Cow genome map
| Conread name: | Spl1-SPL01A090103 |
| Conread position: | 458-738 |
| Cow position: | chr15:10479511-10479778 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 458-738 |
| Cow position: | chr15:21816564-21816835 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 459-656 |
| Cow position: | chr15:370504-370696 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 459-704 |
| Cow position: | chr15:15266609-15266851 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 459-736 |
| Cow position: | chr15:1236612-1236337 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 190 |
| Conread position: | 460-694 |
| Cow position: | chr15:36627426-36627659 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 460-703 |
| Cow position: | chr15:12614248-12614016 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 460-704 |
| Cow position: | chr15:21448252-21448014 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 460-738 |
| Cow position: | chr15:38957852-38958115 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 469-643 |
| Cow position: | chr15:32680389-32680564 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 469-663 |
| Cow position: | chr15:52635333-52635140 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 470-665 |
| Cow position: | chr15:35681478-35681670 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 183, 8 |
| Conread position: | 474-650 |
| Cow position: | chr15:53338221-53338043 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 489-701 |
| Cow position: | chr15:40104609-40104400 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 152, 46 |
| Conread position: | 489-706 |
| Cow position: | chr15:32605673-32605881 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 169, 80 |
| Conread position: | 490-643 |
| Cow position: | chr15:3038328-3038481 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-656 |
| Cow position: | chr15:36648090-36647923 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 492-635 |
| Cow position: | chr15:35649057-35649196 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 519-716 |
| Cow position: | chr15:51799604-51799410 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 532-707 |
| Cow position: | chr15:27064940-27065108 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.