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Cow genome map

           
Conread name:
           
Spl1-SPL01A070046
        

               
Conread position:
               
352-635
               

               
Cow position:
               
chr22:3301092-3301385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
364-654
               

               
Cow position:
               
chr22:16533305-16533010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
367-549
               

               
Cow position:
               
chr22:12207481-12207662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
368-581
               

               
Cow position:
               
chr22:3730448-3730665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
368-651
               

               
Cow position:
               
chr22:12157614-12157906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
369-654
               

               
Cow position:
               
chr22:1309512-1309794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
379-561
               

               
Cow position:
               
chr22:24047403-24047579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
379-639
               

               
Cow position:
               
chr22:21527128-21526869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
379-643
               

               
Cow position:
               
chr22:17152906-17152625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
380-627
               

               
Cow position:
               
chr22:14141130-14141381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
380-651
               

               
Cow position:
               
chr22:24066029-24066299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
380-655
               

               
Cow position:
               
chr22:39602502-39602213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
381-606
               

               
Cow position:
               
chr22:44741285-44741059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
381-654
               

               
Cow position:
               
chr22:12929060-12929340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
382-585
               

               
Cow position:
               
chr22:33031022-33030802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
382-655
               

               
Cow position:
               
chr22:20627041-20626772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
383-627
               

               
Cow position:
               
chr22:30697364-30697117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
383-635
               

               
Cow position:
               
chr22:13866880-13866616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
383-656
               

               
Cow position:
               
chr22:26786572-26786286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
384-579
               

               
Cow position:
               
chr22:3693548-3693342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
384-621
               

               
Cow position:
               
chr22:43398210-43397970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
384-633
               

               
Cow position:
               
chr22:12902643-12902892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
384-638
               

               
Cow position:
               
chr22:899044-898792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
384-652
               

               
Cow position:
               
chr22:13957433-13957711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
384-657
               

               
Cow position:
               
chr22:4563570-4563290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
384-660
               

               
Cow position:
               
chr22:1588505-1588224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
385-560
               

               
Cow position:
               
chr22:45788820-45788643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
385-585
               

               
Cow position:
               
chr22:26189082-26188874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
385-621
               

               
Cow position:
               
chr22:32327011-32326766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
386-560
               

               
Cow position:
               
chr22:3388937-3388774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
386-560
               

               
Cow position:
               
chr22:13951473-13951296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
386-573
               

               
Cow position:
               
chr22:9735476-9735285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
386-594
               

               
Cow position:
               
chr22:6359987-6360189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
386-613
               

               
Cow position:
               
chr22:26233848-26233609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 223
               

               
Conread position:
               
386-620
               

               
Cow position:
               
chr22:33399279-33399518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
386-633
               

               
Cow position:
               
chr22:23372650-23372908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
386-636
               

               
Cow position:
               
chr22:7496898-7497157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
386-639
               

               
Cow position:
               
chr22:10295237-10294987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
386-639
               

               
Cow position:
               
chr22:39507829-39508092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
386-644
               

               
Cow position:
               
chr22:8412739-8412473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
387-583
               

               
Cow position:
               
chr22:27580212-27580407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
387-612
               

               
Cow position:
               
chr22:24542572-24542339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
387-651
               

               
Cow position:
               
chr22:4373246-4372974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
387-677
               

               
Cow position:
               
chr22:1501090-1500800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
388-550
               

               
Cow position:
               
chr22:29546844-29546681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-556
               

               
Cow position:
               
chr22:43730490-43730322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
388-557
               

               
Cow position:
               
chr22:11790193-11790019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-560
               

               
Cow position:
               
chr22:1991810-1991632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
388-560
               

               
Cow position:
               
chr22:2201941-2201773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
388-560
               

               
Cow position:
               
chr22:3257459-3257629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
388-560
               

               
Cow position:
               
chr22:27401940-27401770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
388-561
               

               
Cow position:
               
chr22:3540912-3541086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
388-561
               

               
Cow position:
               
chr22:7082236-7082058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
388-573
               

               
Cow position:
               
chr22:35627557-35627368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
388-581
               

               
Cow position:
               
chr22:1959447-1959247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
388-583
               

               
Cow position:
               
chr22:6203157-6202954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
388-585
               

               
Cow position:
               
chr22:7518761-7518559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-599
               

               
Cow position:
               
chr22:1821382-1821595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
388-606
               

               
Cow position:
               
chr22:14488147-14487918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 217
               

               
Conread position:
               
388-611
               

               
Cow position:
               
chr22:31510152-31510402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
388-616
               

               
Cow position:
               
chr22:26112574-26112339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-619
               

               
Cow position:
               
chr22:243309-243083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-620
               

               
Cow position:
               
chr22:6709582-6709823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
388-620
               

               
Cow position:
               
chr22:31195263-31195024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
388-623
               

               
Cow position:
               
chr22:35215758-35215512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-624
               

               
Cow position:
               
chr22:1776270-1776024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
388-630
               

               
Cow position:
               
chr22:25221697-25221936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
388-633
               

               
Cow position:
               
chr22:33985598-33985844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
388-634
               

               
Cow position:
               
chr22:27681931-27681672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-634
               

               
Cow position:
               
chr22:36432766-36433015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
388-635
               

               
Cow position:
               
chr22:33447871-33448126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-637
               

               
Cow position:
               
chr22:3987730-3987469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
388-639
               

               
Cow position:
               
chr22:864323-864567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
388-639
               

               
Cow position:
               
chr22:10122575-10122327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-639
               

               
Cow position:
               
chr22:32892903-32892643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
388-642
               

               
Cow position:
               
chr22:18838457-18838197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-651
               

               
Cow position:
               
chr22:24903800-24903526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
388-651
               

               
Cow position:
               
chr22:25247116-25246852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-651
               

               
Cow position:
               
chr22:28071765-28071494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-654
               

               
Cow position:
               
chr22:37139635-37139367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
388-655
               

               
Cow position:
               
chr22:4357293-4357029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
388-657
               

               
Cow position:
               
chr22:10684891-10685158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
388-660
               

               
Cow position:
               
chr22:18259423-18259151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
388-682
               

               
Cow position:
               
chr22:43812233-43812515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
389-560
               

               
Cow position:
               
chr22:33565894-33566061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
389-561
               

               
Cow position:
               
chr22:6149181-6149359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
389-613
               

               
Cow position:
               
chr22:11189235-11189008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
389-628
               

               
Cow position:
               
chr22:6215351-6215595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
389-635
               

               
Cow position:
               
chr22:10416432-10416181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
389-636
               

               
Cow position:
               
chr22:5016696-5016454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
389-639
               

               
Cow position:
               
chr22:2100743-2100997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
389-657
               

               
Cow position:
               
chr22:22613308-22613035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
390-584
               

               
Cow position:
               
chr22:35533022-35533227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
390-621
               

               
Cow position:
               
chr22:34726878-34726635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
390-629
               

               
Cow position:
               
chr22:8418668-8418421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
390-639
               

               
Cow position:
               
chr22:25742761-25743001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
390-644
               

               
Cow position:
               
chr22:23735804-23736068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
390-651
               

               
Cow position:
               
chr22:3250775-3251056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
390-652
               

               
Cow position:
               
chr22:23358359-23358087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
390-659
               

               
Cow position:
               
chr22:22013954-22013678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
391-591
               

               
Cow position:
               
chr22:45683829-45684040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
391-604
               

               
Cow position:
               
chr22:16813999-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
392-575
               

               
Cow position:
               
chr22:30615934-30615748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
392-594
               

               
Cow position:
               
chr22:1523425-1523213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
392-605
               

               
Cow position:
               
chr22:12829406-12829628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
392-625
               

               
Cow position:
               
chr22:28357230-28356993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
392-635
               

               
Cow position:
               
chr22:3842833-3842574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
392-639
               

               
Cow position:
               
chr22:34441430-34441687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
392-651
               

               
Cow position:
               
chr22:45808032-45807777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
393-633
               

               
Cow position:
               
chr22:23675771-23676008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
394-599
               

               
Cow position:
               
chr22:23780372-23780578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
171, 86
               

               
Conread position:
               
394-624
               

               
Cow position:
               
chr22:38115384-38115158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
395-557
               

               
Cow position:
               
chr22:23762652-23762815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
395-560
               

               
Cow position:
               
chr22:18145735-18145569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr22:12637801-12637618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
395-621
               

               
Cow position:
               
chr22:6176082-6176317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
395-629
               

               
Cow position:
               
chr22:3937262-3937013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
395-635
               

               
Cow position:
               
chr22:30818409-30818166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
395-639
               

               
Cow position:
               
chr22:15950190-15950433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
395-643
               

               
Cow position:
               
chr22:15737432-15737178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
115, 94
               

               
Conread position:
               
396-595
               

               
Cow position:
               
chr22:4628761-4628547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
396-606
               

               
Cow position:
               
chr22:1065306-1065088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
396-611
               

               
Cow position:
               
chr22:7967895-7967686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
396-627
               

               
Cow position:
               
chr22:41970954-41971192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
396-655
               

               
Cow position:
               
chr22:32698964-32698697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
396-659
               

               
Cow position:
               
chr22:15490854-15490585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
397-560
               

               
Cow position:
               
chr22:21041957-21042113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
397-560
               

               
Cow position:
               
chr22:26945373-26945527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 18
               

               
Conread position:
               
397-605
               

               
Cow position:
               
chr22:6754065-6754283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
397-607
               

               
Cow position:
               
chr22:23277536-23277337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
397-610
               

               
Cow position:
               
chr22:33485427-33485637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr22:8357776-8357552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
397-621
               

               
Cow position:
               
chr22:14214169-14214398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
397-627
               

               
Cow position:
               
chr22:44717922-44717678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
397-633
               

               
Cow position:
               
chr22:23980009-23980252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
397-647
               

               
Cow position:
               
chr22:6096818-6097073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
397-651
               

               
Cow position:
               
chr22:40072159-40071912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
397-655
               

               
Cow position:
               
chr22:27577943-27577675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
397-657
               

               
Cow position:
               
chr22:1659365-1659091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
397-657
               

               
Cow position:
               
chr22:40048756-40048483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
398-576
               

               
Cow position:
               
chr22:2704498-2704311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
398-612
               

               
Cow position:
               
chr22:21905665-21905449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
398-620
               

               
Cow position:
               
chr22:27171072-27171297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
398-624
               

               
Cow position:
               
chr22:5712781-5712553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
398-629
               

               
Cow position:
               
chr22:4583758-4583520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
398-631
               

               
Cow position:
               
chr22:24134126-24134366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
398-633
               

               
Cow position:
               
chr22:28371128-28370903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
398-633
               

               
Cow position:
               
chr22:29642311-29642070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
398-639
               

               
Cow position:
               
chr22:30699362-30699128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
398-654
               

               
Cow position:
               
chr22:17949780-17950035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
398-655
               

               
Cow position:
               
chr22:8883209-8882948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
398-655
               

               
Cow position:
               
chr22:9372725-9372453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 243
               

               
Conread position:
               
399-533
               

               
Cow position:
               
chr22:13891771-13891635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-558
               

               
Cow position:
               
chr22:10594806-10594643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-559
               

               
Cow position:
               
chr22:30684920-30684762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
399-560
               

               
Cow position:
               
chr22:1105432-1105591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
399-560
               

               
Cow position:
               
chr22:8480305-8480136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-560
               

               
Cow position:
               
chr22:23265451-23265619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
399-560
               

               
Cow position:
               
chr22:24890416-24890254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-574
               

               
Cow position:
               
chr22:1384269-1384097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
399-576
               

               
Cow position:
               
chr22:1304359-1304541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
399-584
               

               
Cow position:
               
chr22:12777188-12777372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
399-585
               

               
Cow position:
               
chr22:8447103-8446920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-606
               

               
Cow position:
               
chr22:2876602-2876814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr22:8090339-8090557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr22:10567523-10567744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
399-619
               

               
Cow position:
               
chr22:33948781-33949001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-620
               

               
Cow position:
               
chr22:5616491-5616271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
399-620
               

               
Cow position:
               
chr22:18926552-18926325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
399-621
               

               
Cow position:
               
chr22:1326614-1326389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
399-621
               

               
Cow position:
               
chr22:1984053-1983815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
399-622
               

               
Cow position:
               
chr22:40349537-40349311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
399-623
               

               
Cow position:
               
chr22:1289334-1289562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-627
               

               
Cow position:
               
chr22:4656850-4657081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-627
               

               
Cow position:
               
chr22:8324444-8324201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-627
               

               
Cow position:
               
chr22:28672330-28672103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
399-635
               

               
Cow position:
               
chr22:3325783-3325539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
399-635
               

               
Cow position:
               
chr22:5595612-5595855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
399-635
               

               
Cow position:
               
chr22:8733150-8733384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-638
               

               
Cow position:
               
chr22:8138059-8138315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-639
               

               
Cow position:
               
chr22:1871306-1871045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
399-639
               

               
Cow position:
               
chr22:4054407-4054636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-639
               

               
Cow position:
               
chr22:11613622-11613375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-639
               

               
Cow position:
               
chr22:17852442-17852685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-643
               

               
Cow position:
               
chr22:6720885-6721134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-644
               

               
Cow position:
               
chr22:7165164-7164909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
399-644
               

               
Cow position:
               
chr22:11601231-11600983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-644
               

               
Cow position:
               
chr22:17652628-17652378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
399-644
               

               
Cow position:
               
chr22:43131358-43131614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
399-651
               

               
Cow position:
               
chr22:30999086-30998821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
399-654
               

               
Cow position:
               
chr22:12573401-12573142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
399-654
               

               
Cow position:
               
chr22:12678225-12678486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
399-654
               

               
Cow position:
               
chr22:39215416-39215682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
399-656
               

               
Cow position:
               
chr22:10338910-10339185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-657
               

               
Cow position:
               
chr22:4060752-4061016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-657
               

               
Cow position:
               
chr22:12981529-12981793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
399-657
               

               
Cow position:
               
chr22:16094710-16094972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
399-657
               

               
Cow position:
               
chr22:18020835-18021099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
399-657
               

               
Cow position:
               
chr22:42618191-42617928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
399-659
               

               
Cow position:
               
chr22:38438962-38439230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
399-660
               

               
Cow position:
               
chr22:15567826-15568091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
399-660
               

               
Cow position:
               
chr22:41982522-41982792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
400-560
               

               
Cow position:
               
chr22:1045991-1046159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
400-607
               

               
Cow position:
               
chr22:24071462-24071664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
400-625
               

               
Cow position:
               
chr22:27274494-27274734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
400-629
               

               
Cow position:
               
chr22:14372362-14372139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
401-635
               

               
Cow position:
               
chr22:14178638-14178871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
401-651
               

               
Cow position:
               
chr22:285173-285422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
401-651
               

               
Cow position:
               
chr22:21397722-21397968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
402-634
               

               
Cow position:
               
chr22:11697002-11697240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
402-651
               

               
Cow position:
               
chr22:1651682-1651430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
402-651
               

               
Cow position:
               
chr22:41898256-41898510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
403-604
               

               
Cow position:
               
chr22:7584051-7584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
403-621
               

               
Cow position:
               
chr22:8287372-8287155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
403-629
               

               
Cow position:
               
chr22:37202040-37201809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
403-631
               

               
Cow position:
               
chr22:26056675-26056907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
403-639
               

               
Cow position:
               
chr22:23249545-23249778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
403-657
               

               
Cow position:
               
chr22:25361669-25361417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
404-617
               

               
Cow position:
               
chr22:4164170-4163951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
404-621
               

               
Cow position:
               
chr22:530387-530601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
404-651
               

               
Cow position:
               
chr22:14245247-14245507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
405-638
               

               
Cow position:
               
chr22:42635242-42635484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
405-654
               

               
Cow position:
               
chr22:10609548-10609288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
408-604
               

               
Cow position:
               
chr22:8710185-8710388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
410-605
               

               
Cow position:
               
chr22:16724501-16724703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
410-639
               

               
Cow position:
               
chr22:6327587-6327821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
411-560
               

               
Cow position:
               
chr22:29135141-29134991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
411-627
               

               
Cow position:
               
chr22:10532679-10532462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
411-633
               

               
Cow position:
               
chr22:21890180-21890400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
411-635
               

               
Cow position:
               
chr22:31599618-31599392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
411-646
               

               
Cow position:
               
chr22:2404066-2403828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
412-605
               

               
Cow position:
               
chr22:12389287-12389083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
414-643
               

               
Cow position:
               
chr22:4315815-4315574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
416-560
               

               
Cow position:
               
chr22:16655559-16655705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
416-607
               

               
Cow position:
               
chr22:43237229-43237426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
417-560
               

               
Cow position:
               
chr22:27066563-27066411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
417-562
               

               
Cow position:
               
chr22:755673-755816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
417-599
               

               
Cow position:
               
chr22:14378512-14378702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
417-629
               

               
Cow position:
               
chr22:10936669-10936884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
417-643
               

               
Cow position:
               
chr22:31646663-31646435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
417-644
               

               
Cow position:
               
chr22:28146862-28146618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
417-651
               

               
Cow position:
               
chr22:7882730-7882490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
417-657
               

               
Cow position:
               
chr22:10631568-10631314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
417-658
               

               
Cow position:
               
chr22:11370412-11370660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 185
               

               
Conread position:
               
418-557
               

               
Cow position:
               
chr22:26931040-26930898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
418-621
               

               
Cow position:
               
chr22:26166439-26166653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 175
               

               
Conread position:
               
418-635
               

               
Cow position:
               
chr22:40789736-40789520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
418-639
               

               
Cow position:
               
chr22:9171581-9171355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
424-622
               

               
Cow position:
               
chr22:30253386-30253167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
424-639
               

               
Cow position:
               
chr22:1026073-1025837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
424-647
               

               
Cow position:
               
chr22:15668313-15668521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
424-651
               

               
Cow position:
               
chr22:2109460-2109686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
428-628
               

               
Cow position:
               
chr22:16806753-16806555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
428-639
               

               
Cow position:
               
chr22:12803222-12803437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
428-651
               

               
Cow position:
               
chr22:14365786-14366020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
428-654
               

               
Cow position:
               
chr22:9597419-9597646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
428-655
               

               
Cow position:
               
chr22:47556019-47555785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 198
               

               
Conread position:
               
428-657
               

               
Cow position:
               
chr22:29289983-29290211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
432-639
               

               
Cow position:
               
chr22:4119401-4119614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
432-657
               

               
Cow position:
               
chr22:17224506-17224739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
432-670
               

               
Cow position:
               
chr22:1349994-1349741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
434-656
               

               
Cow position:
               
chr22:1067754-1067982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
450-635
               

               
Cow position:
               
chr22:14690825-14691015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 176
               

               
Conread position:
               
457-639
               

               
Cow position:
               
chr22:846043-845851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
457-639
               

               
Cow position:
               
chr22:2623384-2623569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
459-651
               

               
Cow position:
               
chr22:13300544-13300348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
463-618
               

               
Cow position:
               
chr22:25387457-25387298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
464-583
               

               
Cow position:
               
chr22:31309013-31308890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
464-620
               

               
Cow position:
               
chr22:27431574-27431732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
464-621
               

               
Cow position:
               
chr22:1977880-1977717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
464-627
               

               
Cow position:
               
chr22:23036296-23036126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
464-633
               

               
Cow position:
               
chr22:34104543-34104716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
464-635
               

               
Cow position:
               
chr22:3950381-3950207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
464-635
               

               
Cow position:
               
chr22:17764507-17764335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
464-639
               

               
Cow position:
               
chr22:4017602-4017427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
464-651
               

               
Cow position:
               
chr22:14881994-14882178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
464-654
               

               
Cow position:
               
chr22:10553556-10553751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
464-654
               

               
Cow position:
               
chr22:16044287-16044485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
464-657
               

               
Cow position:
               
chr22:3317251-3317050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
465-614
               

               
Cow position:
               
chr22:12974042-12974193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
465-652
               

               
Cow position:
               
chr22:21295595-21295790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
467-637
               

               
Cow position:
               
chr22:23440170-23440344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr22:18941873-18941664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
470-656
               

               
Cow position:
               
chr22:21502867-21502674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
471-639
               

               
Cow position:
               
chr22:8481764-8481593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
473-611
               

               
Cow position:
               
chr22:10324001-10323858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
474-652
               

               
Cow position:
               
chr22:21235315-21235498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
476-627
               

               
Cow position:
               
chr22:4149536-4149384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
480-639
               

               
Cow position:
               
chr22:4137537-4137701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
482-651
               

               
Cow position:
               
chr22:10315188-10315011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
483-607
               

               
Cow position:
               
chr22:4012627-4012501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
483-639
               

               
Cow position:
               
chr22:12341307-12341145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
484-639
               

               
Cow position:
               
chr22:26141384-26141226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
485-637
               

               
Cow position:
               
chr22:590448-590289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
485-639
               

               
Cow position:
               
chr22:12527013-12527172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
485-654
               

               
Cow position:
               
chr22:6936365-6936196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
490-657
               

               
Cow position:
               
chr22:4645875-4645703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 37
               
Show alignments to all cow chromosomes.