Cow genome map
| Conread name: | Spl1-SPL01B040095 |
| Conread position: | 83-217 |
| Cow position: | chr14:3162829-3162694 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 83-220 |
| Cow position: | chr14:2345170-2345031 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 83-256 |
| Cow position: | chr14:41837771-41837944 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 83-261 |
| Cow position: | chr14:16256869-16256684 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 170 |
| Conread position: | 83-261 |
| Cow position: | chr14:19372442-19372264 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 83-265 |
| Cow position: | chr14:19863332-19863513 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 83-266 |
| Cow position: | chr14:19359996-19359807 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 178 |
| Conread position: | 83-275 |
| Cow position: | chr14:26433139-26433333 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 188 |
| Conread position: | 83-281 |
| Cow position: | chr14:24796331-24796531 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 83-285 |
| Cow position: | chr14:33751637-33751437 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 109 |
| Conread position: | 83-328 |
| Cow position: | chr14:48427174-48426925 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 83-334 |
| Cow position: | chr14:18345629-18345877 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 83-335 |
| Cow position: | chr14:33791287-33791039 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 83-341 |
| Cow position: | chr14:45677333-45677071 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 83-347 |
| Cow position: | chr14:7636394-7636665 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 83-349 |
| Cow position: | chr14:20640526-20640797 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 83-349 |
| Cow position: | chr14:42154863-42155136 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 83-350 |
| Cow position: | chr14:16524577-16524296 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 16, 245 |
| Conread position: | 83-357 |
| Cow position: | chr14:41749660-41749933 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 223, 13 |
| Conread position: | 84-267 |
| Cow position: | chr14:19959633-19959817 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 86-269 |
| Cow position: | chr14:29632786-29632963 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 86-274 |
| Cow position: | chr14:41486162-41486348 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 86-334 |
| Cow position: | chr14:47170256-47170503 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 86-343 |
| Cow position: | chr14:24945391-24945656 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 87-279 |
| Cow position: | chr14:24527064-24527255 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 141 |
| Conread position: | 87-316 |
| Cow position: | chr14:20110623-20110856 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 87-333 |
| Cow position: | chr14:25225828-25225580 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 87-342 |
| Cow position: | chr14:33714580-33714835 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 87-349 |
| Cow position: | chr14:13042853-13042591 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 88-304 |
| Cow position: | chr14:16760498-16760278 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 89-261 |
| Cow position: | chr14:10078364-10078192 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 162 |
| Conread position: | 91-266 |
| Cow position: | chr14:25334152-25333978 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 91-328 |
| Cow position: | chr14:11643161-11643393 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 93-274 |
| Cow position: | chr14:15054898-15055079 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 96-249 |
| Cow position: | chr14:10852120-10851966 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 102-349 |
| Cow position: | chr14:13846066-13845822 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 106-273 |
| Cow position: | chr14:2833325-2833496 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 107-307 |
| Cow position: | chr14:12924380-12924182 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 107-342 |
| Cow position: | chr14:43868387-43868145 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 107-349 |
| Cow position: | chr14:20826569-20826323 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 110-342 |
| Cow position: | chr14:25903606-25903371 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 36, 135 |
| Conread position: | 118-273 |
| Cow position: | chr14:18302028-18301873 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 119-327 |
| Cow position: | chr14:10706941-10706732 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 120-248 |
| Cow position: | chr14:2038743-2038872 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 124-351 |
| Cow position: | chr14:36254635-36254857 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 150-273 |
| Cow position: | chr14:28707081-28706958 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-349 |
| Cow position: | chr14:20736644-20736446 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 119, 84 |
| Conread position: | 165-316 |
| Cow position: | chr14:11280094-11280248 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 103, 89 |
Show alignments to all cow chromosomes.