Cow genome map
| Conread name: | Spl1-SPL01A090103 |
| Conread position: | 453-704 |
| Cow position: | chr3:15177781-15177532 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 185 |
| Conread position: | 458-704 |
| Cow position: | chr3:19692635-19692870 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 458-704 |
| Cow position: | chr3:26948791-26948542 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 458-738 |
| Cow position: | chr3:14755041-14755313 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 458-738 |
| Cow position: | chr3:36099254-36099527 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 458-738 |
| Cow position: | chr3:48329871-48329602 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 126, 32 |
| Conread position: | 459-656 |
| Cow position: | chr3:6684909-6684717 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 460-737 |
| Cow position: | chr3:64358715-64358988 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 464-685 |
| Cow position: | chr3:31354780-31355000 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 466-703 |
| Cow position: | chr3:34093943-34094178 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 469-640 |
| Cow position: | chr3:17951112-17950940 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 469-646 |
| Cow position: | chr3:52865309-52865488 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 469-704 |
| Cow position: | chr3:50011859-50011629 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 163 |
| Conread position: | 471-658 |
| Cow position: | chr3:24592166-24592351 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 474-643 |
| Cow position: | chr3:2909639-2909811 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 160 |
| Conread position: | 480-704 |
| Cow position: | chr3:18357434-18357658 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 136 |
| Conread position: | 482-704 |
| Cow position: | chr3:52861314-52861091 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 6, 156 |
| Conread position: | 489-669 |
| Cow position: | chr3:54782986-54782810 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 489-678 |
| Cow position: | chr3:21945978-21946165 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 495-661 |
| Cow position: | chr3:19801839-19801676 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 498-650 |
| Cow position: | chr3:39326115-39325964 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 515-728 |
| Cow position: | chr3:80871140-80870932 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 550-704 |
| Cow position: | chr3:14587697-14587544 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 550-707 |
| Cow position: | chr3:3979767-3979613 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.