:52249016-52249150 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.