Cow genome map


           Conread name:
           Spl1-SPL01A090103
        

               Conread position:
               458-704
               

               Cow position:
               chr8:45693608-45693853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               458-727
               

               Cow position:
               chr8:53427105-53426839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               34, 195
               

               Conread position:
               460-693
               

               Cow position:
               chr8:8904726-8904956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               460-738
               

               Cow position:
               chr8:42467168-42466906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               463-640
               

               Cow position:
               chr8:42161880-42162059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               465-706
               

               Cow position:
               chr8:13735418-13735181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 134
               

               Conread position:
               470-657
               

               Cow position:
               chr8:19229566-19229377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               470-685
               

               Cow position:
               chr8:11590401-11590195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               473-671
               

               Cow position:
               chr8:38607765-38607961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               489-702
               

               Cow position:
               chr8:23766604-23766811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               500-694
               

               Cow position:
               chr8:46945427-46945624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 175
               

               Conread position:
               510-738
               

               Cow position:
               chr8:25542326-25542113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.