Cow genome map
| Conread name: | Spl1-SPL01B040095 |
| Conread position: | 64-315 |
| Cow position: | chr11:61675375-61675624 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 79-361 |
| Cow position: | chr11:4637254-4636971 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 168 |
| Conread position: | 82-352 |
| Cow position: | chr11:40818715-40818438 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 183 |
| Conread position: | 83-217 |
| Cow position: | chr11:54218640-54218772 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 83-222 |
| Cow position: | chr11:10620407-10620265 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 83-249 |
| Cow position: | chr11:10213642-10213479 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 83-249 |
| Cow position: | chr11:28168501-28168333 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 83-249 |
| Cow position: | chr11:35874081-35873913 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 83-249 |
| Cow position: | chr11:55494601-55494769 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 83-249 |
| Cow position: | chr11:63469798-63469965 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 96 |
| Conread position: | 83-263 |
| Cow position: | chr11:47545054-47545238 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 83-264 |
| Cow position: | chr11:16342307-16342124 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 83-264 |
| Cow position: | chr11:30354981-30355161 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 83-265 |
| Cow position: | chr11:44636834-44636651 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 83-265 |
| Cow position: | chr11:59702408-59702595 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 173 |
| Conread position: | 83-266 |
| Cow position: | chr11:35684571-35684397 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 83-273 |
| Cow position: | chr11:30954923-30955112 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 83-273 |
| Cow position: | chr11:33341223-33341032 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 83-273 |
| Cow position: | chr11:48272121-48272314 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 83-273 |
| Cow position: | chr11:69075832-69076022 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 83-273 |
| Cow position: | chr11:69119215-69119406 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 169 |
| Conread position: | 83-273 |
| Cow position: | chr11:83230473-83230289 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 83-274 |
| Cow position: | chr11:23586559-23586753 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 83-274 |
| Cow position: | chr11:26845671-26845482 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 163 |
| Conread position: | 83-274 |
| Cow position: | chr11:35803057-35803251 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 100 |
| Conread position: | 83-290 |
| Cow position: | chr11:28644008-28644214 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 164 |
| Conread position: | 83-303 |
| Cow position: | chr11:30867104-30867323 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 164 |
| Conread position: | 83-304 |
| Cow position: | chr11:3393288-3393067 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 128 |
| Conread position: | 83-304 |
| Cow position: | chr11:29960219-29960440 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 83-304 |
| Cow position: | chr11:39499277-39499502 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 83-304 |
| Cow position: | chr11:50152892-50152666 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 83-316 |
| Cow position: | chr11:24599466-24599237 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 128 |
| Conread position: | 83-316 |
| Cow position: | chr11:34121118-34121356 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 83-333 |
| Cow position: | chr11:27248416-27248666 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 83-333 |
| Cow position: | chr11:40608673-40608415 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 83-334 |
| Cow position: | chr11:2917662-2917414 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 83-334 |
| Cow position: | chr11:17676447-17676196 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 83-334 |
| Cow position: | chr11:30830692-30830444 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 160 |
| Conread position: | 83-334 |
| Cow position: | chr11:33409337-33409087 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 83-334 |
| Cow position: | chr11:35580181-35580440 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 83-334 |
| Cow position: | chr11:39060676-39060426 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 83-334 |
| Cow position: | chr11:42066782-42067043 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 83-334 |
| Cow position: | chr11:44031925-44032185 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 83-334 |
| Cow position: | chr11:45435004-45435254 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 83-334 |
| Cow position: | chr11:48544355-48544615 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 174 |
| Conread position: | 83-334 |
| Cow position: | chr11:49872963-49872708 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 83-334 |
| Cow position: | chr11:63999166-63998911 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 83-334 |
| Cow position: | chr11:67615323-67615073 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 83-334 |
| Cow position: | chr11:74316636-74316885 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 83-335 |
| Cow position: | chr11:17721881-17721621 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 83-337 |
| Cow position: | chr11:17036606-17036350 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 187 |
| Conread position: | 83-338 |
| Cow position: | chr11:26275033-26274783 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 54 |
| Conread position: | 83-342 |
| Cow position: | chr11:11125586-11125852 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 83-346 |
| Cow position: | chr11:42160137-42159871 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 83-348 |
| Cow position: | chr11:27746849-27747109 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 83-348 |
| Cow position: | chr11:80564216-80564490 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 83-349 |
| Cow position: | chr11:41098-41364 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 83-349 |
| Cow position: | chr11:48085839-48086115 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 166 |
| Conread position: | 83-349 |
| Cow position: | chr11:52297297-52297029 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 83-349 |
| Cow position: | chr11:67615005-67614733 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 174 |
| Conread position: | 83-350 |
| Cow position: | chr11:35153901-35153626 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 162 |
| Conread position: | 83-351 |
| Cow position: | chr11:30493922-30494184 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 83-351 |
| Cow position: | chr11:34646511-34646791 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 83-351 |
| Cow position: | chr11:62789052-62789323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 42, 168 |
| Conread position: | 83-361 |
| Cow position: | chr11:9270802-9270536 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 96 |
| Conread position: | 84-342 |
| Cow position: | chr11:21844210-21843952 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 86-230 |
| Cow position: | chr11:24937590-24937736 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 86-263 |
| Cow position: | chr11:43898066-43898240 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 86-266 |
| Cow position: | chr11:66424954-66424775 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 86-274 |
| Cow position: | chr11:20761773-20761955 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 86-290 |
| Cow position: | chr11:44234279-44234484 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 86-342 |
| Cow position: | chr11:51729214-51729461 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 86-346 |
| Cow position: | chr11:20238598-20238867 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 86-349 |
| Cow position: | chr11:35213243-35212979 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 87-202 |
| Cow position: | chr11:1779402-1779286 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 87-278 |
| Cow position: | chr11:47772465-47772275 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 155 |
| Conread position: | 87-306 |
| Cow position: | chr11:63866727-63866512 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 87-334 |
| Cow position: | chr11:23407389-23407639 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 87-335 |
| Cow position: | chr11:45646667-45646418 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 87-346 |
| Cow position: | chr11:80923396-80923136 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 87-351 |
| Cow position: | chr11:52380946-52380675 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 34, 214 |
| Conread position: | 88-243 |
| Cow position: | chr11:64406154-64406312 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 88-249 |
| Cow position: | chr11:13061308-13061145 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 88-273 |
| Cow position: | chr11:73924633-73924449 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 88-334 |
| Cow position: | chr11:62813024-62812773 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 15, 167 |
| Conread position: | 88-346 |
| Cow position: | chr11:37804627-37804361 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 89-288 |
| Cow position: | chr11:11558097-11558302 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 90-273 |
| Cow position: | chr11:48248286-48248102 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 90-274 |
| Cow position: | chr11:10363458-10363272 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 91-342 |
| Cow position: | chr11:44222817-44223068 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 91-344 |
| Cow position: | chr11:17083381-17083125 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 91-347 |
| Cow position: | chr11:1625294-1625031 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 92-274 |
| Cow position: | chr11:79019128-79018946 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 160 |
| Conread position: | 93-273 |
| Cow position: | chr11:29699768-29699585 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 93-342 |
| Cow position: | chr11:21728344-21728102 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 96-333 |
| Cow position: | chr11:25119997-25119758 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 97-316 |
| Cow position: | chr11:24601901-24602118 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 149 |
| Conread position: | 98-351 |
| Cow position: | chr11:80556162-80556415 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 100-343 |
| Cow position: | chr11:18851849-18852091 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 100-348 |
| Cow position: | chr11:46922947-46922694 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 147 |
| Conread position: | 107-328 |
| Cow position: | chr11:18447547-18447328 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 147 |
| Conread position: | 108-264 |
| Cow position: | chr11:2575959-2575799 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 110-241 |
| Cow position: | chr11:36329085-36328953 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 111-222 |
| Cow position: | chr11:42452981-42452873 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 111-265 |
| Cow position: | chr11:5414-5569 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 113-304 |
| Cow position: | chr11:11469695-11469506 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 113-334 |
| Cow position: | chr11:21885786-21886009 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 116-349 |
| Cow position: | chr11:897628-897857 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 8, 136 |
| Conread position: | 119-245 |
| Cow position: | chr11:18914983-18915112 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 119-316 |
| Cow position: | chr11:69977929-69978126 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 121-350 |
| Cow position: | chr11:83043402-83043172 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 123-329 |
| Cow position: | chr11:30895040-30894829 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 131-348 |
| Cow position: | chr11:55052842-55053053 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 133-334 |
| Cow position: | chr11:20205879-20205679 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 144-350 |
| Cow position: | chr11:15017041-15017253 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 145-348 |
| Cow position: | chr11:3175659-3175860 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 102 |
| Conread position: | 145-349 |
| Cow position: | chr11:31227948-31228147 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 147-324 |
| Cow position: | chr11:48315409-48315230 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 106 |
| Conread position: | 157-333 |
| Cow position: | chr11:6256005-6255831 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 157-342 |
| Cow position: | chr11:2484797-2484609 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 167-334 |
| Cow position: | chr11:4621422-4621256 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 139, 8 |
Show alignments to all cow chromosomes.